| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255835
Identifier: 89255835
GI number: 89255835
Start: 391093
End: 392445
Strand: Direct
Name: 89255835
Synonym: FTL_0425
Alternate gene names: NA
Gene position: 391093-392445 (Clockwise)
Preceding gene: 89255834
Following gene: 89255837
Centisome position: 20.63
GC content: 30.97
Gene sequence:
>1353_bases ATGCCTTTTATGCATTATACTGTATTGAATTTAGTCAAAGTAACATCAGGAAGTACTGTTAGCTATTTTAATGATACATT GGCAGCTAATATTTACCTATTTATAGATCGATACTATATCTTTTATACAGTACTTGGTGTTGCTAGTGTGGCTATTTTTC TAAATAAAAGAATATTTTCTGAGGTGATCGAATTATTTAGTAGTTTTAATTTGTCAATTAGATACGCTATTGCTTTATTT TTTATATTTGGGGTTATATCATCAGTTTTTGCGATATCTCCTTCTATAGCTTTTAAAGGCGTCAGCGTAACATTTTTACA ATTTTTTTGTATTTTATTTATAGCTGTTTACATTAGAGATAATTCTAAAGCAGTACGATTTTTTTATACAATTATTTTGT TATCACTAATATTTTTTGGGGGATCATTATTTTTACAGTTATCTTTAGCTAATTACTCAGTATATGGATCGTATATTGCT GGTAATATCCAAAAAGTTTTGCTGTATATGTATAATTGTTTAAATCCACGATTTTTGGATAATTATTTTAGCTGGTTTAT GCCGTTGCTACTTTTGCCTTGGTTTGTTGATCTAAGGCCTATATATAAGCTTGGCTCATTTATTGCTTTGATTTTAGCAT GGTTTATCTTGATCAATCATGGTTTTAGAACAATATTTGCAGAGTATATCATTATATTACCATTGCTTTATATCTTTGCG CGAAGATATTTTAAAATAGCATTTGTAGTGCTTGTTTTGGCTTTAGTTTGTGCTGGCTTACTAGAGTTATTCTATAATTA TTTTATAGCTGTAGTAGATCATTCGAATGTTAAATCATCAGCAGATCTTGTTAGAGGTGGTTTTAGTGGTAGAATTCCAT TATGGAAAGAAGCTTTTTGGGTTGGGGTTGAGTATCCTTTAACTGGAGTGGGGCAATGGAATTATCTAGCGATTACTAAA CGCCCAGATGGTTATCCGCATAATCTATTGCTGGAAATATGGTCACAGTGGGGTATTCCTGCATTTATAGCTGCAGCTGT AGTTATTATTACAACTGTTAGAAACTTATACAAAAAACGCCTTGAGATATGCTTAAACCCTTATCAATGTATATTTGTAA TGATGTTAACAGCAGGGATGATTGATGGGATGCTAAATGCGATGTTTAAAACATCCTTAGGTTTATTTGGTTGTGTTTTT GTATTTGGTTTTTGCTTATCTATTTTTGTAAAACAGCCTCAACAAGATACTAGTGTATCAGCTACAAGCTATGCGATAGT TGGATTGTCTATATTTGCGAGTATATTTTGTATTGCAATTTTACCACTTATATTTCCACCTTTGTGGATATAA
Upstream 100 bases:
>100_bases CAACATATTTGTGATAGAAGTGATAAATTACCTAAAAAAAATATCTTACGCTGATTATATTTTTTACTTTTTAACTTTAG CGATTTTCTTTGTGTTTTTA
Downstream 100 bases:
>100_bases TTTATTTTAAACATACAGAATACTCTATAAATCTAAGCTTGAAAGGATATAATTTATTTAGTTTCAAATGCTACAGCATA GTCACACTCGCTATTAGGGC
Product: Type IV pili glycosylation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MPFMHYTVLNLVKVTSGSTVSYFNDTLAANIYLFIDRYYIFYTVLGVASVAIFLNKRIFSEVIELFSSFNLSIRYAIALF FIFGVISSVFAISPSIAFKGVSVTFLQFFCILFIAVYIRDNSKAVRFFYTIILLSLIFFGGSLFLQLSLANYSVYGSYIA GNIQKVLLYMYNCLNPRFLDNYFSWFMPLLLLPWFVDLRPIYKLGSFIALILAWFILINHGFRTIFAEYIIILPLLYIFA RRYFKIAFVVLVLALVCAGLLELFYNYFIAVVDHSNVKSSADLVRGGFSGRIPLWKEAFWVGVEYPLTGVGQWNYLAITK RPDGYPHNLLLEIWSQWGIPAFIAAAVVIITTVRNLYKKRLEICLNPYQCIFVMMLTAGMIDGMLNAMFKTSLGLFGCVF VFGFCLSIFVKQPQQDTSVSATSYAIVGLSIFASIFCIAILPLIFPPLWI
Sequences:
>Translated_450_residues MPFMHYTVLNLVKVTSGSTVSYFNDTLAANIYLFIDRYYIFYTVLGVASVAIFLNKRIFSEVIELFSSFNLSIRYAIALF FIFGVISSVFAISPSIAFKGVSVTFLQFFCILFIAVYIRDNSKAVRFFYTIILLSLIFFGGSLFLQLSLANYSVYGSYIA GNIQKVLLYMYNCLNPRFLDNYFSWFMPLLLLPWFVDLRPIYKLGSFIALILAWFILINHGFRTIFAEYIIILPLLYIFA RRYFKIAFVVLVLALVCAGLLELFYNYFIAVVDHSNVKSSADLVRGGFSGRIPLWKEAFWVGVEYPLTGVGQWNYLAITK RPDGYPHNLLLEIWSQWGIPAFIAAAVVIITTVRNLYKKRLEICLNPYQCIFVMMLTAGMIDGMLNAMFKTSLGLFGCVF VFGFCLSIFVKQPQQDTSVSATSYAIVGLSIFASIFCIAILPLIFPPLWI >Mature_449_residues PFMHYTVLNLVKVTSGSTVSYFNDTLAANIYLFIDRYYIFYTVLGVASVAIFLNKRIFSEVIELFSSFNLSIRYAIALFF IFGVISSVFAISPSIAFKGVSVTFLQFFCILFIAVYIRDNSKAVRFFYTIILLSLIFFGGSLFLQLSLANYSVYGSYIAG NIQKVLLYMYNCLNPRFLDNYFSWFMPLLLLPWFVDLRPIYKLGSFIALILAWFILINHGFRTIFAEYIIILPLLYIFAR RYFKIAFVVLVLALVCAGLLELFYNYFIAVVDHSNVKSSADLVRGGFSGRIPLWKEAFWVGVEYPLTGVGQWNYLAITKR PDGYPHNLLLEIWSQWGIPAFIAAAVVIITTVRNLYKKRLEICLNPYQCIFVMMLTAGMIDGMLNAMFKTSLGLFGCVFV FGFCLSIFVKQPQQDTSVSATSYAIVGLSIFASIFCIAILPLIFPPLWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51278; Mature: 51147
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFMHYTVLNLVKVTSGSTVSYFNDTLAANIYLFIDRYYIFYTVLGVASVAIFLNKRIFS CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVIELFSSFNLSIRYAIALFFIFGVISSVFAISPSIAFKGVSVTFLQFFCILFIAVYIRD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHCC NSKAVRFFYTIILLSLIFFGGSLFLQLSLANYSVYGSYIAGNIQKVLLYMYNCLNPRFLD CCHHHHHHHHHHHHHHHHHCCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH NYFSWFMPLLLLPWFVDLRPIYKLGSFIALILAWFILINHGFRTIFAEYIIILPLLYIFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH RRYFKIAFVVLVLALVCAGLLELFYNYFIAVVDHSNVKSSADLVRGGFSGRIPLWKEAFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCCHHHHHE VGVEYPLTGVGQWNYLAITKRPDGYPHNLLLEIWSQWGIPAFIAAAVVIITTVRNLYKKR EEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LEICLNPYQCIFVMMLTAGMIDGMLNAMFKTSLGLFGCVFVFGFCLSIFVKQPQQDTSVS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ATSYAIVGLSIFASIFCIAILPLIFPPLWI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PFMHYTVLNLVKVTSGSTVSYFNDTLAANIYLFIDRYYIFYTVLGVASVAIFLNKRIFS CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVIELFSSFNLSIRYAIALFFIFGVISSVFAISPSIAFKGVSVTFLQFFCILFIAVYIRD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHCC NSKAVRFFYTIILLSLIFFGGSLFLQLSLANYSVYGSYIAGNIQKVLLYMYNCLNPRFLD CCHHHHHHHHHHHHHHHHHCCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH NYFSWFMPLLLLPWFVDLRPIYKLGSFIALILAWFILINHGFRTIFAEYIIILPLLYIFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH RRYFKIAFVVLVLALVCAGLLELFYNYFIAVVDHSNVKSSADLVRGGFSGRIPLWKEAFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCCHHHHHE VGVEYPLTGVGQWNYLAITKRPDGYPHNLLLEIWSQWGIPAFIAAAVVIITTVRNLYKKR EEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LEICLNPYQCIFVMMLTAGMIDGMLNAMFKTSLGLFGCVFVFGFCLSIFVKQPQQDTSVS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ATSYAIVGLSIFASIFCIAILPLIFPPLWI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA