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The map label for this gene is blc [H]

Identifier: 89257145

GI number: 89257145

Start: 1827983

End: 1828501

Strand: Reverse

Name: blc [H]

Synonym: FTL_1897

Alternate gene names: 89257145

Gene position: 1828501-1827983 (Counterclockwise)

Preceding gene: 89257151

Following gene: 89257144

Centisome position: 96.44

GC content: 32.37

Gene sequence:

>519_bases
ATGAAAAAGTTAGTTTTAATAATCTTAACAACAGCATTTATATTGCTATCAGGTTGTGTAACCAAACCAGCAAATATAAA
TCCTGTCGAAAACTTTCAAGCGGATAAGTATCTTGGCAAATGGTATGAGATAGCAAGATTTGATAATAGTTTTGAAAAAG
GTATGACAAATGTTTATGCTGAATATAGTTTAAATCCAGATGGAACTATAAAGGTAATAAATAGTGGCATCACACCATCA
ACTGGTAAGAGAAGTTATGCTACGGGAATTGCTAAGTTTGTTGAAGATAAAAATATTGGCTACCTTAAAGTATCTTTCTT
TAGACCTTTCTATGGTGCGTATGTAGTATTTAAGCTTGATGATAATTATAAATATGCTTATGTGGCGGGTGCGAATAAGG
ATTATTTATGGCTACTTGCGCGAACAAAAACAGTACCACAAAATATCAAAGATGACTTTATCAACCGAGCTAAAGCTTTA
GGTTATGATACTGATAAATTAGTCTGGGTTAAGCAGTAA

Upstream 100 bases:

>100_bases
ATAACTTAATTCCATAATATTAAAACTTTTAGCTATTGTTATATATCACAGTTAGTTTACTATACTGTTTAGCATATAAG
AAATCAAAAGAGGTTTAATT

Downstream 100 bases:

>100_bases
AATATACTTTGGCTATCTAAGCAGTATACTTGCTTCAAAAAATCCAATCTTATTATGCGAAAATGCATATCTATTATGTA
ATTCTGTTTATTGTAAAAAT

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKKLVLIILTTAFILLSGCVTKPANINPVENFQADKYLGKWYEIARFDNSFEKGMTNVYAEYSLNPDGTIKVINSGITPS
TGKRSYATGIAKFVEDKNIGYLKVSFFRPFYGAYVVFKLDDNYKYAYVAGANKDYLWLLARTKTVPQNIKDDFINRAKAL
GYDTDKLVWVKQ

Sequences:

>Translated_172_residues
MKKLVLIILTTAFILLSGCVTKPANINPVENFQADKYLGKWYEIARFDNSFEKGMTNVYAEYSLNPDGTIKVINSGITPS
TGKRSYATGIAKFVEDKNIGYLKVSFFRPFYGAYVVFKLDDNYKYAYVAGANKDYLWLLARTKTVPQNIKDDFINRAKAL
GYDTDKLVWVKQ
>Mature_172_residues
MKKLVLIILTTAFILLSGCVTKPANINPVENFQADKYLGKWYEIARFDNSFEKGMTNVYAEYSLNPDGTIKVINSGITPS
TGKRSYATGIAKFVEDKNIGYLKVSFFRPFYGAYVVFKLDDNYKYAYVAGANKDYLWLLARTKTVPQNIKDDFINRAKAL
GYDTDKLVWVKQ

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=164, Percent_Identity=29.8780487804878, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1790592, Length=174, Percent_Identity=44.2528735632184, Blast_Score=154, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 19575; Mature: 19575

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVLIILTTAFILLSGCVTKPANINPVENFQADKYLGKWYEIARFDNSFEKGMTNVYA
CCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEE
EYSLNPDGTIKVINSGITPSTGKRSYATGIAKFVEDKNIGYLKVSFFRPFYGAYVVFKLD
EEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEC
DNYKYAYVAGANKDYLWLLARTKTVPQNIKDDFINRAKALGYDTDKLVWVKQ
CCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MKKLVLIILTTAFILLSGCVTKPANINPVENFQADKYLGKWYEIARFDNSFEKGMTNVYA
CCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEE
EYSLNPDGTIKVINSGITPSTGKRSYATGIAKFVEDKNIGYLKVSFFRPFYGAYVVFKLD
EEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEC
DNYKYAYVAGANKDYLWLLARTKTVPQNIKDDFINRAKALGYDTDKLVWVKQ
CCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]