| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is isftu1
Identifier: 89257203
GI number: 89257203
Start: 301648
End: 302025
Strand: Direct
Name: isftu1
Synonym: FTL_0314
Alternate gene names: NA
Gene position: 301648-302025 (Clockwise)
Preceding gene: 89255742
Following gene: 89255745
Centisome position: 15.91
GC content: 33.07
Gene sequence:
>881_bases ATGCCATCATATAGCCAAGATTTTAGAGACATCGTAATTAATAAATATGAAGAAGGTATGACGGAGTTCGAGCTGAGTAA GTTTTTTAACATAGATAAGCGTACAGTTGTTTCATGGATAGAGCTTTATAAAAGAACCGGAGATTATAGTTCAAGGCAAG GAGTTGGTTGTGGCAGAGTCGCTAGCTTTACCGATAAAACATTGATTGAACAGTATTTGATAGATCATCCAGATGCAAGT ACATTAGATATAAAAGAAGCATTAGCCCCTGATATTCCAAGAAGTACATTTTATGATTGTCTTAATATACTTGGTTTTAG TTTTAAAAAAAGACTCCAAAATATAAGCAAAGAAAAGAACATGAAAGGTTGGAGTATATAGAAAAACTAAAAGAAATAGC TCAAAACTTGTTATTTTATATAGATGAGATGTGGTGTGACAATAAGCTTTCTATCCTAAGAGGATGGTCACTAATTGGTG AGCCTAGTTATGGCGAGGTTTTAGCATATCAAACACAAAGAAGAAGTATTGTTGCTGGATATAATTATGCAGATAAAAAG ATTATAGCTCCATTAGAGTACAGCGGATATACCAATACTGAAATTTTTAATCAATGGTTTGAGGAACACTTATGCCCATC ATTAAAACCTAAAACTACTATAGTAATGGATAATGCTAGTTTCCATAAATCCTCTAAGCTGATTGAAATAGCCAATAAAT TTGATGTACAAATATTATATCTACCTCCGTACTCTCCAGATTTAAATCCTATTGAAAAGGTTTGGGCTAACTTTAAAAAA ATATTTAGAAAAGTGAATAATAGTTTTGAAAAATTTTGTGATGCTATCTCTTATGTGTTTAACAAAATACTCTCGGATTA A
Upstream 100 bases:
>100_bases TCATAGCTTCTAAAGGTATCTGTGTAAACGATACTATAGTTAATCCGAAAGATATTTGTAGAAAAAGATATTTGTAGAAA TGTTATAATGTCTAATAAAA
Downstream 100 bases:
>100_bases CTATAAAAGTATTTGTATGAGAACTTTTTATGATTGCAATTATATTTAACCTAAACTGCTTCTTATACATTATATTTTCT TATAAATTATATCGAGGCTA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>296_residues MPSYSQDFRDIVINKYEEGMTEFELSKFFNIDKRTVVSWIELYKRTGDYSSRQGVGCGRVASFTDKTLIEQYLIDHPDAS TLDIKEALAPDIPRSTFYDCLNILGFSFKKRLQNISKEKNMKGWSILEYIEKLKEIAQNLLFYIDEMWCDNKLSILRGWS LIGEPSYGEVLAYQTQRRSIVAGYNYADKKIIAPLEYSGYTNTEIFNQWFEEHLCPSLKPKTTIVMDNASFHKSSKLIEI ANKFDVQILYLPPYSPDLNPIEKVWANFKKIFRKVNNSFEKFCDAISYVFNKILSD
Sequences:
>Translated_126_residues MPSYSQDFRDIVINKYEEGMTEFELSKFFNIDKRTVVSWIELYKRTGDYSSRQGVGCGRVASFTDKTLIEQYLIDHPDAS TLDIKEALAPDIPRSTFYDCLNILGFSFKKRLQNISKEKNMKGWSI >Mature_125_residues PSYSQDFRDIVINKYEEGMTEFELSKFFNIDKRTVVSWIELYKRTGDYSSRQGVGCGRVASFTDKTLIEQYLIDHPDAST LDIKEALAPDIPRSTFYDCLNILGFSFKKRLQNISKEKNMKGWSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14638; Mature: 14507
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSYSQDFRDIVINKYEEGMTEFELSKFFNIDKRTVVSWIELYKRTGDYSSRQGVGCGRV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH ASFTDKTLIEQYLIDHPDASTLDIKEALAPDIPRSTFYDCLNILGFSFKKRLQNISKEKN HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC MKGWSI CCCCCC >Mature Secondary Structure PSYSQDFRDIVINKYEEGMTEFELSKFFNIDKRTVVSWIELYKRTGDYSSRQGVGCGRV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH ASFTDKTLIEQYLIDHPDASTLDIKEALAPDIPRSTFYDCLNILGFSFKKRLQNISKEKN HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC MKGWSI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA