| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is yicG [C]
Identifier: 89256774
GI number: 89256774
Start: 1411599
End: 1412249
Strand: Direct
Name: yicG [C]
Synonym: FTL_1485
Alternate gene names: 89256774
Gene position: 1411599-1412249 (Clockwise)
Preceding gene: 89256773
Following gene: 89256776
Centisome position: 74.45
GC content: 32.26
Gene sequence:
>651_bases ATGTATCACGTCGGTATCACTGGACCTTTTATTTTTTCAGTTATGTTTCTTTTAGGCATAATTGCCGAGAGTATGACTGG TGTTATATCATCGTCTCGTAGAAACATGGATGCTTTTGGGGTTGTTGCAATAGCACTTACAACAGCTTTAGGAGGTGGTG TTGTTAGAGATGTTCTATTAGGTAATTTACCAGTAACTATTATACTTTATCCGCACTATATTGTGATATGCCTATTTTTC TCAATTATTGCTATTTTCACGCAAAAATATATTAATAAGTTTTATAAAGTATTTTTGATTCTCGATTCAATTGGTCTAAT TGCTTTTGCCTATATTGGTAGCAGTATAGCACATCAAATTTGTACACAAGTTTTTCATATGCAGTTTTTTAGTGTTCTGA TTGTTGGTATTGTTATCGCAATACTTAACGGCGTTGCTGGTGGAATAATGCGCGATATGATCTGTAATGATATCCCTGTT GCCTTTAAATCTGAATTATATGCATCTGTCGCAGCAATAGTCGGTGCAATGAATATCATATTTATATATTTAGATATAAA TTTATACATAAGCGCGTCACTGATAATAGGCATTGGTTTAACAGTGAGAATTATGTCAATAATTTATAAGTGGAAATTAC CAATTATATAA
Upstream 100 bases:
>100_bases AAATTCTACAAATATTTCAGCAAAATTAGTATCAAAAAATCATTTAAATTCTAAAAATAATCTCTAAAATATAGCCAACT TAGCTTGTCGGAAATAACAT
Downstream 100 bases:
>100_bases TAATATAGAATTATAAATACTAGAAATGCTAATAACAAAAAATTTTGAAGTTTTAAATACCACTATGAAAACGAAACTCA CTATCAGTAGATAGTATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MYHVGITGPFIFSVMFLLGIIAESMTGVISSSRRNMDAFGVVAIALTTALGGGVVRDVLLGNLPVTIILYPHYIVICLFF SIIAIFTQKYINKFYKVFLILDSIGLIAFAYIGSSIAHQICTQVFHMQFFSVLIVGIVIAILNGVAGGIMRDMICNDIPV AFKSELYASVAAIVGAMNIIFIYLDINLYISASLIIGIGLTVRIMSIIYKWKLPII
Sequences:
>Translated_216_residues MYHVGITGPFIFSVMFLLGIIAESMTGVISSSRRNMDAFGVVAIALTTALGGGVVRDVLLGNLPVTIILYPHYIVICLFF SIIAIFTQKYINKFYKVFLILDSIGLIAFAYIGSSIAHQICTQVFHMQFFSVLIVGIVIAILNGVAGGIMRDMICNDIPV AFKSELYASVAAIVGAMNIIFIYLDINLYISASLIIGIGLTVRIMSIIYKWKLPII >Mature_216_residues MYHVGITGPFIFSVMFLLGIIAESMTGVISSSRRNMDAFGVVAIALTTALGGGVVRDVLLGNLPVTIILYPHYIVICLFF SIIAIFTQKYINKFYKVFLILDSIGLIAFAYIGSSIAHQICTQVFHMQFFSVLIVGIVIAILNGVAGGIMRDMICNDIPV AFKSELYASVAAIVGAMNIIFIYLDINLYISASLIIGIGLTVRIMSIIYKWKLPII
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=161, Percent_Identity=39.7515527950311, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1786352, Length=194, Percent_Identity=27.8350515463918, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 23614; Mature: 23614
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHVGITGPFIFSVMFLLGIIAESMTGVISSSRRNMDAFGVVAIALTTALGGGVVRDVLL CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHH GNLPVTIILYPHYIVICLFFSIIAIFTQKYINKFYKVFLILDSIGLIAFAYIGSSIAHQI CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CTQVFHMQFFSVLIVGIVIAILNGVAGGIMRDMICNDIPVAFKSELYASVAAIVGAMNII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FIYLDINLYISASLIIGIGLTVRIMSIIYKWKLPII HEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYHVGITGPFIFSVMFLLGIIAESMTGVISSSRRNMDAFGVVAIALTTALGGGVVRDVLL CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHH GNLPVTIILYPHYIVICLFFSIIAIFTQKYINKFYKVFLILDSIGLIAFAYIGSSIAHQI CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CTQVFHMQFFSVLIVGIVIAILNGVAGGIMRDMICNDIPVAFKSELYASVAAIVGAMNII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FIYLDINLYISASLIIGIGLTVRIMSIIYKWKLPII HEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]