| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256948
Identifier: 89256948
GI number: 89256948
Start: 1612224
End: 1613237
Strand: Reverse
Name: 89256948
Synonym: FTL_1678
Alternate gene names: NA
Gene position: 1613237-1612224 (Counterclockwise)
Preceding gene: 89256949
Following gene: 89256941
Centisome position: 85.09
GC content: 27.12
Gene sequence:
>1014_bases ATGTTGTTAAAAAATAATTATTTAGTAAGTATTATATTAGTAGTACTAATTATGATAGTTACAAAATCATTTGCTTGTGC TGCTACAGATTACAATAAAGTCGCTTTAATTAATGTATCAACACAATATTATCCGAATGACATAAAACAAGCAGAGAAAG CGCTTAAAGACACCGGATATAATACTACTTATAAATATTTAGACATATATCCTTCTGATTTTGGATATTCTAATCCAGAT TCAATAAGAGCTAAAATATTATTAGATGCTCTTTTAGATAAAAATATAGATATTATTTGGTTCTTAAAAGGAGGAGGTGG AGCATTTAATTTATTACCTTATCTATATGATCATATAAATGAGCTTAAAAAAGCTAAACCTAAAATATTAGTTGGATTTA GTGATGTTACAGCTATACATTTTTTTGTTAATAATGTACTAGGATGGAAATCATTACATGGTGTAGTAGCTGCTTATAAT AAGAATGCTTATAGCTCACAAAAAATAGAAAAAATTAGAATCAATGACTTAGAAAGAATTCCTAATATTACAGAAATTAT AAACAATGGCATATCATATGATAAATTAATGCCAATGAATAAAATGGCTTATAATGGTACTGATGGTAGTATTGTTGGAG GTAATATGACGCTGATATATTCTTATTTCTCAACCGTTTACCAACAAGATATCTCAACAAAAATTCTATTTCTTGAAGAT ACTGGCATTTCATTTAGACAGTTAGATAGGTCACTACATCAGTTACTTTATCTGCCAGAAAATAAAAAACCTGAAGCTAT TATATTTGGCCAGTTTTATCCATTAGACCCTACCGATGATCAAAGGCTCATATATAAAACTGTAATTAAAAAGTTTGCCA AAACTTTTAATAGACCTGTATATTATTTTCCTTTTATAGGTCATGGACAATACAATAAACCTTTATTGCTTGGAGTTACA TCCAATATTAAATGTTCTAAAGAAACTATATTTTGCACTTTAAAACAAAAATAA
Upstream 100 bases:
>100_bases CTTGTGTGTATTAATATTATAAATTGCTAGATATTATTAATATCTAATGTCCATATTAATGTTATAATTAAGATAAACAT TATTAATAAATAAATTCTTT
Downstream 100 bases:
>100_bases CGATTTAATCAAAGCGGAAATTTAGCCTCAACTATTTAATTCGACCCAAGAATGTCATGATGAGTACTAAATCAAGTCCA GTACATATTTATTTTAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MLLKNNYLVSIILVVLIMIVTKSFACAATDYNKVALINVSTQYYPNDIKQAEKALKDTGYNTTYKYLDIYPSDFGYSNPD SIRAKILLDALLDKNIDIIWFLKGGGGAFNLLPYLYDHINELKKAKPKILVGFSDVTAIHFFVNNVLGWKSLHGVVAAYN KNAYSSQKIEKIRINDLERIPNITEIINNGISYDKLMPMNKMAYNGTDGSIVGGNMTLIYSYFSTVYQQDISTKILFLED TGISFRQLDRSLHQLLYLPENKKPEAIIFGQFYPLDPTDDQRLIYKTVIKKFAKTFNRPVYYFPFIGHGQYNKPLLLGVT SNIKCSKETIFCTLKQK
Sequences:
>Translated_337_residues MLLKNNYLVSIILVVLIMIVTKSFACAATDYNKVALINVSTQYYPNDIKQAEKALKDTGYNTTYKYLDIYPSDFGYSNPD SIRAKILLDALLDKNIDIIWFLKGGGGAFNLLPYLYDHINELKKAKPKILVGFSDVTAIHFFVNNVLGWKSLHGVVAAYN KNAYSSQKIEKIRINDLERIPNITEIINNGISYDKLMPMNKMAYNGTDGSIVGGNMTLIYSYFSTVYQQDISTKILFLED TGISFRQLDRSLHQLLYLPENKKPEAIIFGQFYPLDPTDDQRLIYKTVIKKFAKTFNRPVYYFPFIGHGQYNKPLLLGVT SNIKCSKETIFCTLKQK >Mature_337_residues MLLKNNYLVSIILVVLIMIVTKSFACAATDYNKVALINVSTQYYPNDIKQAEKALKDTGYNTTYKYLDIYPSDFGYSNPD SIRAKILLDALLDKNIDIIWFLKGGGGAFNLLPYLYDHINELKKAKPKILVGFSDVTAIHFFVNNVLGWKSLHGVVAAYN KNAYSSQKIEKIRINDLERIPNITEIINNGISYDKLMPMNKMAYNGTDGSIVGGNMTLIYSYFSTVYQQDISTKILFLED TGISFRQLDRSLHQLLYLPENKKPEAIIFGQFYPLDPTDDQRLIYKTVIKKFAKTFNRPVYYFPFIGHGQYNKPLLLGVT SNIKCSKETIFCTLKQK
Specific function: Unknown
COG id: COG1619
COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S66 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003507 [H]
Pfam domain/function: PF02016 Peptidase_S66 [H]
EC number: NA
Molecular weight: Translated: 38459; Mature: 38459
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLKNNYLVSIILVVLIMIVTKSFACAATDYNKVALINVSTQYYPNDIKQAEKALKDTGY CEECCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHCCC NTTYKYLDIYPSDFGYSNPDSIRAKILLDALLDKNIDIIWFLKGGGGAFNLLPYLYDHIN CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH ELKKAKPKILVGFSDVTAIHFFVNNVLGWKSLHGVVAAYNKNAYSSQKIEKIRINDLERI HHHHCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCHHHHEEECCHHHHC PNITEIINNGISYDKLMPMNKMAYNGTDGSIVGGNMTLIYSYFSTVYQQDISTKILFLED CCHHHHHHCCCCHHHCCCCHHHEECCCCCCEECCCHHHHHHHHHHHHHHCCCEEEEEEEC TGISFRQLDRSLHQLLYLPENKKPEAIIFGQFYPLDPTDDQRLIYKTVIKKFAKTFNRPV CCCHHHHHHHHHHHHEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCE YYFPFIGHGQYNKPLLLGVTSNIKCSKETIFCTLKQK EEEEEECCCCCCCCEEEEECCCCEECCEEEEEEEECC >Mature Secondary Structure MLLKNNYLVSIILVVLIMIVTKSFACAATDYNKVALINVSTQYYPNDIKQAEKALKDTGY CEECCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHCCC NTTYKYLDIYPSDFGYSNPDSIRAKILLDALLDKNIDIIWFLKGGGGAFNLLPYLYDHIN CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH ELKKAKPKILVGFSDVTAIHFFVNNVLGWKSLHGVVAAYNKNAYSSQKIEKIRINDLERI HHHHCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCHHHHEEECCHHHHC PNITEIINNGISYDKLMPMNKMAYNGTDGSIVGGNMTLIYSYFSTVYQQDISTKILFLED CCHHHHHHCCCCHHHCCCCHHHEECCCCCCEECCCHHHHHHHHHHHHHHCCCEEEEEEEC TGISFRQLDRSLHQLLYLPENKKPEAIIFGQFYPLDPTDDQRLIYKTVIKKFAKTFNRPV CCCHHHHHHHHHHHHEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCE YYFPFIGHGQYNKPLLLGVTSNIKCSKETIFCTLKQK EEEEEECCCCCCCCEEEEECCCCEECCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]