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The map label for this gene is hspC2 [H]

Identifier: 89257193

GI number: 89257193

Start: 1886041

End: 1886469

Strand: Direct

Name: hspC2 [H]

Synonym: FTL_1957

Alternate gene names: 89257193

Gene position: 1886041-1886469 (Clockwise)

Preceding gene: 89257191

Following gene: NA

Centisome position: 99.48

GC content: 27.51

Gene sequence:

>429_bases
ATGAGTAAAGAAATTAGATACAATCCATTTGAGCTAAAACATTCTATAAATGATCTTTTTGATAATTTTTTTAGCTTCCC
TAAAAGTTATCAAGAGGAGAAATATTTAGAAAATATACATCTAGATATAACAGAAGATGAAGCTGCTTATAATATTTCTG
TAGATTTAGCAGGTATAGAAGAAAAGGATATAGATATAGAGTTAGATAAAAATAAACTATCCATAAAAGCAAAACGCGAA
CACTTAGACAAAGATAAAAAGCATCATATCCAAGAGAGATATTATGGTGAATTTCAACGCAGCATAACGTTACCTGACAA
TATAGACAGTGACAAAATAGAAGCTAAATACAGTAATGGTGTACTAAGCTTGAACATCCCTAAAAAAGAAAAAGATAATA
CTACTAAAAAGATATCAATAAAATCTTAA

Upstream 100 bases:

>100_bases
TATCTTTAGATTCTAAAATATATTTCTTGAAATTTTAAAAACCGATCATATATTCAATTTTGAAGGGTATGAAAATGATA
AATCAGAAGGAGAATAAAAT

Downstream 100 bases:

>100_bases
TAACTTCTAATTATTTCAAATACTTCATTTAGTTTGATTTGATCTTTTTGTCCTGGTTCAGATTCTACACCAGAATTAAT
ATCATAAGCTGAACACTTCA

Product: heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSKEIRYNPFELKHSINDLFDNFFSFPKSYQEEKYLENIHLDITEDEAAYNISVDLAGIEEKDIDIELDKNKLSIKAKRE
HLDKDKKHHIQERYYGEFQRSITLPDNIDSDKIEAKYSNGVLSLNIPKKEKDNTTKKISIKS

Sequences:

>Translated_142_residues
MSKEIRYNPFELKHSINDLFDNFFSFPKSYQEEKYLENIHLDITEDEAAYNISVDLAGIEEKDIDIELDKNKLSIKAKRE
HLDKDKKHHIQERYYGEFQRSITLPDNIDSDKIEAKYSNGVLSLNIPKKEKDNTTKKISIKS
>Mature_141_residues
SKEIRYNPFELKHSINDLFDNFFSFPKSYQEEKYLENIHLDITEDEAAYNISVDLAGIEEKDIDIELDKNKLSIKAKREH
LDKDKKHHIQERYYGEFQRSITLPDNIDSDKIEAKYSNGVLSLNIPKKEKDNTTKKISIKS

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319546, Length=141, Percent_Identity=36.1702127659575, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: 686 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16740; Mature: 16609

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKEIRYNPFELKHSINDLFDNFFSFPKSYQEEKYLENIHLDITEDEAAYNISVDLAGIE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEECCCCEEEEEEEECCCC
EKDIDIELDKNKLSIKAKREHLDKDKKHHIQERYYGEFQRSITLPDNIDSDKIEAKYSNG
CCCCEEEECCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCC
VLSLNIPKKEKDNTTKKISIKS
EEEEECCCCCCCCCCEEEEECC
>Mature Secondary Structure 
SKEIRYNPFELKHSINDLFDNFFSFPKSYQEEKYLENIHLDITEDEAAYNISVDLAGIE
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEECCCCEEEEEEEECCCC
EKDIDIELDKNKLSIKAKREHLDKDKKHHIQERYYGEFQRSITLPDNIDSDKIEAKYSNG
CCCCEEEECCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCC
VLSLNIPKKEKDNTTKKISIKS
EEEEECCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA