Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89255833

Identifier: 89255833

GI number: 89255833

Start: 389927

End: 390430

Strand: Direct

Name: 89255833

Synonym: FTL_0423

Alternate gene names: NA

Gene position: 389927-390430 (Clockwise)

Preceding gene: 89255832

Following gene: 89255834

Centisome position: 20.57

GC content: 32.14

Gene sequence:

>504_bases
ATGAAAAAGAACATTTCCACTTATTTGTTAATAATAGTTACTATTATTAGCTTTATGTTAGCTAGTTGTGCATCTAAAAG
TGAAAAGTTAAATGAGCTAGAGCAGAGCCAGCAACAGCTACAAAAAGAGATGACTACTATTGAGAAAAAAGCTGATGAGG
CTAAGCAAAGAGCCGATAAGTATGAAAAGCTTACTGGGAAATATAAAAACCTACTAGATCAGAAGCAACAAGAGCTTAAT
CAGCTCCAAGCTGCATATGCAAAAATAAGTAATAAAGATGAAGCCGCAGCTATAGCAGCTAAAAAAGATATTCAAGAAAA
GCTTATAAAGGCTGCTCAAGATTCGGTACATTTACAAAAGAGATTAAAACGTTATACTAAAAAGGCGGATGTTTATAAAC
AAAAGTCTCAACAATTAGATGAGCAAGCAAAACAAACTCAACAAAGTGTTGATAAAACAATCCAAGAAATCCAACAAATA
AAAAAAGAGATTGATATTAAGTAG

Upstream 100 bases:

>100_bases
GTATAAATATTTTTTATTATTGTGATACTAATATTCTTTACTTAGATACTCTAGCTGTTAAAATATAAGCTTATAACATT
ACATATATAGATTTAGTTTT

Downstream 100 bases:

>100_bases
TGAAAAACTTAATGAAATAACAGGTAATACTAATGAAAAAAATTCTAATCTTTACTCTAATGACGGCAACTTTAGCAGGC
TGTAGTAAGTATAATGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKKNISTYLLIIVTIISFMLASCASKSEKLNELEQSQQQLQKEMTTIEKKADEAKQRADKYEKLTGKYKNLLDQKQQELN
QLQAAYAKISNKDEAAAIAAKKDIQEKLIKAAQDSVHLQKRLKRYTKKADVYKQKSQQLDEQAKQTQQSVDKTIQEIQQI
KKEIDIK

Sequences:

>Translated_167_residues
MKKNISTYLLIIVTIISFMLASCASKSEKLNELEQSQQQLQKEMTTIEKKADEAKQRADKYEKLTGKYKNLLDQKQQELN
QLQAAYAKISNKDEAAAIAAKKDIQEKLIKAAQDSVHLQKRLKRYTKKADVYKQKSQQLDEQAKQTQQSVDKTIQEIQQI
KKEIDIK
>Mature_167_residues
MKKNISTYLLIIVTIISFMLASCASKSEKLNELEQSQQQLQKEMTTIEKKADEAKQRADKYEKLTGKYKNLLDQKQQELN
QLQAAYAKISNKDEAAAIAAKKDIQEKLIKAAQDSVHLQKRLKRYTKKADVYKQKSQQLDEQAKQTQQSVDKTIQEIQQI
KKEIDIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19303; Mature: 19303

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNISTYLLIIVTIISFMLASCASKSEKLNELEQSQQQLQKEMTTIEKKADEAKQRADK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEKLTGKYKNLLDQKQQELNQLQAAYAKISNKDEAAAIAAKKDIQEKLIKAAQDSVHLQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLKRYTKKADVYKQKSQQLDEQAKQTQQSVDKTIQEIQQIKKEIDIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKNISTYLLIIVTIISFMLASCASKSEKLNELEQSQQQLQKEMTTIEKKADEAKQRADK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEKLTGKYKNLLDQKQQELNQLQAAYAKISNKDEAAAIAAKKDIQEKLIKAAQDSVHLQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLKRYTKKADVYKQKSQQLDEQAKQTQQSVDKTIQEIQQIKKEIDIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA