Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89255871

Identifier: 89255871

GI number: 89255871

Start: 434974

End: 435639

Strand: Direct

Name: 89255871

Synonym: FTL_0461

Alternate gene names: NA

Gene position: 434974-435639 (Clockwise)

Preceding gene: 89255870

Following gene: 89255872

Centisome position: 22.94

GC content: 29.43

Gene sequence:

>666_bases
ATGATAAAAAATGCTTCTGATCGACTTATATTGATTAGTCCATACTTAAAGCTAAATGACCGTATTAAAGAATTATTAGA
AGATAAAAATAGACTGAAAATAGATGTAAGAATTGTCTATGGAAAAAGTGAATTGCAGCCAGCAGAAATAAGTTGGTTAA
ATGAGCTTACATTTGTTAGAACTAGTTTTTGTAAAAATTTACATGCAAAATGTTATATGAATGAAACATCTTGTATAATC
ACTAGTCTGAATCTTTACGAATTCAGTCAAATTAATAATAATGAAATGGGTGTGTATATTTCTCGTGATGATGATTCTGA
AATGTATCGAGAGACTTATGATGAAGCTCAAAGAATAATTAGAATTAGTGAAGAAGTTAGGATTTCTTTACAAAAAATAG
ATAAATCAAAGCAGGATAATGTAGTTGATAAAGGTGCTAACCAAGTTGAAAGTGAGGCTGTTAAGCTTACTTCATCTAAG
CTTGCTAGTAAATATAAAATCAAAACAGCAGATTTGATGGAAAAATTAGTACTTCTTGAATTTGTGATAAAAGATAAAAA
TGGCGAATATCACCTTACAGAAAAAGGTATTTTAGTTGGCGGTGAGGCTAAGAAAGGGAGATATGGAGATTACATTATGT
GGCCTGAAAGTTTAGTAATAGAATAA

Upstream 100 bases:

>100_bases
GAGTTAATTAATAAAAGTTATAAATATATCTTATGTAAAAGGAGTTGTATGAATCGCTAAATTTTTAAATACGAGTGCTA
CAAACTATTATTTGGAAGAA

Downstream 100 bases:

>100_bases
GTACTATTAAATTTGAAATGAAATATAATTGTAAAGTTAGTGCTTGTGATACGTACTAGCGCTTATGATCCTAGCATACT
AAAAGCTGTTAATATATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MIKNASDRLILISPYLKLNDRIKELLEDKNRLKIDVRIVYGKSELQPAEISWLNELTFVRTSFCKNLHAKCYMNETSCII
TSLNLYEFSQINNNEMGVYISRDDDSEMYRETYDEAQRIIRISEEVRISLQKIDKSKQDNVVDKGANQVESEAVKLTSSK
LASKYKIKTADLMEKLVLLEFVIKDKNGEYHLTEKGILVGGEAKKGRYGDYIMWPESLVIE

Sequences:

>Translated_221_residues
MIKNASDRLILISPYLKLNDRIKELLEDKNRLKIDVRIVYGKSELQPAEISWLNELTFVRTSFCKNLHAKCYMNETSCII
TSLNLYEFSQINNNEMGVYISRDDDSEMYRETYDEAQRIIRISEEVRISLQKIDKSKQDNVVDKGANQVESEAVKLTSSK
LASKYKIKTADLMEKLVLLEFVIKDKNGEYHLTEKGILVGGEAKKGRYGDYIMWPESLVIE
>Mature_221_residues
MIKNASDRLILISPYLKLNDRIKELLEDKNRLKIDVRIVYGKSELQPAEISWLNELTFVRTSFCKNLHAKCYMNETSCII
TSLNLYEFSQINNNEMGVYISRDDDSEMYRETYDEAQRIIRISEEVRISLQKIDKSKQDNVVDKGANQVESEAVKLTSSK
LASKYKIKTADLMEKLVLLEFVIKDKNGEYHLTEKGILVGGEAKKGRYGDYIMWPESLVIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25604; Mature: 25604

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNASDRLILISPYLKLNDRIKELLEDKNRLKIDVRIVYGKSELQPAEISWLNELTFVR
CCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHH
TSFCKNLHAKCYMNETSCIITSLNLYEFSQINNNEMGVYISRDDDSEMYRETYDEAQRII
HHHHHCCCCEEEECCCEEEEEEECCEEHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
RISEEVRISLQKIDKSKQDNVVDKGANQVESEAVKLTSSKLASKYKIKTADLMEKLVLLE
HHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHH
FVIKDKNGEYHLTEKGILVGGEAKKGRYGDYIMWPESLVIE
HHHCCCCCCEEEECCCEEECCCCCCCCCCCEEECCHHEECC
>Mature Secondary Structure
MIKNASDRLILISPYLKLNDRIKELLEDKNRLKIDVRIVYGKSELQPAEISWLNELTFVR
CCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHH
TSFCKNLHAKCYMNETSCIITSLNLYEFSQINNNEMGVYISRDDDSEMYRETYDEAQRII
HHHHHCCCCEEEECCCEEEEEEECCEEHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
RISEEVRISLQKIDKSKQDNVVDKGANQVESEAVKLTSSKLASKYKIKTADLMEKLVLLE
HHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHH
FVIKDKNGEYHLTEKGILVGGEAKKGRYGDYIMWPESLVIE
HHHCCCCCCEEEECCCEEECCCCCCCCCCCEEECCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA