| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256782
Identifier: 89256782
GI number: 89256782
Start: 1421671
End: 1422879
Strand: Direct
Name: 89256782
Synonym: FTL_1493
Alternate gene names: NA
Gene position: 1421671-1422879 (Clockwise)
Preceding gene: 89256781
Following gene: 89256784
Centisome position: 74.98
GC content: 30.69
Gene sequence:
>1209_bases ATGACAGTACAGGCACTAGGTCAAGGATGTGCCTTTATTACTGCTATTCTTTTAGCCAGACATCTAACAATTAGCGATTA TGGTTTTTATATTTTTGGCGTAACAGTTGCAACTATTTTAGCTGTAATCGCAACAATGGGTGGCGGTGGTATCTTAGCAC GCACTTGGGGTAAATCAGAATTAGTCGATAAATTTCAAAGAAACAAAGAAACTTTTTTAGTTCATAACTGGTATTTCAAG CGCGGCTTCACTATAGTAATTATAATAATTGCTATAATATTTTTTTATAACCATTCTAAACACCATGATAACTCAATAGA AAATTTTACATTATTATTTGCTATACCATTTTTTATGGCAAATATATTTCAATCTTTTTTTGTTGCCAGAAGAGTCGTTA TCCTTGCTAACTTCCTTCAACTTAGTCTGCGAATTATAATGCTCTTGTTGACTATAGTTTTTATGTCTTTGTACATAAAA GATACTGCTTTGCTTATTGGTACAATGATGATTATAATGACAATATATACAACATCTATTTGGCTTAGCCAAACATCAAA ATATACTTTCACCAGCTCAAAGCCAATCGGTAGTAATATCTCATTTGCTCTAATGCAATGGGGATTATTATTACTATCAC AAATCGATATCATAATCTTAAAAGTACTAGCAACTCCCGCAGATGTCGCTCTCTACGGTGTAGCACTACAACTTGGCGCA TTAGTTATTTTTGTATTAAATGCGGTTAATTCAAATGTCCTATCACAAATTGCTGATGATTATAAAAACTGCTCTAGAAA AGAATTTCAAAATAAAATAACTTCTTATACTAGAATTATCTTTATACTCTCAATATTTGCTATTTTAGGAATTATTATTT GTGGATATCCAATTACTTTAATGTATGGTAAACAATATACCGCATCATATTTTATCTTTTGTATATTAATGGTTGGGCAA ATAGTAAATGTTCTATCTGGTTGCGTTGCTACGATTCTAAATATGGCAGGATATGAGAAAAGTACATGTTTTGCTTTCTA TATTGCACTTGCTATTAATATATTGCTAGGAGTAGTTTTTACGCTTTATTGGGGTGTATATGGTCTTGCAATTGCCTCAA GCTTATCAATGATATATTGGAATATTCATCTACTTTACAAAGTAATTACACAGATAAAAATTAACCCAACAATATTTATA ATTAGATAA
Upstream 100 bases:
>100_bases ATACTTTACTGTTAAAATCTTTTTAGAGGTAATTCAATACTAAAACAAATTGATTAAAAAAATACTTTCTAATCATATTC TATCTAAGTCTTTACAAACT
Downstream 100 bases:
>100_bases AACCTAATCTACAGAGTTATTACTAGTAGCAGCATTATTGAGTGTTTTTGAAACATTATTAACGGCTTTGTTAACTGTCT CTTTAGCAACTTTTATAGGC
Product: polysaccharide biosynthesis protein (export protein)
Products: NA
Alternate protein names: Multidrug/Oligosaccharidyl-Lipid/Polysaccharide Transporter
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTVQALGQGCAFITAILLARHLTISDYGFYIFGVTVATILAVIATMGGGGILARTWGKSELVDKFQRNKETFLVHNWYFK RGFTIVIIIIAIIFFYNHSKHHDNSIENFTLLFAIPFFMANIFQSFFVARRVVILANFLQLSLRIIMLLLTIVFMSLYIK DTALLIGTMMIIMTIYTTSIWLSQTSKYTFTSSKPIGSNISFALMQWGLLLLSQIDIIILKVLATPADVALYGVALQLGA LVIFVLNAVNSNVLSQIADDYKNCSRKEFQNKITSYTRIIFILSIFAILGIIICGYPITLMYGKQYTASYFIFCILMVGQ IVNVLSGCVATILNMAGYEKSTCFAFYIALAINILLGVVFTLYWGVYGLAIASSLSMIYWNIHLLYKVITQIKINPTIFI IR
Sequences:
>Translated_402_residues MTVQALGQGCAFITAILLARHLTISDYGFYIFGVTVATILAVIATMGGGGILARTWGKSELVDKFQRNKETFLVHNWYFK RGFTIVIIIIAIIFFYNHSKHHDNSIENFTLLFAIPFFMANIFQSFFVARRVVILANFLQLSLRIIMLLLTIVFMSLYIK DTALLIGTMMIIMTIYTTSIWLSQTSKYTFTSSKPIGSNISFALMQWGLLLLSQIDIIILKVLATPADVALYGVALQLGA LVIFVLNAVNSNVLSQIADDYKNCSRKEFQNKITSYTRIIFILSIFAILGIIICGYPITLMYGKQYTASYFIFCILMVGQ IVNVLSGCVATILNMAGYEKSTCFAFYIALAINILLGVVFTLYWGVYGLAIASSLSMIYWNIHLLYKVITQIKINPTIFI IR >Mature_401_residues TVQALGQGCAFITAILLARHLTISDYGFYIFGVTVATILAVIATMGGGGILARTWGKSELVDKFQRNKETFLVHNWYFKR GFTIVIIIIAIIFFYNHSKHHDNSIENFTLLFAIPFFMANIFQSFFVARRVVILANFLQLSLRIIMLLLTIVFMSLYIKD TALLIGTMMIIMTIYTTSIWLSQTSKYTFTSSKPIGSNISFALMQWGLLLLSQIDIIILKVLATPADVALYGVALQLGAL VIFVLNAVNSNVLSQIADDYKNCSRKEFQNKITSYTRIIFILSIFAILGIIICGYPITLMYGKQYTASYFIFCILMVGQI VNVLSGCVATILNMAGYEKSTCFAFYIALAINILLGVVFTLYWGVYGLAIASSLSMIYWNIHLLYKVITQIKINPTIFII R
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45155; Mature: 45024
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQALGQGCAFITAILLARHLTISDYGFYIFGVTVATILAVIATMGGGGILARTWGKSE CCHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH LVDKFQRNKETFLVHNWYFKRGFTIVIIIIAIIFFYNHSKHHDNSIENFTLLFAIPFFMA HHHHHHCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH NIFQSFFVARRVVILANFLQLSLRIIMLLLTIVFMSLYIKDTALLIGTMMIIMTIYTTSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLSQTSKYTFTSSKPIGSNISFALMQWGLLLLSQIDIIILKVLATPADVALYGVALQLGA HHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LVIFVLNAVNSNVLSQIADDYKNCSRKEFQNKITSYTRIIFILSIFAILGIIICGYPITL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE MYGKQYTASYFIFCILMVGQIVNVLSGCVATILNMAGYEKSTCFAFYIALAINILLGVVF EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH TLYWGVYGLAIASSLSMIYWNIHLLYKVITQIKINPTIFIIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure TVQALGQGCAFITAILLARHLTISDYGFYIFGVTVATILAVIATMGGGGILARTWGKSE CHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH LVDKFQRNKETFLVHNWYFKRGFTIVIIIIAIIFFYNHSKHHDNSIENFTLLFAIPFFMA HHHHHHCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH NIFQSFFVARRVVILANFLQLSLRIIMLLLTIVFMSLYIKDTALLIGTMMIIMTIYTTSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLSQTSKYTFTSSKPIGSNISFALMQWGLLLLSQIDIIILKVLATPADVALYGVALQLGA HHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LVIFVLNAVNSNVLSQIADDYKNCSRKEFQNKITSYTRIIFILSIFAILGIIICGYPITL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE MYGKQYTASYFIFCILMVGQIVNVLSGCVATILNMAGYEKSTCFAFYIALAINILLGVVF EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH TLYWGVYGLAIASSLSMIYWNIHLLYKVITQIKINPTIFIIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA