Click here to switch to the map view.

The map label for this gene is 89885942

Identifier: 89885942

GI number: 89885942

Start: 211928

End: 212212

Strand: Reverse

Name: 89885942

Synonym: Rfer_4456

Alternate gene names: NA

Gene position: 212212-211928 (Counterclockwise)

Preceding gene: 89885943

Following gene: 89885941

Centisome position: 82.43

GC content: 57.54

Gene sequence:

>285_bases
ATGAACCTGACAAAAAAACAGGTGCTTGCAGTACAGAAGGTGGGATTGGCAGTGCTTGAGGCCATCCAGGCGGCCGGCGA
ATTGGGGGCGCCATCGGGGGCTCTGTATGCTGCGTTGCAGCATCAGGGCTGCACATTGACCCAGTACCAGTCCCTCACAG
GGTCCATGGAACGGCGGGGCTTTGTGATCCAGGAAAGCGACTGCTTCACCATCACCACTACTGGCGAACACTTCATCAGC
CAGTTGCGACGCACCGTTGCCATGGAAGATCCAGTGGAGGCTTAG

Upstream 100 bases:

>100_bases
CGGCGGCTCTACCCAACCCGCAGGGCACTCCAAGCCCTCAGGGCTGGTGCTCTCCACACGGGGAAATTCTGAAACACGAA
ATTGAAGGGATCGAATTGAA

Downstream 100 bases:

>100_bases
GCGTTCGCAAACGCTATCGCAGGATGCCCGGCAAAGCACCCATCTCAAAAACACAAGCCCCGCGCTGTCCTCAAAAGGAC
GGTGGCGGGGCTTTTTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MNLTKKQVLAVQKVGLAVLEAIQAAGELGAPSGALYAALQHQGCTLTQYQSLTGSMERRGFVIQESDCFTITTTGEHFIS
QLRRTVAMEDPVEA

Sequences:

>Translated_94_residues
MNLTKKQVLAVQKVGLAVLEAIQAAGELGAPSGALYAALQHQGCTLTQYQSLTGSMERRGFVIQESDCFTITTTGEHFIS
QLRRTVAMEDPVEA
>Mature_94_residues
MNLTKKQVLAVQKVGLAVLEAIQAAGELGAPSGALYAALQHQGCTLTQYQSLTGSMERRGFVIQESDCFTITTTGEHFIS
QLRRTVAMEDPVEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10127; Mature: 10127

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTKKQVLAVQKVGLAVLEAIQAAGELGAPSGALYAALQHQGCTLTQYQSLTGSMERRG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHCCHHHCC
FVIQESDCFTITTTGEHFISQLRRTVAMEDPVEA
EEEECCCEEEEEECHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNLTKKQVLAVQKVGLAVLEAIQAAGELGAPSGALYAALQHQGCTLTQYQSLTGSMERRG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHCCHHHCC
FVIQESDCFTITTTGEHFISQLRRTVAMEDPVEA
EEEECCCEEEEEECHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA