| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256999
Identifier: 89256999
GI number: 89256999
Start: 1661567
End: 1662814
Strand: Direct
Name: 89256999
Synonym: FTL_1730
Alternate gene names: NA
Gene position: 1661567-1662814 (Clockwise)
Preceding gene: 89256997
Following gene: 89257000
Centisome position: 87.64
GC content: 27.88
Gene sequence:
>1248_bases ATGTCTTTACTATTTGTATCTGCAATTATTTGGATGGTTATTCTTACTAAGAAAAATTTCTCTATAATCGAAACTTTAGT TTTTTGTAGTTTTTATCTTATTTCTCCTATTTATATTTTTCAGTTTAATTTTGTTAATCAAGCGATTGGTATCGGTATAG GATTTGTATTGACTAGCTTAGCTATATATCATTTCTCACTTATACTTAATCATGACTGTGAGAAATTTAAAAATTACGTA GCATCTATAGTCTATTTGTTTCTATGCATTGGAATATATCAGTCATTTATAATACTTTTTGCTGAAGGAGTTATTTTTTT ACTAATTCTAGAGCAACTTAAAAATATAAAAACCAACCTAAAAGTTATTATAAGTATTTTAACAAAAATTTTATTTGTGT CTTTAGCTGCTCTTATCGGCTATCTCTTGATATCTAAAGTAATCTATATTTTTATCGGAGAGTCTCATTATTTAGCTAAT GTTTACGAAGGCTGGCATAGTAATAGCTTTTCGGAAGTTATAAAACACCTATTACTCTACTTTGCTAATATACTAATATC TCCTCTTAGTTTTACATATGTATTAGCATCGCTATTACTTATATGTTTTGTTAGAAAATTTTCTTTGATTATAATGCTAG CGTTATTAGGATGTTTAGCATTACCATTTGCTTTCGCGGTCTTTTTGGGTGCGCCAATACCTCTAAGGATACTATTTCCA ATACCTCTGAGTATTGCTATAGTGATGTTATTAATCTTTAGAGTAACTTCTAACAAGAAGCTAATTATCGCTATAGCTTG TTTATGTTTATTTGTGAATTTTAAACAAATCTGTCAACTAACATATAGTCAAAATATGGTGCAAAAATATAATGAGTATA ATTTAGAACATTTATACTCTATTTTACATGATAAGTTTGGCAATAAACTCTATAACACTCCAGTAGTCTTTATTGCTAGT CCCAAAGCTGATAATAGTTTTTATATAAGACATATTTATTCTGAGCCTTTTTATTTTAACAGTGATGAAGATTTTCTAAG CAATGTTTTCCCAGATAAGATGTGGCAAACAAGTAGCATAAATCATCGCGTATATTATTTTATGCAATGGCTCGGCTTAT TCTATAAATTACCAACTGAACAACAAATTGAGCTTGGAAAACAAATTAGTCCTTCACTAGCTATCTTTCCAGAAAAAGGT TCAATAACGAAAAAAAATAATATTATTTTTGTAAAACTTAGTGAATAG
Upstream 100 bases:
>100_bases ATTACATACCTAGTACTTTCTTTTAGACAGACCAACCTTAGCAATTATAACTTATGTTTTAGGACAAGTTGCTATTCCAT ATTTTACTTTACTGATAAGT
Downstream 100 bases:
>100_bases GTTATTCAAACATAACTTGTAGTATGAACTTAACAAATCTTGATTAAAACTTGAAATAATACTATTTATTTAATAAGGTT AATAAATAATACTTTATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSLLFVSAIIWMVILTKKNFSIIETLVFCSFYLISPIYIFQFNFVNQAIGIGIGFVLTSLAIYHFSLILNHDCEKFKNYV ASIVYLFLCIGIYQSFIILFAEGVIFLLILEQLKNIKTNLKVIISILTKILFVSLAALIGYLLISKVIYIFIGESHYLAN VYEGWHSNSFSEVIKHLLLYFANILISPLSFTYVLASLLLICFVRKFSLIIMLALLGCLALPFAFAVFLGAPIPLRILFP IPLSIAIVMLLIFRVTSNKKLIIAIACLCLFVNFKQICQLTYSQNMVQKYNEYNLEHLYSILHDKFGNKLYNTPVVFIAS PKADNSFYIRHIYSEPFYFNSDEDFLSNVFPDKMWQTSSINHRVYYFMQWLGLFYKLPTEQQIELGKQISPSLAIFPEKG SITKKNNIIFVKLSE
Sequences:
>Translated_415_residues MSLLFVSAIIWMVILTKKNFSIIETLVFCSFYLISPIYIFQFNFVNQAIGIGIGFVLTSLAIYHFSLILNHDCEKFKNYV ASIVYLFLCIGIYQSFIILFAEGVIFLLILEQLKNIKTNLKVIISILTKILFVSLAALIGYLLISKVIYIFIGESHYLAN VYEGWHSNSFSEVIKHLLLYFANILISPLSFTYVLASLLLICFVRKFSLIIMLALLGCLALPFAFAVFLGAPIPLRILFP IPLSIAIVMLLIFRVTSNKKLIIAIACLCLFVNFKQICQLTYSQNMVQKYNEYNLEHLYSILHDKFGNKLYNTPVVFIAS PKADNSFYIRHIYSEPFYFNSDEDFLSNVFPDKMWQTSSINHRVYYFMQWLGLFYKLPTEQQIELGKQISPSLAIFPEKG SITKKNNIIFVKLSE >Mature_414_residues SLLFVSAIIWMVILTKKNFSIIETLVFCSFYLISPIYIFQFNFVNQAIGIGIGFVLTSLAIYHFSLILNHDCEKFKNYVA SIVYLFLCIGIYQSFIILFAEGVIFLLILEQLKNIKTNLKVIISILTKILFVSLAALIGYLLISKVIYIFIGESHYLANV YEGWHSNSFSEVIKHLLLYFANILISPLSFTYVLASLLLICFVRKFSLIIMLALLGCLALPFAFAVFLGAPIPLRILFPI PLSIAIVMLLIFRVTSNKKLIIAIACLCLFVNFKQICQLTYSQNMVQKYNEYNLEHLYSILHDKFGNKLYNTPVVFIASP KADNSFYIRHIYSEPFYFNSDEDFLSNVFPDKMWQTSSINHRVYYFMQWLGLFYKLPTEQQIELGKQISPSLAIFPEKGS ITKKNNIIFVKLSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47767; Mature: 47636
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLFVSAIIWMVILTKKNFSIIETLVFCSFYLISPIYIFQFNFVNQAIGIGIGFVLTSL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIYHFSLILNHDCEKFKNYVASIVYLFLCIGIYQSFIILFAEGVIFLLILEQLKNIKTNL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVIISILTKILFVSLAALIGYLLISKVIYIFIGESHYLANVYEGWHSNSFSEVIKHLLLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH FANILISPLSFTYVLASLLLICFVRKFSLIIMLALLGCLALPFAFAVFLGAPIPLRILFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC IPLSIAIVMLLIFRVTSNKKLIIAIACLCLFVNFKQICQLTYSQNMVQKYNEYNLEHLYS CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ILHDKFGNKLYNTPVVFIASPKADNSFYIRHIYSEPFYFNSDEDFLSNVFPDKMWQTSSI HHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEECCCHHHHHHCCCHHHCCCCCC NHRVYYFMQWLGLFYKLPTEQQIELGKQISPSLAIFPEKGSITKKNNIIFVKLSE CHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCCEECCCEEEEEECC >Mature Secondary Structure SLLFVSAIIWMVILTKKNFSIIETLVFCSFYLISPIYIFQFNFVNQAIGIGIGFVLTSL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIYHFSLILNHDCEKFKNYVASIVYLFLCIGIYQSFIILFAEGVIFLLILEQLKNIKTNL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVIISILTKILFVSLAALIGYLLISKVIYIFIGESHYLANVYEGWHSNSFSEVIKHLLLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH FANILISPLSFTYVLASLLLICFVRKFSLIIMLALLGCLALPFAFAVFLGAPIPLRILFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC IPLSIAIVMLLIFRVTSNKKLIIAIACLCLFVNFKQICQLTYSQNMVQKYNEYNLEHLYS CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ILHDKFGNKLYNTPVVFIASPKADNSFYIRHIYSEPFYFNSDEDFLSNVFPDKMWQTSSI HHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEECCCHHHHHHCCCHHHCCCCCC NHRVYYFMQWLGLFYKLPTEQQIELGKQISPSLAIFPEKGSITKKNNIIFVKLSE CHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCCEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA