| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is yfgA [C]
Identifier: 89256867
GI number: 89256867
Start: 1518304
End: 1518984
Strand: Reverse
Name: yfgA [C]
Synonym: FTL_1590
Alternate gene names: 89256867
Gene position: 1518984-1518304 (Counterclockwise)
Preceding gene: 89256868
Following gene: 89256866
Centisome position: 80.12
GC content: 29.81
Gene sequence:
>681_bases ATGCATAATTTTCAATTTTTTCTTAAAAGTGTTAGAGATTCTCGGGAGCTTAAACGAGAAACTATCGCTGATGCTATTAA TCTATCAGTAGAGACTATACAACTTATAGAAGAAGCCGATAATAATAGTTTATTATTAAACTCTAGTAGTGTACTTAAGA ATCAAATTAGAAGATATTGTGAGTATTTAGAAATTCCCGAGAAAAAAATAGTATCGATACTTAATAAAATTGATATCCTT TATTATAAGAAATCACGCTATGGTAAGCTGAAGTTTTTTGACTATATTAATAGATTAGCGATATTAGTAATAGCTATAAC AATAATTGTTTTAGTAACTAAACATATTAGAGAAAATGTAGATACTGTAACTCCAGAAAATTCAAAGTCTACTATTATAT ATACTCCTATCAATTATGATATTAATAATTCTGAGCAACAGCAGTCAACTGTATCTTCAAATACTAATAACACCAAAACT ACTGATGATATAAATTCTACTGCTAGTCATATAGATACTACTAAAGCTAGTCAGCTAACAGCAGCTACAGCAACTAATGC TCCTACTATAGATACTTCAGCAGTTGCCTCAAAAACATTAGTAGCTCATCCACCAACTACGGCAAATATCAATAATGTTG TGATTGATGATCAAACAGCTGCTCGACAGCAATCAGAATAA
Upstream 100 bases:
>100_bases TAAATAACTAAGTCTATCTTTATATATATCTGCATTTAATTTTTACCTTTTTTCTTATATAATTTTGACTAGTATTAAAT AACTAGTTTATTGTAAAATT
Downstream 100 bases:
>100_bases TTAGATACAAATATAAAGTTATAAAATGAATCTTTTAAACAATATACTCTTAAGAGTCGAGAACTATTCGACTACATATA TACTTTTGATTGACTTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MHNFQFFLKSVRDSRELKRETIADAINLSVETIQLIEEADNNSLLLNSSSVLKNQIRRYCEYLEIPEKKIVSILNKIDIL YYKKSRYGKLKFFDYINRLAILVIAITIIVLVTKHIRENVDTVTPENSKSTIIYTPINYDINNSEQQQSTVSSNTNNTKT TDDINSTASHIDTTKASQLTAATATNAPTIDTSAVASKTLVAHPPTTANINNVVIDDQTAARQQSE
Sequences:
>Translated_226_residues MHNFQFFLKSVRDSRELKRETIADAINLSVETIQLIEEADNNSLLLNSSSVLKNQIRRYCEYLEIPEKKIVSILNKIDIL YYKKSRYGKLKFFDYINRLAILVIAITIIVLVTKHIRENVDTVTPENSKSTIIYTPINYDINNSEQQQSTVSSNTNNTKT TDDINSTASHIDTTKASQLTAATATNAPTIDTSAVASKTLVAHPPTTANINNVVIDDQTAARQQSE >Mature_226_residues MHNFQFFLKSVRDSRELKRETIADAINLSVETIQLIEEADNNSLLLNSSSVLKNQIRRYCEYLEIPEKKIVSILNKIDIL YYKKSRYGKLKFFDYINRLAILVIAITIIVLVTKHIRENVDTVTPENSKSTIIYTPINYDINNSEQQQSTVSSNTNNTKT TDDINSTASHIDTTKASQLTAATATNAPTIDTSAVASKTLVAHPPTTANINNVVIDDQTAARQQSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25352; Mature: 25352
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNFQFFLKSVRDSRELKRETIADAINLSVETIQLIEEADNNSLLLNSSSVLKNQIRRYC CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHH EYLEIPEKKIVSILNKIDILYYKKSRYGKLKFFDYINRLAILVIAITIIVLVTKHIRENV HHHCCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DTVTPENSKSTIIYTPINYDINNSEQQQSTVSSNTNNTKTTDDINSTASHIDTTKASQLT CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH AATATNAPTIDTSAVASKTLVAHPPTTANINNVVIDDQTAARQQSE HHHCCCCCCCCHHHHHHCCEEECCCCCCCCCEEEECCCHHHHCCCC >Mature Secondary Structure MHNFQFFLKSVRDSRELKRETIADAINLSVETIQLIEEADNNSLLLNSSSVLKNQIRRYC CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHH EYLEIPEKKIVSILNKIDILYYKKSRYGKLKFFDYINRLAILVIAITIIVLVTKHIRENV HHHCCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DTVTPENSKSTIIYTPINYDINNSEQQQSTVSSNTNNTKTTDDINSTASHIDTTKASQLT CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH AATATNAPTIDTSAVASKTLVAHPPTTANINNVVIDDQTAARQQSE HHHCCCCCCCCHHHHHHCCEEECCCCCCCCCEEEECCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA