| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89257149
Identifier: 89257149
GI number: 89257149
Start: 1832353
End: 1833138
Strand: Direct
Name: 89257149
Synonym: FTL_1901
Alternate gene names: NA
Gene position: 1832353-1833138 (Clockwise)
Preceding gene: 89257148
Following gene: 89257150
Centisome position: 96.64
GC content: 25.7
Gene sequence:
>786_bases ATGATCAATTTACTATTCATATACTTAGCGTATATCTTAGCTATTGTTTCGCTTTTATCTTTATGGATGATAAAGTTTAG AATATTTGGATATATTACAATTACAACATCTCTAGTATTTGCACTCCTATCAGGAGTATTAAACTTAACAGGTCTTTTAG TTATTTGCGTAATAGGTATTCTTATTTATTTGAGTTTTTATTTTAAAGATAAAAAAGGAGTTAGTTTATTTTTCTTTATT ATTTCTGCAGTGATTCTATTTCTTAACTACATGCATTTTTTTCCTGGCTTTAATAACATATGTATAATTAAAAATGCTCA AATTTCACAAGATGCTATAGCTTTTAGCTTATATTTAAACTATAGCTCTATTATACCAACATATTTTTTATTACTTTTTT CATCAGAAATTGGGATTTTAGAAAGTTCAAATAAACTACTACTAGTTATAAAATCAGGTATTTTTTATGGTTTATTAGCA TCTTTTATTTTAATTCTCATAAGCTATTTATTTGACTTCATTAGATTTGATTTTAAACTCACGCAATATACTTTAGTATT TATTTTTGTAAATCTGATATTTACATGTCTACCTGAGGAAATCTTTTGGAGAGGTTTTATTCAATCTAGGCTCGAAAAAT ATTTTAACTCAATTATAGCTATAATAATAACATCATTTGCATTTGCATTTATTCATATAGCATTTGCAGGAACTCGTTTT GCATTGCTAGCATTTATAGCTAGCCTTTTATATATGGTACCGCATACTCTAAGACCAGAAAGATAG
Upstream 100 bases:
>100_bases TTAATGCTATAGACAGATGGGGTAAAAAGCCATTAGATGATGCTATAATGAATAATAATATTTCTATAATTGAGCTGTTA GACAGAACTTAAATTAGCCT
Downstream 100 bases:
>100_bases AAGCGAGTATTATTTGTCATTATCTTGTCAATATTGGCCAGTTTATATTCTTTACTTACCCAATACTAGCTAAAGCTTAT CCATTGTAAAACTTCATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MINLLFIYLAYILAIVSLLSLWMIKFRIFGYITITTSLVFALLSGVLNLTGLLVICVIGILIYLSFYFKDKKGVSLFFFI ISAVILFLNYMHFFPGFNNICIIKNAQISQDAIAFSLYLNYSSIIPTYFLLLFSSEIGILESSNKLLLVIKSGIFYGLLA SFILILISYLFDFIRFDFKLTQYTLVFIFVNLIFTCLPEEIFWRGFIQSRLEKYFNSIIAIIITSFAFAFIHIAFAGTRF ALLAFIASLLYMVPHTLRPER
Sequences:
>Translated_261_residues MINLLFIYLAYILAIVSLLSLWMIKFRIFGYITITTSLVFALLSGVLNLTGLLVICVIGILIYLSFYFKDKKGVSLFFFI ISAVILFLNYMHFFPGFNNICIIKNAQISQDAIAFSLYLNYSSIIPTYFLLLFSSEIGILESSNKLLLVIKSGIFYGLLA SFILILISYLFDFIRFDFKLTQYTLVFIFVNLIFTCLPEEIFWRGFIQSRLEKYFNSIIAIIITSFAFAFIHIAFAGTRF ALLAFIASLLYMVPHTLRPER >Mature_261_residues MINLLFIYLAYILAIVSLLSLWMIKFRIFGYITITTSLVFALLSGVLNLTGLLVICVIGILIYLSFYFKDKKGVSLFFFI ISAVILFLNYMHFFPGFNNICIIKNAQISQDAIAFSLYLNYSSIIPTYFLLLFSSEIGILESSNKLLLVIKSGIFYGLLA SFILILISYLFDFIRFDFKLTQYTLVFIFVNLIFTCLPEEIFWRGFIQSRLEKYFNSIIAIIITSFAFAFIHIAFAGTRF ALLAFIASLLYMVPHTLRPER
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30048; Mature: 30048
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLLFIYLAYILAIVSLLSLWMIKFRIFGYITITTSLVFALLSGVLNLTGLLVICVIGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIYLSFYFKDKKGVSLFFFIISAVILFLNYMHFFPGFNNICIIKNAQISQDAIAFSLYLN HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHH YSSIIPTYFLLLFSSEIGILESSNKLLLVIKSGIFYGLLASFILILISYLFDFIRFDFKL HHHHHHHHHHHHHHCCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQYTLVFIFVNLIFTCLPEEIFWRGFIQSRLEKYFNSIIAIIITSFAFAFIHIAFAGTRF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLAFIASLLYMVPHTLRPER HHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MINLLFIYLAYILAIVSLLSLWMIKFRIFGYITITTSLVFALLSGVLNLTGLLVICVIGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIYLSFYFKDKKGVSLFFFIISAVILFLNYMHFFPGFNNICIIKNAQISQDAIAFSLYLN HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHH YSSIIPTYFLLLFSSEIGILESSNKLLLVIKSGIFYGLLASFILILISYLFDFIRFDFKL HHHHHHHHHHHHHHCCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQYTLVFIFVNLIFTCLPEEIFWRGFIQSRLEKYFNSIIAIIITSFAFAFIHIAFAGTRF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLAFIASLLYMVPHTLRPER HHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA