| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255849
Identifier: 89255849
GI number: 89255849
Start: 406452
End: 408107
Strand: Direct
Name: 89255849
Synonym: FTL_0439
Alternate gene names: NA
Gene position: 406452-408107 (Clockwise)
Preceding gene: 89255848
Following gene: 89255850
Centisome position: 21.44
GC content: 37.98
Gene sequence:
>1656_bases GTGGTGCGTAAATTTAAAAAAACCTGTTTGATAGTTAGTAGTTTATTGGCTTGTAGTGGTTTAGCTTATTCTGAAGATTC TCCTCAAGTTGTTTCACAAGGGGGGCCTCTTGGAGCTACTAGTATTGGTGATCAAAACCTTGGACAGCCAGATCCAAATG CTAGTGGAGCCTCTTCAACAACACAGACTACCGGTTCAAATCTAAATGATAGGGAACTTTTGCTAAAATTACAGCAGCAG GTACAGCAACTTCAGGGACAATTACAACAGCTAAAAGCACAGGGTAATGGTGGTGGATTACAGAATACCTCTAATGGTAG TTCGCAGTTTACTACTTACAGCTCAAAAGTTGATGGTAATAAAAATCCTCGTACGCTTGGAGGCAATGGTGAGAGTAAAG ATCTGAGTCAGGCTTTGATTGGTGGTCAAACGTCGTCAGATATTATGGGGAATGTTAATGCTAGTAACTCTATCATTAAT TTAGCTTCTGAGCCATTAGGAGGCGTCTTTAACCAAAAAGGCGGTATCGACGTTGGTGGAGCTCCGGCGATTACAACACA AGGTCAAGTTACCTACTTAGGTTCGTACTCTGGTAACAACAGTATTCCAATTGGTCAGATTTCTTCTAACCTTTTTGCTT CTACATTGTTGGGTCAAAGAGAGAAGTTTGATGACTACTCTGTATTCTTTGGTGGCTTTATAGAAGCAGATGCCCAAGCT TGGTTTGGTAGTGCTGTTACTAAGGCGCAAAGTGCTGGCCAGTTATATAGCAATGGCCAAAATATATATTTAACATCAGC TAATTTATATTTCTTATCAAATCTTGGTCATTATGTAACAGCTCAGTTTGATTTTGATACTAATGAGTCAGGAAGTTTTA GTTTAGGTAATGCTTTTGTAATTTTTGGAAATCTTGATACAACACCAGTATTTGTGTCAGTCGGTAAATATAGACCTTCT GTTGGCTCGTTTGGAGGTGGTGGGCCCTGGACAAGTGGTATCACTGCGAATATGTTTAGACCACTTAGAGTTACCAATGC AGCGATAAACTATCGTGGTGATACCTCAAATGCTAACTTTACAGTGTTTGATGCAAAAAATCATGCGACTTTTTCAGTAG CCTATTTTGATGCTGTGAGTATTCCAAATATAGCTCAAGTTGGTTTTAACTTAGGTTATATGCATGATATTCGTGGTGCT AATAACAGATTTAATTTTATTGATAAACGGGTTGGAGAATTTAATATCGATACCGCTATAAGCTTTGAGAGTATTCCTTT TTTACCAGGGAATTTAAATGTTGGTGCTGGCTGGGCAACTACTACAACCCAAAGTACACAATTTAATGGTCGTAGTAATG CATTTGCAGGAGCTTTTACAGTACAAGCAGCATATACATTTAAATTATTTGGTAGTGGTCAGAATATTAACGCTAGTTAT GGTCATTCTTATAATGCTGATAATATTCCCATGCCATTATCTGCTGGAGGGAGCTTTTTTCTAGCAGCTTCAGGGATTAA AGATCAAATTTTAGTATCGACACAAAGATCATTTTTTGACGATAATGTTCTTATCGGTCCTGAGTATTCATGGCAAAGCT TATACAATGGACAACGCATGAATACACTTACATTAGATCTTTCAGTTTATATCTAG
Upstream 100 bases:
>100_bases TCTTAAAGTATGAAATTTATTGAAACTAAGCGCGACTTTGTGATAAACTCAACAAGATTTTCTTTGGTTTGCCAATTTTT TATTAGAGGGAAGTTTTACT
Downstream 100 bases:
>100_bases ACATATTTAGAGTCTATTTTAGGAAGTAACTAGTTAAGAAGTATTAGTAACAGTAACATAATTTATTTTATAGTTAATCC GAAAGATATTTGTAGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MVRKFKKTCLIVSSLLACSGLAYSEDSPQVVSQGGPLGATSIGDQNLGQPDPNASGASSTTQTTGSNLNDRELLLKLQQQ VQQLQGQLQQLKAQGNGGGLQNTSNGSSQFTTYSSKVDGNKNPRTLGGNGESKDLSQALIGGQTSSDIMGNVNASNSIIN LASEPLGGVFNQKGGIDVGGAPAITTQGQVTYLGSYSGNNSIPIGQISSNLFASTLLGQREKFDDYSVFFGGFIEADAQA WFGSAVTKAQSAGQLYSNGQNIYLTSANLYFLSNLGHYVTAQFDFDTNESGSFSLGNAFVIFGNLDTTPVFVSVGKYRPS VGSFGGGGPWTSGITANMFRPLRVTNAAINYRGDTSNANFTVFDAKNHATFSVAYFDAVSIPNIAQVGFNLGYMHDIRGA NNRFNFIDKRVGEFNIDTAISFESIPFLPGNLNVGAGWATTTTQSTQFNGRSNAFAGAFTVQAAYTFKLFGSGQNINASY GHSYNADNIPMPLSAGGSFFLAASGIKDQILVSTQRSFFDDNVLIGPEYSWQSLYNGQRMNTLTLDLSVYI
Sequences:
>Translated_551_residues MVRKFKKTCLIVSSLLACSGLAYSEDSPQVVSQGGPLGATSIGDQNLGQPDPNASGASSTTQTTGSNLNDRELLLKLQQQ VQQLQGQLQQLKAQGNGGGLQNTSNGSSQFTTYSSKVDGNKNPRTLGGNGESKDLSQALIGGQTSSDIMGNVNASNSIIN LASEPLGGVFNQKGGIDVGGAPAITTQGQVTYLGSYSGNNSIPIGQISSNLFASTLLGQREKFDDYSVFFGGFIEADAQA WFGSAVTKAQSAGQLYSNGQNIYLTSANLYFLSNLGHYVTAQFDFDTNESGSFSLGNAFVIFGNLDTTPVFVSVGKYRPS VGSFGGGGPWTSGITANMFRPLRVTNAAINYRGDTSNANFTVFDAKNHATFSVAYFDAVSIPNIAQVGFNLGYMHDIRGA NNRFNFIDKRVGEFNIDTAISFESIPFLPGNLNVGAGWATTTTQSTQFNGRSNAFAGAFTVQAAYTFKLFGSGQNINASY GHSYNADNIPMPLSAGGSFFLAASGIKDQILVSTQRSFFDDNVLIGPEYSWQSLYNGQRMNTLTLDLSVYI >Mature_551_residues MVRKFKKTCLIVSSLLACSGLAYSEDSPQVVSQGGPLGATSIGDQNLGQPDPNASGASSTTQTTGSNLNDRELLLKLQQQ VQQLQGQLQQLKAQGNGGGLQNTSNGSSQFTTYSSKVDGNKNPRTLGGNGESKDLSQALIGGQTSSDIMGNVNASNSIIN LASEPLGGVFNQKGGIDVGGAPAITTQGQVTYLGSYSGNNSIPIGQISSNLFASTLLGQREKFDDYSVFFGGFIEADAQA WFGSAVTKAQSAGQLYSNGQNIYLTSANLYFLSNLGHYVTAQFDFDTNESGSFSLGNAFVIFGNLDTTPVFVSVGKYRPS VGSFGGGGPWTSGITANMFRPLRVTNAAINYRGDTSNANFTVFDAKNHATFSVAYFDAVSIPNIAQVGFNLGYMHDIRGA NNRFNFIDKRVGEFNIDTAISFESIPFLPGNLNVGAGWATTTTQSTQFNGRSNAFAGAFTVQAAYTFKLFGSGQNINASY GHSYNADNIPMPLSAGGSFFLAASGIKDQILVSTQRSFFDDNVLIGPEYSWQSLYNGQRMNTLTLDLSVYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58446; Mature: 58446
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRKFKKTCLIVSSLLACSGLAYSEDSPQVVSQGGPLGATSIGDQNLGQPDPNASGASST CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TQTTGSNLNDRELLLKLQQQVQQLQGQLQQLKAQGNGGGLQNTSNGSSQFTTYSSKVDGN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCC KNPRTLGGNGESKDLSQALIGGQTSSDIMGNVNASNSIINLASEPLGGVFNQKGGIDVGG CCCCEECCCCCCHHHHHHHHCCCCCCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCC APAITTQGQVTYLGSYSGNNSIPIGQISSNLFASTLLGQREKFDDYSVFFGGFIEADAQA CCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHCCCCEEEEECCEEECCHHH WFGSAVTKAQSAGQLYSNGQNIYLTSANLYFLSNLGHYVTAQFDFDTNESGSFSLGNAFV HHHHHHHHHHHCCHHHHCCCEEEEEECCEEEEECCCCEEEEEEECCCCCCCCEECCCEEE IFGNLDTTPVFVSVGKYRPSVGSFGGGGPWTSGITANMFRPLRVTNAAINYRGDTSNANF EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEEEEEECCCCCCCCE TVFDAKNHATFSVAYFDAVSIPNIAQVGFNLGYMHDIRGANNRFNFIDKRVGEFNIDTAI EEEECCCCCEEEEEEEECCCCCCHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCCEEE SFESIPFLPGNLNVGAGWATTTTQSTQFNGRSNAFAGAFTVQAAYTFKLFGSGQNINASY EECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCC GHSYNADNIPMPLSAGGSFFLAASGIKDQILVSTQRSFFDDNVLIGPEYSWQSLYNGQRM CCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEHHHHCCCCEEECCCCCHHHHCCCCCE NTLTLDLSVYI EEEEEEEEEEC >Mature Secondary Structure MVRKFKKTCLIVSSLLACSGLAYSEDSPQVVSQGGPLGATSIGDQNLGQPDPNASGASST CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TQTTGSNLNDRELLLKLQQQVQQLQGQLQQLKAQGNGGGLQNTSNGSSQFTTYSSKVDGN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCC KNPRTLGGNGESKDLSQALIGGQTSSDIMGNVNASNSIINLASEPLGGVFNQKGGIDVGG CCCCEECCCCCCHHHHHHHHCCCCCCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCC APAITTQGQVTYLGSYSGNNSIPIGQISSNLFASTLLGQREKFDDYSVFFGGFIEADAQA CCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHCCCCEEEEECCEEECCHHH WFGSAVTKAQSAGQLYSNGQNIYLTSANLYFLSNLGHYVTAQFDFDTNESGSFSLGNAFV HHHHHHHHHHHCCHHHHCCCEEEEEECCEEEEECCCCEEEEEEECCCCCCCCEECCCEEE IFGNLDTTPVFVSVGKYRPSVGSFGGGGPWTSGITANMFRPLRVTNAAINYRGDTSNANF EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEEEEEECCCCCCCCE TVFDAKNHATFSVAYFDAVSIPNIAQVGFNLGYMHDIRGANNRFNFIDKRVGEFNIDTAI EEEECCCCCEEEEEEEECCCCCCHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCCEEE SFESIPFLPGNLNVGAGWATTTTQSTQFNGRSNAFAGAFTVQAAYTFKLFGSGQNINASY EECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCC GHSYNADNIPMPLSAGGSFFLAASGIKDQILVSTQRSFFDDNVLIGPEYSWQSLYNGQRM CCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEHHHHCCCCEEECCCCCHHHHCCCCCE NTLTLDLSVYI EEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA