Click here to switch to the map view.

The map label for this gene is dtpA [H]

Identifier: 89256897

GI number: 89256897

Start: 1549544

End: 1550017

Strand: Reverse

Name: dtpA [H]

Synonym: FTL_1620

Alternate gene names: 89256897

Gene position: 1550017-1549544 (Counterclockwise)

Preceding gene: 89256898

Following gene: 89256893

Centisome position: 81.75

GC content: 29.32

Gene sequence:

>474_bases
ATGACTACCAAAGACATGAATCTTAGAGATCTTAGAGAAGAGAAGAAAGTTTTAGCAATTACCTCATTAGCTGAGTTTGC
TGAGCGTTATGGCTATTATATAATTCAATCATTATTGATATTTTATTTAATAGATAAGTTCCAAATTTCTCAAGATTTAT
CAGCATCTTTAGTTGGTACAACTCTTTCAATGGTTTATATCTCAGCTATTCTTGGTGGTTTTGTTGCTGAGAAGTATTTA
GGTTACTATCGTGCTGGTTTATTAGGTTCACTTTTTATGTTAGGTGGATTTTTTATATTAGCGTATTCAACTAGTCAGAG
TATGCTATATTTAGGATTAAGTTTTGTTTCTGTTAGTACTGGTCTTATAAAATCAAATATGTGTGATGATTTAGATACAT
TTATAGCTATAGCAGTATTAACAAGTCTGGCAACTTTATTACTAAGAAAATTTGTCAATAAATACTCATCATAA

Upstream 100 bases:

>100_bases
TCTGGGAAGAGCTTTTAGAATTAGAATAATCAAAATATAATTAGGCAATTATGCTATTATAGAATTTATATGAGTTTAAT
TTTAATTGTTTAGTATAAAT

Downstream 100 bases:

>100_bases
AAAACAATATTAGTAGTAGCAATTTTAAGTTTTTTGGTGTTTTTCTACTAAATAAAATGATAGCCAAACATCTGTATTTC
TAAATTTATCTATGGTTTTA

Product: proton-dependent oligopeptide transport (POT) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MTTKDMNLRDLREEKKVLAITSLAEFAERYGYYIIQSLLIFYLIDKFQISQDLSASLVGTTLSMVYISAILGGFVAEKYL
GYYRAGLLGSLFMLGGFFILAYSTSQSMLYLGLSFVSVSTGLIKSNMCDDLDTFIAIAVLTSLATLLLRKFVNKYSS

Sequences:

>Translated_157_residues
MTTKDMNLRDLREEKKVLAITSLAEFAERYGYYIIQSLLIFYLIDKFQISQDLSASLVGTTLSMVYISAILGGFVAEKYL
GYYRAGLLGSLFMLGGFFILAYSTSQSMLYLGLSFVSVSTGLIKSNMCDDLDTFIAIAVLTSLATLLLRKFVNKYSS
>Mature_156_residues
TTKDMNLRDLREEKKVLAITSLAEFAERYGYYIIQSLLIFYLIDKFQISQDLSASLVGTTLSMVYISAILGGFVAEKYLG
YYRAGLLGSLFMLGGFFILAYSTSQSMLYLGLSFVSVSTGLIKSNMCDDLDTFIAIAVLTSLATLLLRKFVNKYSS

Specific function: Proton-dependent permease that transports di- and tripeptides [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787922, Length=133, Percent_Identity=29.3233082706767, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1786927, Length=123, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 17482; Mature: 17351

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKDMNLRDLREEKKVLAITSLAEFAERYGYYIIQSLLIFYLIDKFQISQDLSASLVGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLSMVYISAILGGFVAEKYLGYYRAGLLGSLFMLGGFFILAYSTSQSMLYLGLSFVSVST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GLIKSNMCDDLDTFIAIAVLTSLATLLLRKFVNKYSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTKDMNLRDLREEKKVLAITSLAEFAERYGYYIIQSLLIFYLIDKFQISQDLSASLVGT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLSMVYISAILGGFVAEKYLGYYRAGLLGSLFMLGGFFILAYSTSQSMLYLGLSFVSVST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GLIKSNMCDDLDTFIAIAVLTSLATLLLRKFVNKYSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]