| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is isftu1
Identifier: 89257137
GI number: 89257137
Start: 1818626
End: 1819129
Strand: Direct
Name: isftu1
Synonym: FTL_1886
Alternate gene names: NA
Gene position: 1818626-1819129 (Clockwise)
Preceding gene: 89257124
Following gene: 89257141
Centisome position: 95.92
GC content: 31.15
Gene sequence:
>830_bases ATGCCATCATATAGCCAAGATTTTAGAGACATCGTAATTAATAAATATGAAGAAGGTATGACGGAGTTCGAGCTGAGTAA GTTTTTTAACATAGATAAGCGTACAGTTGTTTCATGGATAGAGCTTTATAAAAGAACCGGAGATTATAGTTCAAGGCAAG GAGTTGGTTGTGGCAGAGTCGCTAGCTTTACCGATAAAACATTGATTGAACAGTATTTGATAGATCATCCAGATGCAAGT ACATTAGATATAAAAGAAGCATTAGCCCCTGATATTCCAAGAAGTACATTTTATGATTGTCTTAATATACTTGGTTTTAG TTTTAAAAAAAGACTCCAAAATATAAGCAAAGAAAAGAACATGAAAGGTTGGAGTATATAGAAAAACTAAAAGAAATAGC TCAAAACTTGTTATTTTATATAGATGAGATGGGGTGTGACAATAAGCTTTCTATCCTAAGAGGATGGTCACTAATTGGTG AGCCTAGTTATGGCGAGGTTTTAGCATATCAAACACAAAGAAGAAGTATTGTTGCTGGATATAATTATGCAGATAAAAAG ATTATAGCTCCATTAGAGTACAGCGGATATACCAATACTGAAATTTTTAATCAATGGTTTGAGGAACACTTATGCCCATC ATTAAAACCTAAAACTACTATAGTAATGGATAATGCTAGTTTCCATAAATCCTCTAAGCTGATTGAAATAGCCAATAAAT TTGATGTACAAATATTATATCTACCTCCGTACTCTCCAGATTTAAATCCTATTGAAAAGGTTTGGGCTAACTTTAAAAAA ATATTTAGGTTCTGTGCACAAAAAACTTAA
Upstream 100 bases:
>100_bases TGCTTATACAAAAACTTGATAATAGTTGTTTTCGTATAGTTAATCCGAAAGATATTTGTAGAAAAAGATATTTGTAGAAA TGTTATAATGTCTAATAAAA
Downstream 100 bases:
>100_bases ATTATATTGAAAATAGCTAAACTGCTGTTATTTAAGATTTGAAAAGCAATAAATATCAATGGTTTAGCAAATGAATTATC ATATAAAAGAAGTATTCTGG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>276_residues MPSYSQDFRDIVINKYEEGMTEFELSKFFNIDKRTVVSWIELYKRTGDYSSRQGVGCGRVASFTDKTLIEQYLIDHPDAS TLDIKEALAPDIPRSTFYDCLNILGFSFKKKTPKYKQRKEHERLEYIEKLKEIAQNLLFYIDEMGCDNKLSILRGWSLIG EPSYGEVLAYQTQRRSIVAGYNYADKKIIAPLEYSGYTNTEIFNQWFEEHLCPSLKPKTTIVMDNASFHKSSKLIEIANK FDVQILYLPPYSPDLNPIEKVWANFKKIFRFCAQKT
Sequences:
>Translated_168_residues LSFLCTEPKYFFKVSPNLFNRI*IWRVRR*I*YLYIKFIGYFNQLRGFMETSIIHYYSSFRF**WA*VFLKPLIKNFSIG ISAVL*WSYNLFICIIISSNNTSSLCLIC*NLAITRLTN**PSS*DRKLIVTPHLIYIK*QVLSYFF*FFYILQPFMFFS LLIFWSLF >Mature_168_residues LSFLCTEPKYFFKVSPNLFNRI*IWRVRR*I*YLYIKFIGYFNQLRGFMETSIIHYYSSFRF**WA*VFLKPLIKNFSIG ISAVL*WSYNLFICIIISSNNTSSLCLIC*NLAITRLTN**PSS*DRKLIVTPHLIYIK*QVLSYFF*FFYILQPFMFFS LLIFWSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18420; Mature: 18420
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LSFLCTEPKYFFKVSPNLFNRIIWRVRRIYLYIKFIGYFNQLRGFMETSIIHYYSSFRFW CCCEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVFLKPLIKNFSIGISAVLWSYNLFICIIISSNNTSSLCLICNLAITRLTNPSSDRKLIV HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEE TPHLIYIKQVLSYFFFFYILQPFMFFSLLIFWSLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA