| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256906
Identifier: 89256906
GI number: 89256906
Start: 1558425
End: 1560131
Strand: Direct
Name: 89256906
Synonym: FTL_1629
Alternate gene names: NA
Gene position: 1558425-1560131 (Clockwise)
Preceding gene: 89256905
Following gene: 89256907
Centisome position: 82.2
GC content: 33.68
Gene sequence:
>1707_bases GTGTTTCTCAAAAACTATCAAACTATACTACGCTTCTTATACGGTGATATCAGTGATTATGAAGATGCTAATGGAATCAC TGCTGCAGATAAAAACTCGGTTAGAAAAGTAATGGTTAAATATCTAGCAAATAGCTTTGCCTATGATGATGATTTTAATT TCGAAGATCTACTAGCACAATTTAGGAGTCTAAATAAGAAGCTAAGTGTGTTACAAAGTGAGCTAAATCTATATAAACCA GATATCGCTTCAATATTAACTGATATGGGAGTTACAGGTACATATAATTATGACGTATGTGATGGTAGTGTTATGTCTTT GACAGAGGGAGCAGTTAAGCTAACTAAACTAAACTTAGATCAGCTGTATATGCTGAAAAGAATTAGCCTAGCATATAATC ATGCTTCTGCAAAACAAATAGCTAATTTAGATACAGAATATGCTAATGCACTAGCAGAACTTAGAAGTCTAGTTGCAGTG TCATCATCATGTAGATACTTCTTTAATCAAGATGCTACAGCTTGGGGTGGTGTATCGTATATGACATTCTTAGAGAGTAG ACCTGGAGTTGCATATAAGATTAAGATAGATAACCTTAATAGAGCTGAAGACTTTAATGGAAATATTGATAATTTGGTCT TTGATCCTGAGGTAAGAAAACAGTATTTAACACCCTCGCAAAATGCTTTCTTCAAGAGATTCTTAGATGATACGGATACT GGACCAACTATATATGCTCCTGATCAAGATGATACAAATGTACGCCTAATAAATGAAGATGCTGGTAGTGGTAATGCTGT CTATTTAGAAGGTTATTTTTATGTAAATCATGGTACCGATTTAGGCAGAGAAGACATAATCCTAAGAGATGATAAAAAAG ATCCATCAATCAAATATATATCATATGATGGGTTTTTCAAAGGAACTATCGACGTTGCTATTAGCCTACCTAAAGGCGTA AATCCTAGTAATTATTATATTAAAAGCTCTAGTGATGGTCGAGCGTATCAGCTATCAGAAGTTAAGGATGGTGTTACCCA TGTAACTATCAATGTTGATGCTTCAGATAAGTCTGTTAATAAGTTTGATGATGAAGTATCTATTTCACTGAGAGATATGG ATAATAATCAAATAGATTCAAAAGAGATTTTTATAAGTGTACCAGAGACAGCAATGGATATGATGCAAAGTAAATTTTCA TTCTCAGAAGATTTATTTGCTGGGCATATTGAAGAGGTATTTATTTATCCTAATAAAGAGTTTCCAGTTCCTTTCAAAGA TATGAAGTTATATGTTTATGGTTACAAAGATGGACTAAGAACAGGTCTGAGATCTTCTAGACCTTTTGAAGTGTTTGAAG AGAGATTAGAAAGTGACTTTAGAGCACCGTATGTATATCTTAGTGGGGGAGATGTAGCATTTCAAGAACTTGATGCAATT GTAATACCTTTTGATTTTAAGTATATGGAACAGAATTTAAAATATGATTGCTCAATAGGATCAGCAAAATATAGCCACGA TGAGATTTGGACTATACCTTATATGAACTATAGCTTAGCAATGCCAGACTATAAGGTATTTGATTTAAAAGTTACAAGTA GTGGAGGTAATATAGCCCAGGTTGTCTTTAACCCTGCTCCTCAAGGAACTCCTAACCCAGTTACTATATCAGTTAATGAT GAGGCAAACCGTAACTGTAGTATATAG
Upstream 100 bases:
>100_bases GCTGTCACAGCGCAAATAGATACAGATAATCAAAATATGTTGGCAAATTTTGCTAATGCACAGAAGTATAGGGCTGACAA AGATTTTACTGACTTAAAGG
Downstream 100 bases:
>100_bases TTAATCCGAGAGTATTTTGTTAAACACATAAGAGATAGCATCACAAAATTTTTCAAAACTATTATTCACTTTTCTAAATA TTTTTTTAAAGTTAGCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MFLKNYQTILRFLYGDISDYEDANGITAADKNSVRKVMVKYLANSFAYDDDFNFEDLLAQFRSLNKKLSVLQSELNLYKP DIASILTDMGVTGTYNYDVCDGSVMSLTEGAVKLTKLNLDQLYMLKRISLAYNHASAKQIANLDTEYANALAELRSLVAV SSSCRYFFNQDATAWGGVSYMTFLESRPGVAYKIKIDNLNRAEDFNGNIDNLVFDPEVRKQYLTPSQNAFFKRFLDDTDT GPTIYAPDQDDTNVRLINEDAGSGNAVYLEGYFYVNHGTDLGREDIILRDDKKDPSIKYISYDGFFKGTIDVAISLPKGV NPSNYYIKSSSDGRAYQLSEVKDGVTHVTINVDASDKSVNKFDDEVSISLRDMDNNQIDSKEIFISVPETAMDMMQSKFS FSEDLFAGHIEEVFIYPNKEFPVPFKDMKLYVYGYKDGLRTGLRSSRPFEVFEERLESDFRAPYVYLSGGDVAFQELDAI VIPFDFKYMEQNLKYDCSIGSAKYSHDEIWTIPYMNYSLAMPDYKVFDLKVTSSGGNIAQVVFNPAPQGTPNPVTISVND EANRNCSI
Sequences:
>Translated_568_residues MFLKNYQTILRFLYGDISDYEDANGITAADKNSVRKVMVKYLANSFAYDDDFNFEDLLAQFRSLNKKLSVLQSELNLYKP DIASILTDMGVTGTYNYDVCDGSVMSLTEGAVKLTKLNLDQLYMLKRISLAYNHASAKQIANLDTEYANALAELRSLVAV SSSCRYFFNQDATAWGGVSYMTFLESRPGVAYKIKIDNLNRAEDFNGNIDNLVFDPEVRKQYLTPSQNAFFKRFLDDTDT GPTIYAPDQDDTNVRLINEDAGSGNAVYLEGYFYVNHGTDLGREDIILRDDKKDPSIKYISYDGFFKGTIDVAISLPKGV NPSNYYIKSSSDGRAYQLSEVKDGVTHVTINVDASDKSVNKFDDEVSISLRDMDNNQIDSKEIFISVPETAMDMMQSKFS FSEDLFAGHIEEVFIYPNKEFPVPFKDMKLYVYGYKDGLRTGLRSSRPFEVFEERLESDFRAPYVYLSGGDVAFQELDAI VIPFDFKYMEQNLKYDCSIGSAKYSHDEIWTIPYMNYSLAMPDYKVFDLKVTSSGGNIAQVVFNPAPQGTPNPVTISVND EANRNCSI >Mature_568_residues MFLKNYQTILRFLYGDISDYEDANGITAADKNSVRKVMVKYLANSFAYDDDFNFEDLLAQFRSLNKKLSVLQSELNLYKP DIASILTDMGVTGTYNYDVCDGSVMSLTEGAVKLTKLNLDQLYMLKRISLAYNHASAKQIANLDTEYANALAELRSLVAV SSSCRYFFNQDATAWGGVSYMTFLESRPGVAYKIKIDNLNRAEDFNGNIDNLVFDPEVRKQYLTPSQNAFFKRFLDDTDT GPTIYAPDQDDTNVRLINEDAGSGNAVYLEGYFYVNHGTDLGREDIILRDDKKDPSIKYISYDGFFKGTIDVAISLPKGV NPSNYYIKSSSDGRAYQLSEVKDGVTHVTINVDASDKSVNKFDDEVSISLRDMDNNQIDSKEIFISVPETAMDMMQSKFS FSEDLFAGHIEEVFIYPNKEFPVPFKDMKLYVYGYKDGLRTGLRSSRPFEVFEERLESDFRAPYVYLSGGDVAFQELDAI VIPFDFKYMEQNLKYDCSIGSAKYSHDEIWTIPYMNYSLAMPDYKVFDLKVTSSGGNIAQVVFNPAPQGTPNPVTISVND EANRNCSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64202; Mature: 64202
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLKNYQTILRFLYGDISDYEDANGITAADKNSVRKVMVKYLANSFAYDDDFNFEDLLAQ CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH FRSLNKKLSVLQSELNLYKPDIASILTDMGVTGTYNYDVCDGSVMSLTEGAVKLTKLNLD HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCEEEEEECHH QLYMLKRISLAYNHASAKQIANLDTEYANALAELRSLVAVSSSCRYFFNQDATAWGGVSY HHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHH MTFLESRPGVAYKIKIDNLNRAEDFNGNIDNLVFDPEVRKQYLTPSQNAFFKRFLDDTDT HHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEECHHHHHHHCCCCHHHHHHHHHCCCCC GPTIYAPDQDDTNVRLINEDAGSGNAVYLEGYFYVNHGTDLGREDIILRDDKKDPSIKYI CCEEECCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCEEEECCCCCCCEEEE SYDGFFKGTIDVAISLPKGVNPSNYYIKSSSDGRAYQLSEVKDGVTHVTINVDASDKSVN EECCEEEEEEEEEEECCCCCCCCCEEEEECCCCCEEEHHHHCCCCEEEEEEECCCCCCHH KFDDEVSISLRDMDNNQIDSKEIFISVPETAMDMMQSKFSFSEDLFAGHIEEVFIYPNKE HCCCEEEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCC FPVPFKDMKLYVYGYKDGLRTGLRSSRPFEVFEERLESDFRAPYVYLSGGDVAFQELDAI CCCCHHHCEEEEEEECHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEECCCEE VIPFDFKYMEQNLKYDCSIGSAKYSHDEIWTIPYMNYSLAMPDYKVFDLKVTSSGGNIAQ EEEECHHHHHCCCCEEECCCCCCCCCCCEEEEECCCEEEECCCEEEEEEEEECCCCCEEE VVFNPAPQGTPNPVTISVNDEANRNCSI EEECCCCCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MFLKNYQTILRFLYGDISDYEDANGITAADKNSVRKVMVKYLANSFAYDDDFNFEDLLAQ CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH FRSLNKKLSVLQSELNLYKPDIASILTDMGVTGTYNYDVCDGSVMSLTEGAVKLTKLNLD HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCEEEEEECHH QLYMLKRISLAYNHASAKQIANLDTEYANALAELRSLVAVSSSCRYFFNQDATAWGGVSY HHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHH MTFLESRPGVAYKIKIDNLNRAEDFNGNIDNLVFDPEVRKQYLTPSQNAFFKRFLDDTDT HHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEECHHHHHHHCCCCHHHHHHHHHCCCCC GPTIYAPDQDDTNVRLINEDAGSGNAVYLEGYFYVNHGTDLGREDIILRDDKKDPSIKYI CCEEECCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCEEEECCCCCCCEEEE SYDGFFKGTIDVAISLPKGVNPSNYYIKSSSDGRAYQLSEVKDGVTHVTINVDASDKSVN EECCEEEEEEEEEEECCCCCCCCCEEEEECCCCCEEEHHHHCCCCEEEEEEECCCCCCHH KFDDEVSISLRDMDNNQIDSKEIFISVPETAMDMMQSKFSFSEDLFAGHIEEVFIYPNKE HCCCEEEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCC FPVPFKDMKLYVYGYKDGLRTGLRSSRPFEVFEERLESDFRAPYVYLSGGDVAFQELDAI CCCCHHHCEEEEEEECHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEECCCEE VIPFDFKYMEQNLKYDCSIGSAKYSHDEIWTIPYMNYSLAMPDYKVFDLKVTSSGGNIAQ EEEECHHHHHCCCCEEECCCCCCCCCCCEEEEECCCEEEECCCEEEEEEEEECCCCCEEE VVFNPAPQGTPNPVTISVNDEANRNCSI EEECCCCCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA