| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is isftu2 [C]
Identifier: 89255851
GI number: 89255851
Start: 409289
End: 410188
Strand: Direct
Name: isftu2 [C]
Synonym: FTL_0441
Alternate gene names: 89255851
Gene position: 409289-410188 (Clockwise)
Preceding gene: 89255850
Following gene: 89255852
Centisome position: 21.59
GC content: 32.0
Gene sequence:
>900_bases ATGTTACCATTTTATTATGGTAAATATAGATCAATACATAAGCGTTTTAAAGATTGGTGTGATAAAGATATATTTTCTAG ATTATTTAAATCAGTACAAAACCCTGATTTACAAGAAGTCATGCTTGATTCAACAATAGCAAGAGCACATGCTTGTGCTA CGGGATATGATAAAGATGATAACCAAGCAATTGGTAGATCAGTTGGTGGGATAACCACTAAAATCCATGCTATGACTGAT GCTTTAGGTAATCCAATAGAAATATTGTTGTCAGAAGGTAAAACTCATGATAGTAAAGTAGCTAATTTACTAAAAAATGT ATATAATACAAAAGTTATTGCTGATAGAGCATATCATTCTAATGAAATCAGGCAGCATATTCAAAGTATATCCTCTGAAG CTGTTATCCCTTGTAAATCAAATACTCTAAACCATATACCTTTTGATAGTCATGTATATAAAGAAAGACATTTGATAGAG AATTTCTTTTCTAAAATTAAGCATTTTAGAAGAGTATTCTCTAGATTTGATAAAACCATTTCAGCATATATAGGAATGAT TAAATTAGCTTGTACTTTTATTTGGCTACTGAGAAACTATTTTTGTGCACAGAACCTAGTTACTAAATCTAAGAATACTG TAGGTATTAGAGTTAGTGAGCATTACGTGCCAAGAGCAATATCAGCTGAAATTGGCGAACCATTAGTTATCAGTAGTTTT ATAGTACCTGGTCATCAGCATGTGGTTACAGACTGTGATGAGGTTGATAGCCAGATAATGAATTATCTAGATGCGGTAGT TGAGTCAGACTATTGTGGTTATGATCTAACAACTGTTGTCGAGCTACTAGAATTACCATATCAAATTTTAAGACAAGGAG CAGGTGAGATAGATCTATAG
Upstream 100 bases:
>100_bases TTTAAAATCATAAAAAGGTATACATACCAATGATGAAGCCAAATTAAGATTATTTATTGAAGCTGTATTTTATGTGTTAC GTACAGGCTGTCAATGGAGG
Downstream 100 bases:
>100_bases CTATTCAAATGTCTAGTAAAATCGAAAATAGAAATAAGTATAATCAATTATGAATGGTTACAAAACAACATCTGAAAATA TAGAATTTGAAATTGCGCCA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDDNQAIGRSVGGITTKIHAMTD ALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHSNEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIE NFFSKIKHFRRVFSRFDKTISAYIGMIKLACTFIWLLRNYFCAQNLVTKSKNTVGIRVSEHYVPRAISAEIGEPLVISSF IVPGHQHVVTDCDEVDSQIMNYLDAVVESDYCGYDLTTVVELLELPYQILRQGAGEIDL
Sequences:
>Translated_299_residues MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDDNQAIGRSVGGITTKIHAMTD ALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHSNEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIE NFFSKIKHFRRVFSRFDKTISAYIGMIKLACTFIWLLRNYFCAQNLVTKSKNTVGIRVSEHYVPRAISAEIGEPLVISSF IVPGHQHVVTDCDEVDSQIMNYLDAVVESDYCGYDLTTVVELLELPYQILRQGAGEIDL >Mature_299_residues MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDDNQAIGRSVGGITTKIHAMTD ALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHSNEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIE NFFSKIKHFRRVFSRFDKTISAYIGMIKLACTFIWLLRNYFCAQNLVTKSKNTVGIRVSEHYVPRAISAEIGEPLVISSF IVPGHQHVVTDCDEVDSQIMNYLDAVVESDYCGYDLTTVVELLELPYQILRQGAGEIDL
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 34068; Mature: 34068
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS51163 YRDC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC NQAIGRSVGGITTKIHAMTDALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHS CHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIENFFSKIKHFRRVFSRFDKTI HHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAYIGMIKLACTFIWLLRNYFCAQNLVTKSKNTVGIRVSEHYVPRAISAEIGEPLVISSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCCHHHHHH IVPGHQHVVTDCDEVDSQIMNYLDAVVESDYCGYDLTTVVELLELPYQILRQGAGEIDL HCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC NQAIGRSVGGITTKIHAMTDALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHS CHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIENFFSKIKHFRRVFSRFDKTI HHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAYIGMIKLACTFIWLLRNYFCAQNLVTKSKNTVGIRVSEHYVPRAISAEIGEPLVISSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCCHHHHHH IVPGHQHVVTDCDEVDSQIMNYLDAVVESDYCGYDLTTVVELLELPYQILRQGAGEIDL HCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8126444 [H]