| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255880
Identifier: 89255880
GI number: 89255880
Start: 444418
End: 444801
Strand: Direct
Name: 89255880
Synonym: FTL_0470
Alternate gene names: NA
Gene position: 444418-444801 (Clockwise)
Preceding gene: 89255876
Following gene: 89255881
Centisome position: 23.44
GC content: 28.91
Gene sequence:
>384_bases ATGGCAAAAGTATTTTTTTTATTAAAACACCAGTTGTCTATAATTAGAGGTAAATTATGGTTTCAGCCTATAACTTATAG TATTTTAGCAGTAATAAGTATTTACAGCTGCTATCTACTTCAAAACTATGAGTTTTCATTTTACCCCTATAAAGTTAACC TTGAAACAGTCAATCACTTACTTTCAATTATTACCACAACTATGCTTACAATAACAGTATTTGTGGTAAGTTCTATAGTA AGTGCTTATAATTCAGCTAGTAGTGTTGGTACCCCTCGTATATTAAACTTATTATTAAGAGATAGTTCTTCACAAAATGC TCACTCTAAATTTATTGGTGCTTTTATTTATGGAGTTATTGCTACTATTGGTATTAAGTCATAG
Upstream 100 bases:
>100_bases TGTTAATATTAAATAAGTTAAAAATTAAAATAAATTATTAAGGTATGTAATTTAAGTTTGTATGTGACTTTTTTAAAATC CTTTAAGGAAGAGAGTCTAA
Downstream 100 bases:
>100_bases ATATTTAACCAAAATGGTATATTCTTTATTTTTATAACTACTATTTTAGTGTTTATTATAGTAATTTCTACTTTTATAAT TTGGATAGATGATATTGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MAKVFFLLKHQLSIIRGKLWFQPITYSILAVISIYSCYLLQNYEFSFYPYKVNLETVNHLLSIITTTMLTITVFVVSSIV SAYNSASSVGTPRILNLLLRDSSSQNAHSKFIGAFIYGVIATIGIKS
Sequences:
>Translated_127_residues MAKVFFLLKHQLSIIRGKLWFQPITYSILAVISIYSCYLLQNYEFSFYPYKVNLETVNHLLSIITTTMLTITVFVVSSIV SAYNSASSVGTPRILNLLLRDSSSQNAHSKFIGAFIYGVIATIGIKS >Mature_126_residues AKVFFLLKHQLSIIRGKLWFQPITYSILAVISIYSCYLLQNYEFSFYPYKVNLETVNHLLSIITTTMLTITVFVVSSIVS AYNSASSVGTPRILNLLLRDSSSQNAHSKFIGAFIYGVIATIGIKS
Specific function: Unknown
COG id: COG4325
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14236; Mature: 14105
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVFFLLKHQLSIIRGKLWFQPITYSILAVISIYSCYLLQNYEFSFYPYKVNLETVNHL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHH LSIITTTMLTITVFVVSSIVSAYNSASSVGTPRILNLLLRDSSSQNAHSKFIGAFIYGVI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ATIGIKS HHHCCCC >Mature Secondary Structure AKVFFLLKHQLSIIRGKLWFQPITYSILAVISIYSCYLLQNYEFSFYPYKVNLETVNHL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHH LSIITTTMLTITVFVVSSIVSAYNSASSVGTPRILNLLLRDSSSQNAHSKFIGAFIYGVI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ATIGIKS HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA