| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256923
Identifier: 89256923
GI number: 89256923
Start: 1577182
End: 1577793
Strand: Reverse
Name: 89256923
Synonym: FTL_1646
Alternate gene names: NA
Gene position: 1577793-1577182 (Counterclockwise)
Preceding gene: 89256925
Following gene: 89256922
Centisome position: 83.22
GC content: 33.99
Gene sequence:
>612_bases ATGAAGAAAGTAATTACTTTTTCAGTGTTATTTCTTTGCTCTATTTTTGGTTATAGTGATAATAACCTAAATCAACAAAC GGGGATGTATTACATTACTGCTAATAACTTCTTTTATCGTCCAAGTACCGAGAGAGGTAATGAAGTTGTTGATAGGCAAA ATGCCTCAGAATTCTCAGATAGAATATCAGGTAGTGCAATTAATATTACTGATTCGCTTGTTTTTGATGCTTATACAAGC TCAACTAGTCTGATAGCTCAGGGATCAATGGGTGATCTCAAAGATACAAAGTTCTATACTCAAGAAACAAAACTAGTTAA AAAGCTATGGAATGATAAGCTTGAGATTTACGGCGGAACAGTTTTAGGAGCAAATCCATATCAGTTAAATAATATGAATT CAGCTTATGATCCTGGTTCTAGGATAGCAGCTTTTGCAAGTGGTCGCACAGGTGCTAAATATAATGTTTCACGTAATTTT GGTTTATTAATTGAGGGGCAATACAATCTTACAGGTGAAATGGCTGATAATACTGATATGTTTACTGGTTTTAATGGCGC ACAATATCGTAACTCAACTTTAGTAAAAACTGGTTTTGAGTGGAATTTCTAG
Upstream 100 bases:
>100_bases TTTATCTTTTTAGAAAAAGATTGTCTAATTAACTTTTTTTAATATAATCAAAGCAATTTAGATTATGATAAAATTAGCTA TTTAACGAGGAGAAAAAAAT
Downstream 100 bases:
>100_bases TATAGATAAATAAGATTTTACTAAGGTTTATAAACTGATTGATTATTAGGAGATCTATAGCTAATTAATTTGTTAGTATC TAAAAAATTATTTGTATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MKKVITFSVLFLCSIFGYSDNNLNQQTGMYYITANNFFYRPSTERGNEVVDRQNASEFSDRISGSAINITDSLVFDAYTS STSLIAQGSMGDLKDTKFYTQETKLVKKLWNDKLEIYGGTVLGANPYQLNNMNSAYDPGSRIAAFASGRTGAKYNVSRNF GLLIEGQYNLTGEMADNTDMFTGFNGAQYRNSTLVKTGFEWNF
Sequences:
>Translated_203_residues MKKVITFSVLFLCSIFGYSDNNLNQQTGMYYITANNFFYRPSTERGNEVVDRQNASEFSDRISGSAINITDSLVFDAYTS STSLIAQGSMGDLKDTKFYTQETKLVKKLWNDKLEIYGGTVLGANPYQLNNMNSAYDPGSRIAAFASGRTGAKYNVSRNF GLLIEGQYNLTGEMADNTDMFTGFNGAQYRNSTLVKTGFEWNF >Mature_203_residues MKKVITFSVLFLCSIFGYSDNNLNQQTGMYYITANNFFYRPSTERGNEVVDRQNASEFSDRISGSAINITDSLVFDAYTS STSLIAQGSMGDLKDTKFYTQETKLVKKLWNDKLEIYGGTVLGANPYQLNNMNSAYDPGSRIAAFASGRTGAKYNVSRNF GLLIEGQYNLTGEMADNTDMFTGFNGAQYRNSTLVKTGFEWNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22686; Mature: 22686
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVITFSVLFLCSIFGYSDNNLNQQTGMYYITANNFFYRPSTERGNEVVDRQNASEFSD CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEECCCCCCCCHHHCCCCHHHHHH RISGSAINITDSLVFDAYTSSTSLIAQGSMGDLKDTKFYTQETKLVKKLWNDKLEIYGGT HHCCCEEEEEHHEEEEEECCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHCCCEEEECCE VLGANPYQLNNMNSAYDPGSRIAAFASGRTGAKYNVSRNFGLLIEGQYNLTGEMADNTDM EECCCCEEECCCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEECCCEEEECCCCCCE FTGFNGAQYRNSTLVKTGFEWNF EECCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MKKVITFSVLFLCSIFGYSDNNLNQQTGMYYITANNFFYRPSTERGNEVVDRQNASEFSD CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEECCCCCCCCHHHCCCCHHHHHH RISGSAINITDSLVFDAYTSSTSLIAQGSMGDLKDTKFYTQETKLVKKLWNDKLEIYGGT HHCCCEEEEEHHEEEEEECCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHCCCEEEECCE VLGANPYQLNNMNSAYDPGSRIAAFASGRTGAKYNVSRNFGLLIEGQYNLTGEMADNTDM EECCCCEEECCCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEEECCCEEEECCCCCCE FTGFNGAQYRNSTLVKTGFEWNF EECCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA