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The map label for this gene is 89885916

Identifier: 89885916

GI number: 89885916

Start: 195650

End: 198313

Strand: Reverse

Name: 89885916

Synonym: Rfer_4430

Alternate gene names: NA

Gene position: 198313-195650 (Counterclockwise)

Preceding gene: 89885917

Following gene: 89885915

Centisome position: 77.03

GC content: 53.57

Gene sequence:

>2664_bases
ATGAGTCAAAACGTAGGGGGAAGACCAAGAAACGATTCCGGTGGCGTGCAAGCGTCCGCTCGACTGAGAAGCCGTAGATT
GGATTTGGGCCTTACCAAGATCAAAGTGGCAAACGATATTGGCATTCCAAAGGGCAACTACGCCTACCTGGAACGCAACT
TCAGCGAACACCTGCAGAACAGGCACCTGGAAAAGCTCGCGATACTACTGAGCGCCCCTAAGGAATGGATTCGCACGGGG
GAGGGTGAACTTCCACCAGCATCGGAGCGAGCGAAGGATCCAGACCCTCCTCTGATAGAGGTCTTCACATCCGGAAACGA
GTGTGAAGTCGCAGTTCGCATAAGCATGAGGCGAACAGAAATGGGCATCACAAAACCTCAAATGGCGAAGGTACTGGAGA
TCGCCGTCAATAGCTATTCCTATCTGGAAAAGAGGTGCAGTCCAAAGGCCCAGAAGCGGCATGTTTCGGCCATTGCCTGC
GTATTGCATGCCTCCCAAGACTGGCTGCTGTACGGACAGGGCACGCCGCCGACCGTACCAGACATCAAATTACTCGCTGC
TGAGCTAGAGGCCCAGTCAGGGCCACAAAGTCCAGAGCTGCGAATCGTGCTCTCACAAAGGGCAAAGAAGAGACGAAAGG
CGCTTGGACTGAAGGTCCAAAAATGTGCCGAACAAATTGGAGTTTCAGAAGCAGAATTCAGCCAAATGGAATATTGCCTG
CGAGCGGTGGTGGATCAGCATGTCGAAGACTTGTGGGAAGGCGTGCTCAAAGTGCAGAATGGCTGGCTGCGCGACCCCCG
TGTGAATGAGACCGAACTCCCTTTAGCGTATTTGAACGGGGCCTACGTCAAGCGGTCGGCCCTGGCCACGCATGACCGAA
TAGCGCTGGCAGAGCGGGCCAAGAAGCGCAGGGTTGCCCTTGGCATGAAAGTGTCGGAGTGCGCCAGTGCGGCGGGGCTC
AACATGGCGAACTTCGCTCAAAACGAGAGAATTCTCAGGAAGTTCCCCGACATCGACGTTGAGGCCAAATGGGAAGCAGC
ATTGCTGGTGCCTGCGGGTTGGCTGCGCGATCAGACTATTGAAGCACTGCCGCTTGCATTTCCTGCGTCGGTGCTCATCC
CTGGATCGGCCTACGCTGCGGATGCGGTTGTGACATGGCATACCGTGTCCAAAGAGATCAGGGCGGCAGCCGCCTGGTTG
AGCCGAAAGGCAATTCTTCGCAGGACAACCGAATGGGGGCTCTTAACGCCCACTGAAAAGTCTTGGGCAGAGATATTTTC
GGTGCGCTATGGCGTTCAGGGGGAAGGCCAATCTACGCTTGAAAGTGGTGGCAAGAGAGTTGGCGTCACTCGGGAGAGAA
TCAGACAGATCGTGAAAAAGATGACCGAGAGGGCCGATGGTCTGAAGATGCCGACGCCAAGGCTCGATGAACTTGCCGTC
GAGATAAGTCGGCTAGCTCCGGCTACCGTTGCACAACTCGACATTGAACTGAAGCACAAGCTGGGTGAAGAGTTGACCAT
TCAAAGCGCGCAACGTTTCTCAGTTGAGATTTTCGGTAAAAAGTTGGCGAAATTCGCAAGCAGCCCATGGAGCCAGAACC
AATCCAACCTTGACCACGTACTCAAGTCGGGTTCGCAAATTGAAGATGACAGCCTGATCCGTAGCGCCAGATCAGTGGCC
CTGAAAATGATTCGTGGGAGTGGTGCCGCCAATATTCATTTTGTTTGCGGCGCTGTCTCTGATGAACTCGATACAGAGGT
CAGTATCAAGGAGGTTAAAACAGCGATTGAAATGGTGGACGGCTTTGAATGGCTGGCTGAGCCGGATGGCTGGTTCTGGT
TCGGGAACGATATTGGTGATAACCGGCTCCAGAACGTGACGAAGAAGGTAATGGCGGCGGCGGATCGCAAGGTGGACATT
GACGAGATCTACACAGCCATGGGACGGTCCCAGCGCGGCTATTACAAGGCAGACGACTCTAAGCCATTCGTCATAGAGGC
CCCCTCCGTAATCCTTGCCAAGGTTCTGCAGAGGACACCATGGCTAACGCGAATTCAAAAGAATGATTTTTTCGCTAACG
ATGAAACCGTGCTTCAAGGGGCCTTGTCAGATGTGGAAGCTGAAATCATCAAAGTGATCAGAGCGAACGATGGAGTGGCC
GTCAAATACGAAATTGATGCTCACGTTGACAGGACGCTGGACGTGACAACCATTGCAACGGCAAACGCGCTTGGCAAGTC
GCCCTGTTTTGTCCAACCGGCCAAAGGGATGTACTCTATTTGTGGGTGCGATATTGAACCGCATGCGCTGGCCCGTGCAG
CTTCATTTGCAGATTCATTGTTCAACAGAGGAACGAACGCGACAATAGACGACAAAGGCTATTTCACGTTCGAGTTTGAA
CTGAGCGAGTACCACACCAAACACAAGTTCATTGGCATGCCTGGGTCTCTCTCAAGGAAGCTATCGGCCGGCGAATATGC
GCTTGAAGATCAGGCTGCGCCTGCCTTTATCACAAAACGCGAATCAGGGCTGATTCTGCTTTCAAAGATGATGCCAAGGC
TTTCCCAGTTGAACGCCAAGGTGGGCGAATCATTCCGGTTGAGAATCAACCCGGAACGTATGGTGGCAAGCTTGCATAGG
GTGGAAGCGCGCAGCGCGCAATAG

Upstream 100 bases:

>100_bases
GGGTTGGGGTGTCGCTGATCGGGCTGAAGCGCTATGAGACGGATGTCAACGAACAACAAAACGACATGGCTTCCAAATGG
ATCGCCATTTAGGAAGATAA

Downstream 100 bases:

>100_bases
TCATGCAGATAACGATTGCGGCACTCTGTATTGCGCAGGCCTTGGACATGCACGAGTGCGGTGAAGCAGAGCTTGCCAGG
GTCTGGGAAAAAATTGAGCA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 887; Mature: 886

Protein sequence:

>887_residues
MSQNVGGRPRNDSGGVQASARLRSRRLDLGLTKIKVANDIGIPKGNYAYLERNFSEHLQNRHLEKLAILLSAPKEWIRTG
EGELPPASERAKDPDPPLIEVFTSGNECEVAVRISMRRTEMGITKPQMAKVLEIAVNSYSYLEKRCSPKAQKRHVSAIAC
VLHASQDWLLYGQGTPPTVPDIKLLAAELEAQSGPQSPELRIVLSQRAKKRRKALGLKVQKCAEQIGVSEAEFSQMEYCL
RAVVDQHVEDLWEGVLKVQNGWLRDPRVNETELPLAYLNGAYVKRSALATHDRIALAERAKKRRVALGMKVSECASAAGL
NMANFAQNERILRKFPDIDVEAKWEAALLVPAGWLRDQTIEALPLAFPASVLIPGSAYAADAVVTWHTVSKEIRAAAAWL
SRKAILRRTTEWGLLTPTEKSWAEIFSVRYGVQGEGQSTLESGGKRVGVTRERIRQIVKKMTERADGLKMPTPRLDELAV
EISRLAPATVAQLDIELKHKLGEELTIQSAQRFSVEIFGKKLAKFASSPWSQNQSNLDHVLKSGSQIEDDSLIRSARSVA
LKMIRGSGAANIHFVCGAVSDELDTEVSIKEVKTAIEMVDGFEWLAEPDGWFWFGNDIGDNRLQNVTKKVMAAADRKVDI
DEIYTAMGRSQRGYYKADDSKPFVIEAPSVILAKVLQRTPWLTRIQKNDFFANDETVLQGALSDVEAEIIKVIRANDGVA
VKYEIDAHVDRTLDVTTIATANALGKSPCFVQPAKGMYSICGCDIEPHALARAASFADSLFNRGTNATIDDKGYFTFEFE
LSEYHTKHKFIGMPGSLSRKLSAGEYALEDQAAPAFITKRESGLILLSKMMPRLSQLNAKVGESFRLRINPERMVASLHR
VEARSAQ

Sequences:

>Translated_887_residues
MSQNVGGRPRNDSGGVQASARLRSRRLDLGLTKIKVANDIGIPKGNYAYLERNFSEHLQNRHLEKLAILLSAPKEWIRTG
EGELPPASERAKDPDPPLIEVFTSGNECEVAVRISMRRTEMGITKPQMAKVLEIAVNSYSYLEKRCSPKAQKRHVSAIAC
VLHASQDWLLYGQGTPPTVPDIKLLAAELEAQSGPQSPELRIVLSQRAKKRRKALGLKVQKCAEQIGVSEAEFSQMEYCL
RAVVDQHVEDLWEGVLKVQNGWLRDPRVNETELPLAYLNGAYVKRSALATHDRIALAERAKKRRVALGMKVSECASAAGL
NMANFAQNERILRKFPDIDVEAKWEAALLVPAGWLRDQTIEALPLAFPASVLIPGSAYAADAVVTWHTVSKEIRAAAAWL
SRKAILRRTTEWGLLTPTEKSWAEIFSVRYGVQGEGQSTLESGGKRVGVTRERIRQIVKKMTERADGLKMPTPRLDELAV
EISRLAPATVAQLDIELKHKLGEELTIQSAQRFSVEIFGKKLAKFASSPWSQNQSNLDHVLKSGSQIEDDSLIRSARSVA
LKMIRGSGAANIHFVCGAVSDELDTEVSIKEVKTAIEMVDGFEWLAEPDGWFWFGNDIGDNRLQNVTKKVMAAADRKVDI
DEIYTAMGRSQRGYYKADDSKPFVIEAPSVILAKVLQRTPWLTRIQKNDFFANDETVLQGALSDVEAEIIKVIRANDGVA
VKYEIDAHVDRTLDVTTIATANALGKSPCFVQPAKGMYSICGCDIEPHALARAASFADSLFNRGTNATIDDKGYFTFEFE
LSEYHTKHKFIGMPGSLSRKLSAGEYALEDQAAPAFITKRESGLILLSKMMPRLSQLNAKVGESFRLRINPERMVASLHR
VEARSAQ
>Mature_886_residues
SQNVGGRPRNDSGGVQASARLRSRRLDLGLTKIKVANDIGIPKGNYAYLERNFSEHLQNRHLEKLAILLSAPKEWIRTGE
GELPPASERAKDPDPPLIEVFTSGNECEVAVRISMRRTEMGITKPQMAKVLEIAVNSYSYLEKRCSPKAQKRHVSAIACV
LHASQDWLLYGQGTPPTVPDIKLLAAELEAQSGPQSPELRIVLSQRAKKRRKALGLKVQKCAEQIGVSEAEFSQMEYCLR
AVVDQHVEDLWEGVLKVQNGWLRDPRVNETELPLAYLNGAYVKRSALATHDRIALAERAKKRRVALGMKVSECASAAGLN
MANFAQNERILRKFPDIDVEAKWEAALLVPAGWLRDQTIEALPLAFPASVLIPGSAYAADAVVTWHTVSKEIRAAAAWLS
RKAILRRTTEWGLLTPTEKSWAEIFSVRYGVQGEGQSTLESGGKRVGVTRERIRQIVKKMTERADGLKMPTPRLDELAVE
ISRLAPATVAQLDIELKHKLGEELTIQSAQRFSVEIFGKKLAKFASSPWSQNQSNLDHVLKSGSQIEDDSLIRSARSVAL
KMIRGSGAANIHFVCGAVSDELDTEVSIKEVKTAIEMVDGFEWLAEPDGWFWFGNDIGDNRLQNVTKKVMAAADRKVDID
EIYTAMGRSQRGYYKADDSKPFVIEAPSVILAKVLQRTPWLTRIQKNDFFANDETVLQGALSDVEAEIIKVIRANDGVAV
KYEIDAHVDRTLDVTTIATANALGKSPCFVQPAKGMYSICGCDIEPHALARAASFADSLFNRGTNATIDDKGYFTFEFEL
SEYHTKHKFIGMPGSLSRKLSAGEYALEDQAAPAFITKRESGLILLSKMMPRLSQLNAKVGESFRLRINPERMVASLHRV
EARSAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 98325; Mature: 98193

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNVGGRPRNDSGGVQASARLRSRRLDLGLTKIKVANDIGIPKGNYAYLERNFSEHLQN
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCHHHHHHH
RHLEKLAILLSAPKEWIRTGEGELPPASERAKDPDPPLIEVFTSGNECEVAVRISMRRTE
HHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEHHH
MGITKPQMAKVLEIAVNSYSYLEKRCSPKAQKRHVSAIACVLHASQDWLLYGQGTPPTVP
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
DIKLLAAELEAQSGPQSPELRIVLSQRAKKRRKALGLKVQKCAEQIGVSEAEFSQMEYCL
CHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHH
RAVVDQHVEDLWEGVLKVQNGWLRDPRVNETELPLAYLNGAYVKRSALATHDRIALAERA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH
KKRRVALGMKVSECASAAGLNMANFAQNERILRKFPDIDVEAKWEAALLVPAGWLRDQTI
HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCH
EALPLAFPASVLIPGSAYAADAVVTWHTVSKEIRAAAAWLSRKAILRRTTEWGLLTPTEK
HHHCCCCCCCEEECCCCHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
SWAEIFSVRYGVQGEGQSTLESGGKRVGVTRERIRQIVKKMTERADGLKMPTPRLDELAV
HHHHHHHHHCCCCCCCCHHHHCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
EISRLAPATVAQLDIELKHKLGEELTIQSAQRFSVEIFGKKLAKFASSPWSQNQSNLDHV
HHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LKSGSQIEDDSLIRSARSVALKMIRGSGAANIHFVCGAVSDELDTEVSIKEVKTAIEMVD
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
GFEWLAEPDGWFWFGNDIGDNRLQNVTKKVMAAADRKVDIDEIYTAMGRSQRGYYKADDS
HHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEECCCC
KPFVIEAPSVILAKVLQRTPWLTRIQKNDFFANDETVLQGALSDVEAEIIKVIRANDGVA
CCEEEECCHHHHHHHHHCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
VKYEIDAHVDRTLDVTTIATANALGKSPCFVQPAKGMYSICGCDIEPHALARAASFADSL
EEEEECCCCCCCEEEEEEEEHHHCCCCCCEECCCCCCHHHHCCCCCHHHHHHHHHHHHHH
FNRGTNATIDDKGYFTFEFELSEYHTKHKFIGMPGSLSRKLSAGEYALEDQAAPAFITKR
HHCCCCCEECCCCEEEEEEEHHHHCCHHHEECCCCHHHHHCCCCCHHHCCCCCCCEEEEC
ESGLILLSKMMPRLSQLNAKVGESFRLRINPERMVASLHRVEARSAQ
CCCEEEHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQNVGGRPRNDSGGVQASARLRSRRLDLGLTKIKVANDIGIPKGNYAYLERNFSEHLQN
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCHHHHHHH
RHLEKLAILLSAPKEWIRTGEGELPPASERAKDPDPPLIEVFTSGNECEVAVRISMRRTE
HHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEHHH
MGITKPQMAKVLEIAVNSYSYLEKRCSPKAQKRHVSAIACVLHASQDWLLYGQGTPPTVP
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
DIKLLAAELEAQSGPQSPELRIVLSQRAKKRRKALGLKVQKCAEQIGVSEAEFSQMEYCL
CHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHH
RAVVDQHVEDLWEGVLKVQNGWLRDPRVNETELPLAYLNGAYVKRSALATHDRIALAERA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH
KKRRVALGMKVSECASAAGLNMANFAQNERILRKFPDIDVEAKWEAALLVPAGWLRDQTI
HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCH
EALPLAFPASVLIPGSAYAADAVVTWHTVSKEIRAAAAWLSRKAILRRTTEWGLLTPTEK
HHHCCCCCCCEEECCCCHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
SWAEIFSVRYGVQGEGQSTLESGGKRVGVTRERIRQIVKKMTERADGLKMPTPRLDELAV
HHHHHHHHHCCCCCCCCHHHHCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
EISRLAPATVAQLDIELKHKLGEELTIQSAQRFSVEIFGKKLAKFASSPWSQNQSNLDHV
HHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LKSGSQIEDDSLIRSARSVALKMIRGSGAANIHFVCGAVSDELDTEVSIKEVKTAIEMVD
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
GFEWLAEPDGWFWFGNDIGDNRLQNVTKKVMAAADRKVDIDEIYTAMGRSQRGYYKADDS
HHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEECCCC
KPFVIEAPSVILAKVLQRTPWLTRIQKNDFFANDETVLQGALSDVEAEIIKVIRANDGVA
CCEEEECCHHHHHHHHHCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
VKYEIDAHVDRTLDVTTIATANALGKSPCFVQPAKGMYSICGCDIEPHALARAASFADSL
EEEEECCCCCCCEEEEEEEEHHHCCCCCCEECCCCCCHHHHCCCCCHHHHHHHHHHHHHH
FNRGTNATIDDKGYFTFEFELSEYHTKHKFIGMPGSLSRKLSAGEYALEDQAAPAFITKR
HHCCCCCEECCCCEEEEEEEHHHHCCHHHEECCCCHHHHHCCCCCHHHCCCCCCCEEEEC
ESGLILLSKMMPRLSQLNAKVGESFRLRINPERMVASLHRVEARSAQ
CCCEEEHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA