| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255861
Identifier: 89255861
GI number: 89255861
Start: 426283
End: 427263
Strand: Direct
Name: 89255861
Synonym: FTL_0451
Alternate gene names: NA
Gene position: 426283-427263 (Clockwise)
Preceding gene: 89255859
Following gene: 89255862
Centisome position: 22.48
GC content: 31.29
Gene sequence:
>981_bases ATGAGAAATACTATCAAGATAGTCATTTTATTGAGTCTTGGAATGTTACTACAAAATTGTGCTACTAGTGATGTTGAAAA TGATTTTTCTTATGAGAACTTGACAGATACTATAAGTGGTTCACCATTTAGAAATAGGAAGTATGATTATGCAAGAGTAA AAGTATCAGAAGAGCCAGCGCTAAAAATTCCAACAGGACTAAATGGTGAAAAGATAAAACCAGCATTGAAACTTCCAGAT GATGATAATAATTATGCTATATCACAAGTAAATGAAGCACAGAAACAAATGCTACCACCAAATTACGCAGATAAATTTGA TATGGAGAAAATTATTAGTGATCAAATATCGAAAGTTTCAATCAGTGTTGTCTATGATGATACCGGGTCATTAAAGCTTG TATTTAGGGAGCCTTTATCGATAACTATTAACCTTTTAGATAATTATTTTAAAGAACATCCTGATAGTTATGTAATTACT ACTGAGAAGGATAAGATTTTATCTGGACATTTGATAACAGTAAAAGATACAAAGAAAGATTTAATTTTTGTAATATTAGC TCGAAAAGTAGATGAATTATCAAGTTTAGTCAAAGTTAATGTGGTATTTACTAGTGATGGCAAGACTTTAGCTCCAAATC ATATAGATGAAGGAGTTAGAATTTTAAGTGATATTCGTAAAGACTTAAATAATACTGAGCTTAAAAATGATAATAATATT GAGATTGCAAAACAAGCTGAAGCTAATCTAGCAGCTTCAGAGGCAAATCCTAAAAATGGTAAATCTAGCCTTGGAGGATT GTTAGGTTCAAAGAAAAGTAGTTTTGGCTTTGGCTCATACGATAGAAAAATTGACAATTCATTAGAGCAGCAAAAAACTA ATACAAACCAAGAGCAGCAACAAGATTATACACAAATGACAGCGCCAGCTGATGATAAGGTCTATGATAGTCAAGCACAG CCTCAAGTATTAAATACATAG
Upstream 100 bases:
>100_bases ATTAATTCTACCTATTTTATTATTTAAAGCTTTTATTATATTAGTATAACACTGTGCTATAATGATAAGTCAATTTAATT AGTTATTTATGTTCTAAAAA
Downstream 100 bases:
>100_bases GTGATGATATGTATGATATTTCAGTTTTTATAGGAAGATTTCAGCCTTTTCATAAGGGTCACTTACATAATATAATAATA GCGCTACAAAATAGCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MRNTIKIVILLSLGMLLQNCATSDVENDFSYENLTDTISGSPFRNRKYDYARVKVSEEPALKIPTGLNGEKIKPALKLPD DDNNYAISQVNEAQKQMLPPNYADKFDMEKIISDQISKVSISVVYDDTGSLKLVFREPLSITINLLDNYFKEHPDSYVIT TEKDKILSGHLITVKDTKKDLIFVILARKVDELSSLVKVNVVFTSDGKTLAPNHIDEGVRILSDIRKDLNNTELKNDNNI EIAKQAEANLAASEANPKNGKSSLGGLLGSKKSSFGFGSYDRKIDNSLEQQKTNTNQEQQQDYTQMTAPADDKVYDSQAQ PQVLNT
Sequences:
>Translated_326_residues MRNTIKIVILLSLGMLLQNCATSDVENDFSYENLTDTISGSPFRNRKYDYARVKVSEEPALKIPTGLNGEKIKPALKLPD DDNNYAISQVNEAQKQMLPPNYADKFDMEKIISDQISKVSISVVYDDTGSLKLVFREPLSITINLLDNYFKEHPDSYVIT TEKDKILSGHLITVKDTKKDLIFVILARKVDELSSLVKVNVVFTSDGKTLAPNHIDEGVRILSDIRKDLNNTELKNDNNI EIAKQAEANLAASEANPKNGKSSLGGLLGSKKSSFGFGSYDRKIDNSLEQQKTNTNQEQQQDYTQMTAPADDKVYDSQAQ PQVLNT >Mature_326_residues MRNTIKIVILLSLGMLLQNCATSDVENDFSYENLTDTISGSPFRNRKYDYARVKVSEEPALKIPTGLNGEKIKPALKLPD DDNNYAISQVNEAQKQMLPPNYADKFDMEKIISDQISKVSISVVYDDTGSLKLVFREPLSITINLLDNYFKEHPDSYVIT TEKDKILSGHLITVKDTKKDLIFVILARKVDELSSLVKVNVVFTSDGKTLAPNHIDEGVRILSDIRKDLNNTELKNDNNI EIAKQAEANLAASEANPKNGKSSLGGLLGSKKSSFGFGSYDRKIDNSLEQQKTNTNQEQQQDYTQMTAPADDKVYDSQAQ PQVLNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36385; Mature: 36385
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNTIKIVILLSLGMLLQNCATSDVENDFSYENLTDTISGSPFRNRKYDYARVKVSEEPA CCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCC LKIPTGLNGEKIKPALKLPDDDNNYAISQVNEAQKQMLPPNYADKFDMEKIISDQISKVS EECCCCCCCCCCCCCEECCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCEEE ISVVYDDTGSLKLVFREPLSITINLLDNYFKEHPDSYVITTEKDKILSGHLITVKDTKKD EEEEEECCCCEEEEEECCCEEEHHHHHHHHHHCCCCEEEEECCCCEEECCEEEEECCCCC LIFVILARKVDELSSLVKVNVVFTSDGKTLAPNHIDEGVRILSDIRKDLNNTELKNDNNI EEEHHHHHHHHHHHCEEEEEEEEECCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCE EIAKQAEANLAASEANPKNGKSSLGGLLGSKKSSFGFGSYDRKIDNSLEQQKTNTNQEQQ EEEECCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH QDYTQMTAPADDKVYDSQAQPQVLNT HHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRNTIKIVILLSLGMLLQNCATSDVENDFSYENLTDTISGSPFRNRKYDYARVKVSEEPA CCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCC LKIPTGLNGEKIKPALKLPDDDNNYAISQVNEAQKQMLPPNYADKFDMEKIISDQISKVS EECCCCCCCCCCCCCEECCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCEEE ISVVYDDTGSLKLVFREPLSITINLLDNYFKEHPDSYVITTEKDKILSGHLITVKDTKKD EEEEEECCCCEEEEEECCCEEEHHHHHHHHHHCCCCEEEEECCCCEEECCEEEEECCCCC LIFVILARKVDELSSLVKVNVVFTSDGKTLAPNHIDEGVRILSDIRKDLNNTELKNDNNI EEEHHHHHHHHHHHCEEEEEEEEECCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCE EIAKQAEANLAASEANPKNGKSSLGGLLGSKKSSFGFGSYDRKIDNSLEQQKTNTNQEQQ EEEECCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH QDYTQMTAPADDKVYDSQAQPQVLNT HHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA