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The map label for this gene is speA [H]

Identifier: 89255908

GI number: 89255908

Start: 486393

End: 487703

Strand: Direct

Name: speA [H]

Synonym: FTL_0501

Alternate gene names: 89255908

Gene position: 486393-487703 (Clockwise)

Preceding gene: 89255907

Following gene: 89255909

Centisome position: 25.65

GC content: 30.36

Gene sequence:

>1311_bases
TTGGATTATGAGGTAGGTACTAAATCTGAGTTTTTAGCTGTGCTAAGTACAGCAGCTAAAACACAAAAGATTATTTGTAA
TGGTTTTAAAGATCTTAGTTTTTATAAAATAGCACAGCTAGCTGCAAAAATAGGCTATAAAATTATAATAGTTATTGAAA
ACATTAGTGAAATAAATATTATTCAGGATCTTCTAGACAACAATGTAAATATCAAGTTTGATTTTGGCATTAGGACAAAG
CCTTTTGATAATTGCATACATACCCAAAAATTTGGCTTAAGTTTATCCCAAATCAACGAGTGTATTAATTTCTTGAAAAC
TAATCAGCTCCAACAAAAACTACTTTTATTGCACAGTCATATAGGCTCTCAGCTAAAGTCAACTGATAAAGTAGTTGCTA
ATATCCAAAGATTAATGAGGATTTATTCAGAATTAAAAAGTGATTTTGTAAATCTTGAGTATATTGATTTTGGTGGTGGT
CTAGTAGTTAATTATGATGAATATGATAGACCAAGTTATGATTTTGATAGTTATGCTAAAAATATTATCAAAAATTGTAA
ATACTATGCTGAATATTATAACTGTGATATGCCAAGCATAGTTACAGAGTCTGGAAGAGCAATCACAGCAGAGTCAAGTT
TGTTAATAACAAAACCACTGATAAAACAGCATGAGTCAGATATTGAGAATGAAATCCTACATCAGCAGTGGTTAGATAGA
GAAGTGTCGCTTAGTGAACTACAGAGTTACTTACCACAAAATCAAAAAAATACTCAGCAAGCGTGGTTAAATTTTTCAAT
ATTTCAATCATTACTTGATCATTGGGGCATAGACCAAAAATTTCCGATACTTCCTTTGGAGTTTTTTAATAGCTATGTGA
CCTCAGAAGTTAAACTTTATGATATTTCATATGATGTTGATGGTGTAGTAAAGTCAACTTCAGAATATATTGAGATAGCT
ACTGATAATATTGAATATATTGTTTTTATGTGTGTGGGTGCTTATCAGGGGATGTTAAGCGCTAAGCATAATATGCTTGG
AAATATTAGTGCGGTGAATATATATATAGATGAAAATAGAAAAGTAAAAGTATCTGTAAAAGCTGCGGAAAATTACTATT
CATTGTTAGATCAATATGGTTATAACTCTCTGAGGATACAGTCAAATTTAAAAAGATACTATTATTATCACCAAGAGGAA
ATAAACCAAGAGGAAGAAGAATTTTTAGACAATTTATTTATTGATAATCCATATATGGGCGAGATAACTAGTCAACAAGG
AGGAATAAATTATGCTATTATGGCCGGCTGA

Upstream 100 bases:

>100_bases
CTATACAGGTAAATATAGTTTAGCTTATCCGATAAAAATAAATCCTGAACAAAAGATTATAAAGGCAATTTATGATTATC
ATCAACATAATCAAGTTAGT

Downstream 100 bases:

>100_bases
ATGGGAGGAGCATAGTGCAACTTGGATGATCTGGCCAGCACGTATAGATATGTGGCCAAATATAACAAAAGCCTATGAGA
TATATGCTAAAGTTGCTAAC

Product: putative arginine decarboxylase

Products: NA

Alternate protein names: ADC [H]

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEINIIQDLLDNNVNIKFDFGIRTK
PFDNCIHTQKFGLSLSQINECINFLKTNQLQQKLLLLHSHIGSQLKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGG
LVVNYDEYDRPSYDFDSYAKNIIKNCKYYAEYYNCDMPSIVTESGRAITAESSLLITKPLIKQHESDIENEILHQQWLDR
EVSLSELQSYLPQNQKNTQQAWLNFSIFQSLLDHWGIDQKFPILPLEFFNSYVTSEVKLYDISYDVDGVVKSTSEYIEIA
TDNIEYIVFMCVGAYQGMLSAKHNMLGNISAVNIYIDENRKVKVSVKAAENYYSLLDQYGYNSLRIQSNLKRYYYYHQEE
INQEEEEFLDNLFIDNPYMGEITSQQGGINYAIMAG

Sequences:

>Translated_436_residues
MDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEINIIQDLLDNNVNIKFDFGIRTK
PFDNCIHTQKFGLSLSQINECINFLKTNQLQQKLLLLHSHIGSQLKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGG
LVVNYDEYDRPSYDFDSYAKNIIKNCKYYAEYYNCDMPSIVTESGRAITAESSLLITKPLIKQHESDIENEILHQQWLDR
EVSLSELQSYLPQNQKNTQQAWLNFSIFQSLLDHWGIDQKFPILPLEFFNSYVTSEVKLYDISYDVDGVVKSTSEYIEIA
TDNIEYIVFMCVGAYQGMLSAKHNMLGNISAVNIYIDENRKVKVSVKAAENYYSLLDQYGYNSLRIQSNLKRYYYYHQEE
INQEEEEFLDNLFIDNPYMGEITSQQGGINYAIMAG
>Mature_436_residues
MDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEINIIQDLLDNNVNIKFDFGIRTK
PFDNCIHTQKFGLSLSQINECINFLKTNQLQQKLLLLHSHIGSQLKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGG
LVVNYDEYDRPSYDFDSYAKNIIKNCKYYAEYYNCDMPSIVTESGRAITAESSLLITKPLIKQHESDIENEILHQQWLDR
EVSLSELQSYLPQNQKNTQQAWLNFSIFQSLLDHWGIDQKFPILPLEFFNSYVTSEVKLYDISYDVDGVVKSTSEYIEIA
TDNIEYIVFMCVGAYQGMLSAKHNMLGNISAVNIYIDENRKVKVSVKAAENYYSLLDQYGYNSLRIQSNLKRYYYYHQEE
INQEEEEFLDNLFIDNPYMGEITSQQGGINYAIMAG

Specific function: Catalyzes the biosynthesis of agmatine from arginine [H]

COG id: COG1166

COG function: function code E; Arginine decarboxylase (spermidine biosynthesis)

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789307, Length=471, Percent_Identity=28.2377919320594, Blast_Score=183, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009006
- InterPro:   IPR002985
- InterPro:   IPR022643
- InterPro:   IPR022644
- InterPro:   IPR000183 [H]

Pfam domain/function: PF02784 Orn_Arg_deC_N; PF00278 Orn_DAP_Arg_deC [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 50341; Mature: 50341

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEINI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHH
IQDLLDNNVNIKFDFGIRTKPFDNCIHTQKFGLSLSQINECINFLKTNQLQQKLLLLHSH
HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSQLKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLVVNYDEYDRPSYDFDSYAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHH
NIIKNCKYYAEYYNCDMPSIVTESGRAITAESSLLITKPLIKQHESDIENEILHQQWLDR
HHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCC
EVSLSELQSYLPQNQKNTQQAWLNFSIFQSLLDHWGIDQKFPILPLEFFNSYVTSEVKLY
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEE
DISYDVDGVVKSTSEYIEIATDNIEYIVFMCVGAYQGMLSAKHNMLGNISAVNIYIDENR
EECCCCCHHHHCCHHHEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCC
KVKVSVKAAENYYSLLDQYGYNSLRIQSNLKRYYYYHQEEINQEEEEFLDNLFIDNPYMG
EEEEEEEEHHHHHHHHHHCCCCEEEEHHHHHHHHEECHHHCCCHHHHHHHHHCCCCCCCC
EITSQQGGINYAIMAG
CCCCCCCCCCEEEEEC
>Mature Secondary Structure
MDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEINI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHH
IQDLLDNNVNIKFDFGIRTKPFDNCIHTQKFGLSLSQINECINFLKTNQLQQKLLLLHSH
HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSQLKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLVVNYDEYDRPSYDFDSYAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHH
NIIKNCKYYAEYYNCDMPSIVTESGRAITAESSLLITKPLIKQHESDIENEILHQQWLDR
HHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCC
EVSLSELQSYLPQNQKNTQQAWLNFSIFQSLLDHWGIDQKFPILPLEFFNSYVTSEVKLY
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEE
DISYDVDGVVKSTSEYIEIATDNIEYIVFMCVGAYQGMLSAKHNMLGNISAVNIYIDENR
EECCCCCHHHHCCHHHEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCC
KVKVSVKAAENYYSLLDQYGYNSLRIQSNLKRYYYYHQEEINQEEEEFLDNLFIDNPYMG
EEEEEEEEHHHHHHHHHHCCCCEEEEHHHHHHHHEECHHHCCCHHHHHHHHHCCCCCCCC
EITSQQGGINYAIMAG
CCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA