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The map label for this gene is lysA [H]

Identifier: 89257094

GI number: 89257094

Start: 1768705

End: 1769958

Strand: Direct

Name: lysA [H]

Synonym: FTL_1834

Alternate gene names: 89257094

Gene position: 1768705-1769958 (Clockwise)

Preceding gene: 89257093

Following gene: 89257095

Centisome position: 93.29

GC content: 32.7

Gene sequence:

>1254_bases
ATGTCTAAACTAAGCGATTCAAAGAGTGTTTTTAGTAAACTTTCAAACAAACAAATTGAAACAATTATTCAAAGATATGC
TTCGCCATGCTTTATCATCGATGAAAATGCGCTGCTAGAACGAGCTAGACTTTTTCAACAAGCTATTTTAAATCAATATC
AAAATAGTATTGCCGCATACTCAGTAAAAACTCAATCTCTAAACACTATTATTCAAAAATTTTATGAAGTAGGATTTATC
CCAGAGGTTGTCTCGAGTGATGAGTTTGAGCAAATACAAAAACTACAACTATGTGATAAAAGTATAATCTTTAATGGTCC
ATATAAAAATGATGCAAGCTTAATCAAAGCATTACAATTAAATGCTATGATAAACTGTGATCACTTTGATGAAATATTGC
GCATTGCAAAGATCGCAAAAAAGCTAAATATAACTGCAAAAATTGGTTTAAGAGTAGCAGATAATAAAACTCCTCAAAAT
TGGTCTAGATTTGGATTTGCCTTAACAGACCAACAAAGTAATAGTGATATATTTACCACCATAGACAAAATACAACAAAT
AGCAAATATTCAATTAGCTGGGCTACATTGTCATATTGGAACAAATATTAGAGATATCTCGAGATTTACCGCAATGGCAA
AAAACATTGCCGAATTGGCCGAGACGATTCTAACAAAGTATAAGCTTACTCTAGAATGGATAGACTTAGGTGGCGGTTTA
GCAGGAATAAGCCCTACTCTAAGCGATAAAAGATTACAACCATACAACCCTTTTGATTTAGAACTATATGCCGCGACAAT
AATAGTCCCCCTAAAAGAGTATTTAAACAAAACCAATGATAAAACTAAATTAATTTTTGAGCTAGGACGTAGTTTGGTCG
ATTATTCAGTAGCACTATTAACAACTATAGTTGGTACTAGAGAGCAAAATGAAGATTTCCAAAGCTTAATAACAGATGCT
GGAATACATACCATACCAACAATATCTACCTATAGACACCCAATCTACCACCTAAAAACTGATAGCTACCACAAGAAAAC
CTTACTATTGGGTCCTAGTTGTATGCAACATGATTTTTTGCATGATGATATATTTTTACCGAAGCTTGAATATGGAGATA
AATTACTGATAGATGGAGTTGGGGCTTATAACATATCAAGAAATAACGAGTTCATCCATCTAAAGCCAAGTGTAATTCTA
ATCGACAAAAATCATCAATACCAAGTTCTCAGAGTTAGACAAACACATCAATAA

Upstream 100 bases:

>100_bases
GTTACTGCTATTATCTATATGTTTTTAGTAGTTATCTACATATGTCTACTTTATCTATTTGACCTTAAATCATCTAATTT
TAAAAATAAGGAATTAATAA

Downstream 100 bases:

>100_bases
TAATAGGTAATTAAAATGCAGATTGATAATAAAAATTTAAAATATATCCCTTTACTTGTTCTTTTAACATGGTTTTTAGG
TAATATGGGCGTATATTTCT

Product: diaminopimelate decarboxylase

Products: NA

Alternate protein names: DAP decarboxylase [H]

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MSKLSDSKSVFSKLSNKQIETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFI
PEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAKIGLRVADNKTPQN
WSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGL
AGISPTLSDKRLQPYNPFDLELYAATIIVPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDA
GIHTIPTISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISRNNEFIHLKPSVIL
IDKNHQYQVLRVRQTHQ

Sequences:

>Translated_417_residues
MSKLSDSKSVFSKLSNKQIETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFI
PEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAKIGLRVADNKTPQN
WSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGL
AGISPTLSDKRLQPYNPFDLELYAATIIVPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDA
GIHTIPTISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISRNNEFIHLKPSVIL
IDKNHQYQVLRVRQTHQ
>Mature_416_residues
SKLSDSKSVFSKLSNKQIETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIP
EVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAKIGLRVADNKTPQNW
SRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLA
GISPTLSDKRLQPYNPFDLELYAATIIVPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAG
IHTIPTISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISRNNEFIHLKPSVILI
DKNHQYQVLRVRQTHQ

Specific function: Lysine biosynthesis; last step. [C]

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-II family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009006
- InterPro:   IPR002986
- InterPro:   IPR022643
- InterPro:   IPR022644
- InterPro:   IPR000183 [H]

Pfam domain/function: PF02784 Orn_Arg_deC_N; PF00278 Orn_DAP_Arg_deC [H]

EC number: =4.1.1.20 [H]

Molecular weight: Translated: 47426; Mature: 47295

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLSDSKSVFSKLSNKQIETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAY
CCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHEE
SVKTQSLNTIIQKFYEVGFIPEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQL
EEHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH
NAMINCDHFDEILRIAKIAKKLNITAKIGLRVADNKTPQNWSRFGFALTDQQSNSDIFTT
HHEECCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHCEEEECCCCCCHHHHH
IDKIQQIANIQLAGLHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGL
HHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
AGISPTLSDKRLQPYNPFDLELYAATIIVPLKEYLNKTNDKTKLIFELGRSLVDYSVALL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
TTIVGTREQNEDFQSLITDAGIHTIPTISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFL
HHHHCCCCCCHHHHHHHHHCCCCCCCCCHHCCCCEEEECCCCCCCEEEEECCHHHHHCCC
HDDIFLPKLEYGDKLLIDGVGAYNISRNNEFIHLKPSVILIDKNHQYQVLRVRQTHQ
CCCEECCCCCCCCEEEEECCCEEEECCCCCEEEECCEEEEEECCCCEEEEEEECCCC
>Mature Secondary Structure 
SKLSDSKSVFSKLSNKQIETIIQRYASPCFIIDENALLERARLFQQAILNQYQNSIAAY
CCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHEE
SVKTQSLNTIIQKFYEVGFIPEVVSSDEFEQIQKLQLCDKSIIFNGPYKNDASLIKALQL
EEHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH
NAMINCDHFDEILRIAKIAKKLNITAKIGLRVADNKTPQNWSRFGFALTDQQSNSDIFTT
HHEECCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHCEEEECCCCCCHHHHH
IDKIQQIANIQLAGLHCHIGTNIRDISRFTAMAKNIAELAETILTKYKLTLEWIDLGGGL
HHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
AGISPTLSDKRLQPYNPFDLELYAATIIVPLKEYLNKTNDKTKLIFELGRSLVDYSVALL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
TTIVGTREQNEDFQSLITDAGIHTIPTISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFL
HHHHCCCCCCHHHHHHHHHCCCCCCCCCHHCCCCEEEECCCCCCCEEEEECCHHHHHCCC
HDDIFLPKLEYGDKLLIDGVGAYNISRNNEFIHLKPSVILIDKNHQYQVLRVRQTHQ
CCCEECCCCCCCCEEEEECCCEEEECCCCCEEEECCEEEEEECCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA