Click here to switch to the map view.

The map label for this gene is hslR [H]

Identifier: 89256674

GI number: 89256674

Start: 1308905

End: 1309273

Strand: Direct

Name: hslR [H]

Synonym: FTL_1375

Alternate gene names: 89256674

Gene position: 1308905-1309273 (Clockwise)

Preceding gene: 89256673

Following gene: 89256679

Centisome position: 69.04

GC content: 30.89

Gene sequence:

>369_bases
ATGAGTGTAAGACTAGATAAATGGTTATGGGCTACTAGATTCTACAAAACTAGAGCTTTAGCAAAAAAAGCTATCGAAGG
TGGCAAAGTACACTTTCAAGGACAAAAAACAAAAGTAAGTAAAATTGTAAATATTGGCGATACCTATCAAATTCAACAAG
GTTATATAAAAAAGACCGTAATTGTTGAAGCTTTAGATGAAGTTAGAAAGTCTGCTAGTGAAGCACAAAAGCTCTATAGA
GAAACTGCTGAAAGTATCGAAAAAAGAGAACAAGAAACAATTATTAGAAAAACTGCCAATCTAATAAGTCCAGAAAAACC
TACAAAAAAACAGCGTAGACAAATAATTGATTTTAAAAGAAATGATTAG

Upstream 100 bases:

>100_bases
GTCGTTGGTAATAAGTTTGCTAAATTAAATAAGTTAGATTTTTTTTATGCACAGAAACTAGTTATAATCAAAACTATCTT
TTAAGCAATATTTTATATAA

Downstream 100 bases:

>100_bases
CTTGTAATGAAAATTTATGCGTATAACATAGTTTCTATATGAATAAATTCAATACTTCACAAACCTCCTCAGCGACCCCA
CTAGGAAATATCCCAATATA

Product: heat shock protein 15 (HSP15)

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSVRLDKWLWATRFYKTRALAKKAIEGGKVHFQGQKTKVSKIVNIGDTYQIQQGYIKKTVIVEALDEVRKSASEAQKLYR
ETAESIEKREQETIIRKTANLISPEKPTKKQRRQIIDFKRND

Sequences:

>Translated_122_residues
MSVRLDKWLWATRFYKTRALAKKAIEGGKVHFQGQKTKVSKIVNIGDTYQIQQGYIKKTVIVEALDEVRKSASEAQKLYR
ETAESIEKREQETIIRKTANLISPEKPTKKQRRQIIDFKRND
>Mature_121_residues
SVRLDKWLWATRFYKTRALAKKAIEGGKVHFQGQKTKVSKIVNIGDTYQIQQGYIKKTVIVEALDEVRKSASEAQKLYRE
TAESIEKREQETIIRKTANLISPEKPTKKQRRQIIDFKRND

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=125, Percent_Identity=55.2, Blast_Score=139, Evalue=8e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 14267; Mature: 14135

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRLDKWLWATRFYKTRALAKKAIEGGKVHFQGQKTKVSKIVNIGDTYQIQQGYIKKTV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHH
IVEALDEVRKSASEAQKLYRETAESIEKREQETIIRKTANLISPEKPTKKQRRQIIDFKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
ND
CC
>Mature Secondary Structure 
SVRLDKWLWATRFYKTRALAKKAIEGGKVHFQGQKTKVSKIVNIGDTYQIQQGYIKKTV
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHH
IVEALDEVRKSASEAQKLYRETAESIEKREQETIIRKTANLISPEKPTKKQRRQIIDFKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
ND
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]