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The map label for this gene is recN [H]

Identifier: 89255800

GI number: 89255800

Start: 358020

End: 359669

Strand: Direct

Name: recN [H]

Synonym: FTL_0389

Alternate gene names: 89255800

Gene position: 358020-359669 (Clockwise)

Preceding gene: 89255799

Following gene: 89255804

Centisome position: 18.88

GC content: 35.88

Gene sequence:

>1650_bases
ATGCTACTACATTTATCAATCAAAAACTTTGCGATTATAAAATCTACTGAAATTGATTTTAGAGAGGGTATGACTGTACT
AACAGGTGAGACTGGCGCGGGTAAGTCAATTCTACTTGATGCGCTTAGTTTTGTACTTGGTGCAAGGTTAGAAAAGACAT
TTCTACAAGATGATAAGCTGACAGAAGTTTCGGCTACTTTTTCTATCAAAGATAATCACAAGGCAAAACGTCTTTTAGAT
GAGCTTTTTATTGATTATGAAAATGATGAATGTACTTTTAGAAGGGTGGTTAATAAATCTAAACAGAGTCGCCTATTTAT
AAATGGTAGTGTTGCCAAAGCTGCAGATGTCAAAAAAGTTTCAGATAAGCTGATAAATATCTATAGTCAAAATTCGCATC
AAGATTTACTTGATCCTAAATCACAGTTAAGCTTGCTAGATAGTTTTGCAAATAATGATGAATTGCTAAAGAAAGTTACG
GATTCATTTTATCAGTTACAAAAAATAAATTCTGAAATAGCACAATTGCAAGAGTATATTGATACACAAAATAGTCAGCG
AGAATTACTTGAGTATAAGCTAGATGAACTAGTTGCTCTAGAGCTCGGTGAAAATGAATTTGAGCAGTTAGCGCAACGCC
AAAAGTGTTTATCAAGTGTTGATGATATCGGCTATAGTCTTAATCATATTACAAGTCTAATATATGATGATGAGATAAAT
ATAATCGCGATGCTTAGTGAGCTTGAGAAAGAAGTAGCAAAGCTAGATGAAGGAGCATTTAGAAACCTCCAAGAGCTAAT
ATCCCAAACTAAAGTGTACGCTCAAGAAAGTTATGCTGAAGCACAAAACCAACTAGAATCACTAGAGCAAGATCCAGAGG
AGTTGGCAAAAGTAGAGCAACGTATGAGCCAAATATATGATCTTGCACGTAGGCATAAGATTGAGCCTAACTATATGTAT
CAGTATATCCAAGAGTTGCAGACAGAGTTAGATAATTTTACTCAAGATAGTACGCGACTATCACAGTTAAATGAGCAAAA
ACAAAACTTACAACAGCAATACAGTGAATATGCAAATAAGCTTAGTCAAGCACGTAAACAAGCAGCTAAAGAATTCTCAA
AACAAGTTGAGAAAAATATTCGTTCTCTTAATATCCCCAAAGGTAGTTTTGAGGCACAGATTTTGCCAGCCCAAAGCAAA
ACATCTAAAGGTGTAGATGAGTGCCAATTTATGATTAACTTCAACCTTGGTGAGCAACTAGCACCTGTCAAAAAGGTTGC
ATCAGGTGGTGAGCTAAGTAGGATTGGCTTATCGATACAAGCAGTATCAGCAGCAAAAAGATCCTATCCAACTTTAGTTT
TTGATGAGGTTGATGTAGGTATTTCTGGAGCTACTGCGGAGATAGTTGGCAAACTACTCAAAAAACTATCAGAAAGACTA
CAAGTTCTGTGTATAACCCATCAGCCACAAGTTGCTGCTCAAGGTCAGACACATCTACATGTATCTAAGAAATATCTCAA
AGATACTACAGAATCAAAGATTATAGAACTAAATCACCAGCAGCGTATCGAAGAGATAGCTAAGATAGTCGGCGGTGTAG
ATATCTCAGAAAATACGTTATCTCATGCTAGAGAGCTTTTGGGTTTGTGA

Upstream 100 bases:

>100_bases
TATGTTAGTTTTTAAATATAAAATCGACGGTTTATTACTTGTATAAGTAGACAAGAGCATATATATTAAACTAGTTGTAA
TATTAATCATCTAAAGATCT

Downstream 100 bases:

>100_bases
TTGAATTATGTTGTATGGGCTAACCAATGTGTTAGCCCTTGTGGTATTGGTGCTAAAGAAGGGTTGACACATGGTTCAAC
CCCTACAAAAACTGTTGTCA

Product: DNA repair protein recN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MLLHLSIKNFAIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDDKLTEVSATFSIKDNHKAKRLLD
ELFIDYENDECTFRRVVNKSKQSRLFINGSVAKAADVKKVSDKLINIYSQNSHQDLLDPKSQLSLLDSFANNDELLKKVT
DSFYQLQKINSEIAQLQEYIDTQNSQRELLEYKLDELVALELGENEFEQLAQRQKCLSSVDDIGYSLNHITSLIYDDEIN
IIAMLSELEKEVAKLDEGAFRNLQELISQTKVYAQESYAEAQNQLESLEQDPEELAKVEQRMSQIYDLARRHKIEPNYMY
QYIQELQTELDNFTQDSTRLSQLNEQKQNLQQQYSEYANKLSQARKQAAKEFSKQVEKNIRSLNIPKGSFEAQILPAQSK
TSKGVDECQFMINFNLGEQLAPVKKVASGGELSRIGLSIQAVSAAKRSYPTLVFDEVDVGISGATAEIVGKLLKKLSERL
QVLCITHQPQVAAQGQTHLHVSKKYLKDTTESKIIELNHQQRIEEIAKIVGGVDISENTLSHARELLGL

Sequences:

>Translated_549_residues
MLLHLSIKNFAIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDDKLTEVSATFSIKDNHKAKRLLD
ELFIDYENDECTFRRVVNKSKQSRLFINGSVAKAADVKKVSDKLINIYSQNSHQDLLDPKSQLSLLDSFANNDELLKKVT
DSFYQLQKINSEIAQLQEYIDTQNSQRELLEYKLDELVALELGENEFEQLAQRQKCLSSVDDIGYSLNHITSLIYDDEIN
IIAMLSELEKEVAKLDEGAFRNLQELISQTKVYAQESYAEAQNQLESLEQDPEELAKVEQRMSQIYDLARRHKIEPNYMY
QYIQELQTELDNFTQDSTRLSQLNEQKQNLQQQYSEYANKLSQARKQAAKEFSKQVEKNIRSLNIPKGSFEAQILPAQSK
TSKGVDECQFMINFNLGEQLAPVKKVASGGELSRIGLSIQAVSAAKRSYPTLVFDEVDVGISGATAEIVGKLLKKLSERL
QVLCITHQPQVAAQGQTHLHVSKKYLKDTTESKIIELNHQQRIEEIAKIVGGVDISENTLSHARELLGL
>Mature_549_residues
MLLHLSIKNFAIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDDKLTEVSATFSIKDNHKAKRLLD
ELFIDYENDECTFRRVVNKSKQSRLFINGSVAKAADVKKVSDKLINIYSQNSHQDLLDPKSQLSLLDSFANNDELLKKVT
DSFYQLQKINSEIAQLQEYIDTQNSQRELLEYKLDELVALELGENEFEQLAQRQKCLSSVDDIGYSLNHITSLIYDDEIN
IIAMLSELEKEVAKLDEGAFRNLQELISQTKVYAQESYAEAQNQLESLEQDPEELAKVEQRMSQIYDLARRHKIEPNYMY
QYIQELQTELDNFTQDSTRLSQLNEQKQNLQQQYSEYANKLSQARKQAAKEFSKQVEKNIRSLNIPKGSFEAQILPAQSK
TSKGVDECQFMINFNLGEQLAPVKKVASGGELSRIGLSIQAVSAAKRSYPTLVFDEVDVGISGATAEIVGKLLKKLSERL
QVLCITHQPQVAAQGQTHLHVSKKYLKDTTESKIIELNHQQRIEEIAKIVGGVDISENTLSHARELLGL

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=555, Percent_Identity=36.9369369369369, Blast_Score=347, Evalue=1e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62195; Mature: 62195

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHLSIKNFAIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDDKL
CEEEEEECCEEEEEECCCHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
TEVSATFSIKDNHKAKRLLDELFIDYENDECTFRRVVNKSKQSRLFINGSVAKAADVKKV
CHHEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
SDKLINIYSQNSHQDLLDPKSQLSLLDSFANNDELLKKVTDSFYQLQKINSEIAQLQEYI
HHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTQNSQRELLEYKLDELVALELGENEFEQLAQRQKCLSSVDDIGYSLNHITSLIYDDEIN
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCH
IIAMLSELEKEVAKLDEGAFRNLQELISQTKVYAQESYAEAQNQLESLEQDPEELAKVEQ
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RMSQIYDLARRHKIEPNYMYQYIQELQTELDNFTQDSTRLSQLNEQKQNLQQQYSEYANK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSQARKQAAKEFSKQVEKNIRSLNIPKGSFEAQILPAQSKTSKGVDECQFMINFNLGEQL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHEEEEEEECCCHHH
APVKKVASGGELSRIGLSIQAVSAAKRSYPTLVFDEVDVGISGATAEIVGKLLKKLSERL
HHHHHHHCCCCCHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
QVLCITHQPQVAAQGQTHLHVSKKYLKDTTESKIIELNHQQRIEEIAKIVGGVDISENTL
HEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHEECCHHHHHHHHHHHHCCCCCCHHHH
SHARELLGL
HHHHHHHCC
>Mature Secondary Structure
MLLHLSIKNFAIIKSTEIDFREGMTVLTGETGAGKSILLDALSFVLGARLEKTFLQDDKL
CEEEEEECCEEEEEECCCHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
TEVSATFSIKDNHKAKRLLDELFIDYENDECTFRRVVNKSKQSRLFINGSVAKAADVKKV
CHHEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
SDKLINIYSQNSHQDLLDPKSQLSLLDSFANNDELLKKVTDSFYQLQKINSEIAQLQEYI
HHHHHHHHCCCCCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTQNSQRELLEYKLDELVALELGENEFEQLAQRQKCLSSVDDIGYSLNHITSLIYDDEIN
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCH
IIAMLSELEKEVAKLDEGAFRNLQELISQTKVYAQESYAEAQNQLESLEQDPEELAKVEQ
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RMSQIYDLARRHKIEPNYMYQYIQELQTELDNFTQDSTRLSQLNEQKQNLQQQYSEYANK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSQARKQAAKEFSKQVEKNIRSLNIPKGSFEAQILPAQSKTSKGVDECQFMINFNLGEQL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHEEEEEEECCCHHH
APVKKVASGGELSRIGLSIQAVSAAKRSYPTLVFDEVDVGISGATAEIVGKLLKKLSERL
HHHHHHHCCCCCHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
QVLCITHQPQVAAQGQTHLHVSKKYLKDTTESKIIELNHQQRIEEIAKIVGGVDISENTL
HEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHEECCHHHHHHHHHHHHCCCCCCHHHH
SHARELLGL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA