Click here to switch to the map view.

The map label for this gene is 89885923

Identifier: 89885923

GI number: 89885923

Start: 201014

End: 202354

Strand: Reverse

Name: 89885923

Synonym: Rfer_4437

Alternate gene names: NA

Gene position: 202354-201014 (Counterclockwise)

Preceding gene: 89885924

Following gene: 89885922

Centisome position: 78.6

GC content: 45.12

Gene sequence:

>1341_bases
TTGGTTAAGAGACTAAAAACGGCTGGGCCCAAGTTTCAGTTCGCAACGCATTTGCGAGCTGCGCAAAGGAAGGACCTCAC
TCTACCGGAGAGAGTGCTAAATGACTTCGCCAAGAAATATGAAGGGGTTTGGAAGCACACTGAGATAGTCAGAAAGGACC
CGGTGACTACGATGGGAGTAGATCGGTGGGAACCTTGGTGTTTCCTTCCATGGGGCTGCATGTCAGCGATTCTGGAGAGT
TACACCCGTCATAAATACACCTATGACGAAGCAATCAGGATTCAGAACAGTGATTCAAAACTTGGGACTGCGCTGTGCGC
ATGGCGAATGACCAAGGGGGTCTACCATTTTGATGATGAGATGCTCAAAGAATTGTGTTCTAGCTCTTTAAAAGACGAAG
TAGCGACTGAATTCTTGTTCAGGATGCCTGAGTGGGGTGTTTACATTTCAACGCCTGGGCTTGATTTGCATGAAGGCTTC
CGAATGCATGGATTCTTCGCAGTAGTAGATGACGAAGGGTCCGACAGAGGTTTGTTTGCACCAGTTTTAAGAATTGAAGT
AATTGTTGACCCACGAGGATGCAACGATTCGAATCTTCTGATGCTCCTGTCGATGGATCCAGATCTCATTATGGAAGCCG
AAGAAAAAATGGAGGCTGACCATTCGCTAACCGCTCTCGATGTGATTCCTAGAGATAAAGAATATCTAAGATTCAGCATT
TCGGTTCCATTGATTGGGAAAACAATAAGCGAGAGCCTGGAGATAAGCGAAAGAGAAAAAGCAGCGCAACGAGCAAAGCA
TGAAAAAGTAAGAAACAACCTTGTACCAATTGACTCTAAAAGTCAGGGGTACTTAGCGTCTGCTGAGATTGTTGAAGAAC
ACTTTTCCCCAGAACTTGACGACGAAACCAAGCAATTTATTGTTAACACGAACCTCTTGTTGATTAACATTTTAATGTAC
ATATGCTCTGATGAACCAGACATTCAAGGTGGAACAATAGGTGAACGAAAGGCCTCTGTTGTTAAAGCAGAAAAGGAAAA
GAAGAAAGTCTATAGCGCTGATCGAGTTACAGAATGGAACGTTGGTTTCAGAATAGGCGCCGATCTCCGTAAAGCAAAAG
AGGACTGGGAGAAAGAATCGGCGAGCGACGGCAATGGACCCAAAATGCGGCCCCACTTTCGTAAGTCACACTGGCATATG
TATTGGACGGGCCCCAAAGACAAGCCACAGAAGCATTGCTTCAAATGGTTGTGGCCGATTCCAGTGAATGTTAATAAAGC
AGATGACGTTATAACAACGGCTCATCTGGTGAGTAGTGGAATATATGGACGGTCAACCTAA

Upstream 100 bases:

>100_bases
CAAGTAGAGGAAATCATAGAAACTTGCGCGCCAACCAAACCCTGTAACCTGAACGCATCCACCAACAACTGAAAAAATCA
ATACGCGGAGGGAATCAAAA

Downstream 100 bases:

>100_bases
TCAAGGAAATCATGCCATGGGCGTCCAGAGAGCGATGTACGAAGTGAAGGCAATTCCATTGGCCAACGCGTGGGCGTATA
AAACCGCCTGTGAAAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MVKRLKTAGPKFQFATHLRAAQRKDLTLPERVLNDFAKKYEGVWKHTEIVRKDPVTTMGVDRWEPWCFLPWGCMSAILES
YTRHKYTYDEAIRIQNSDSKLGTALCAWRMTKGVYHFDDEMLKELCSSSLKDEVATEFLFRMPEWGVYISTPGLDLHEGF
RMHGFFAVVDDEGSDRGLFAPVLRIEVIVDPRGCNDSNLLMLLSMDPDLIMEAEEKMEADHSLTALDVIPRDKEYLRFSI
SVPLIGKTISESLEISEREKAAQRAKHEKVRNNLVPIDSKSQGYLASAEIVEEHFSPELDDETKQFIVNTNLLLINILMY
ICSDEPDIQGGTIGERKASVVKAEKEKKKVYSADRVTEWNVGFRIGADLRKAKEDWEKESASDGNGPKMRPHFRKSHWHM
YWTGPKDKPQKHCFKWLWPIPVNVNKADDVITTAHLVSSGIYGRST

Sequences:

>Translated_446_residues
MVKRLKTAGPKFQFATHLRAAQRKDLTLPERVLNDFAKKYEGVWKHTEIVRKDPVTTMGVDRWEPWCFLPWGCMSAILES
YTRHKYTYDEAIRIQNSDSKLGTALCAWRMTKGVYHFDDEMLKELCSSSLKDEVATEFLFRMPEWGVYISTPGLDLHEGF
RMHGFFAVVDDEGSDRGLFAPVLRIEVIVDPRGCNDSNLLMLLSMDPDLIMEAEEKMEADHSLTALDVIPRDKEYLRFSI
SVPLIGKTISESLEISEREKAAQRAKHEKVRNNLVPIDSKSQGYLASAEIVEEHFSPELDDETKQFIVNTNLLLINILMY
ICSDEPDIQGGTIGERKASVVKAEKEKKKVYSADRVTEWNVGFRIGADLRKAKEDWEKESASDGNGPKMRPHFRKSHWHM
YWTGPKDKPQKHCFKWLWPIPVNVNKADDVITTAHLVSSGIYGRST
>Mature_446_residues
MVKRLKTAGPKFQFATHLRAAQRKDLTLPERVLNDFAKKYEGVWKHTEIVRKDPVTTMGVDRWEPWCFLPWGCMSAILES
YTRHKYTYDEAIRIQNSDSKLGTALCAWRMTKGVYHFDDEMLKELCSSSLKDEVATEFLFRMPEWGVYISTPGLDLHEGF
RMHGFFAVVDDEGSDRGLFAPVLRIEVIVDPRGCNDSNLLMLLSMDPDLIMEAEEKMEADHSLTALDVIPRDKEYLRFSI
SVPLIGKTISESLEISEREKAAQRAKHEKVRNNLVPIDSKSQGYLASAEIVEEHFSPELDDETKQFIVNTNLLLINILMY
ICSDEPDIQGGTIGERKASVVKAEKEKKKVYSADRVTEWNVGFRIGADLRKAKEDWEKESASDGNGPKMRPHFRKSHWHM
YWTGPKDKPQKHCFKWLWPIPVNVNKADDVITTAHLVSSGIYGRST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51147; Mature: 51147

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRLKTAGPKFQFATHLRAAQRKDLTLPERVLNDFAKKYEGVWKHTEIVRKDPVTTMGV
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DRWEPWCFLPWGCMSAILESYTRHKYTYDEAIRIQNSDSKLGTALCAWRMTKGVYHFDDE
CCCCCEEEECHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEECCHH
MLKELCSSSLKDEVATEFLFRMPEWGVYISTPGLDLHEGFRMHGFFAVVDDEGSDRGLFA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCCCEEEEEEEEEECCCCCCCEEE
PVLRIEVIVDPRGCNDSNLLMLLSMDPDLIMEAEEKMEADHSLTALDVIPRDKEYLRFSI
EEEEEEEEECCCCCCCCCEEEEEECCCHHHHCCHHHHCCCCCEEEEEECCCCCHHEEEEE
SVPLIGKTISESLEISEREKAAQRAKHEKVRNNLVPIDSKSQGYLASAEIVEEHFSPELD
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
DETKQFIVNTNLLLINILMYICSDEPDIQGGTIGERKASVVKAEKEKKKVYSADRVTEWN
CCHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECC
VGFRIGADLRKAKEDWEKESASDGNGPKMRPHFRKSHWHMYWTGPKDKPQKHCFKWLWPI
CCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHEECCC
PVNVNKADDVITTAHLVSSGIYGRST
CCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVKRLKTAGPKFQFATHLRAAQRKDLTLPERVLNDFAKKYEGVWKHTEIVRKDPVTTMGV
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DRWEPWCFLPWGCMSAILESYTRHKYTYDEAIRIQNSDSKLGTALCAWRMTKGVYHFDDE
CCCCCEEEECHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEECCHH
MLKELCSSSLKDEVATEFLFRMPEWGVYISTPGLDLHEGFRMHGFFAVVDDEGSDRGLFA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCCCEEEEEEEEEECCCCCCCEEE
PVLRIEVIVDPRGCNDSNLLMLLSMDPDLIMEAEEKMEADHSLTALDVIPRDKEYLRFSI
EEEEEEEEECCCCCCCCCEEEEEECCCHHHHCCHHHHCCCCCEEEEEECCCCCHHEEEEE
SVPLIGKTISESLEISEREKAAQRAKHEKVRNNLVPIDSKSQGYLASAEIVEEHFSPELD
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
DETKQFIVNTNLLLINILMYICSDEPDIQGGTIGERKASVVKAEKEKKKVYSADRVTEWN
CCHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECC
VGFRIGADLRKAKEDWEKESASDGNGPKMRPHFRKSHWHMYWTGPKDKPQKHCFKWLWPI
CCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHEECCC
PVNVNKADDVITTAHLVSSGIYGRST
CCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA