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The map label for this gene is tolR [H]

Identifier: 89255758

GI number: 89255758

Start: 315552

End: 315992

Strand: Direct

Name: tolR [H]

Synonym: FTL_0332

Alternate gene names: 89255758

Gene position: 315552-315992 (Clockwise)

Preceding gene: 89255757

Following gene: 89255759

Centisome position: 16.64

GC content: 34.92

Gene sequence:

>441_bases
ATGAAAAAAAGAAATAAAAGATTTTTTAGAAAACAGCGACCTATGGTACAAATCAATGTAGTGCCTTACATTGACGTTAT
GCTTGTTCTACTAGTAATTTTTATGATCACAACACCAATCTTAACTCAGGGTGTAAAAGTTGATCTACCGAAAGCACAAT
CTGAAAAGATACCTTCAAATGATAGTAAACCAATAGTTGTTACGGTAAATAAGCAAGGTGAGTATTTTATTAATCAAGGA
GTTAATGATCCTAAGACAGCTTTAAGTTCAGGTGCATTAGCAAATGCTGTGGTGAGTTTATCACAGCAAAATCCTGGTAA
GCCTGTTTATGTAAGGGGTGATAGTAGCGCAAGTTATGGTGAAGTTGTAAAAGCTATGGCTCTTATTCAAAAAGCAGGCA
TTGATAAAGTGGGGTTAGTCACAGAAGATGGCAAATCTTAA

Upstream 100 bases:

>100_bases
GTCATTCCAAGATGATTTATGTATTTTACTTCTAAAAGAAGCACATAGAGATGAAATTCAACATCAAAATCAAGAAAGCT
TGTAATAAAGACTTTTGCTT

Downstream 100 bases:

>100_bases
TTATCATAAATTTTTACGCTTTTGTAATAAGCAAATAGATGAGAACCCATTTTTAGTTAAGGCTATATTAATCCATATTG
CTTTGATAATTCTGCTATAT

Product: TolR protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKKRNKRFFRKQRPMVQINVVPYIDVMLVLLVIFMITTPILTQGVKVDLPKAQSEKIPSNDSKPIVVTVNKQGEYFINQG
VNDPKTALSSGALANAVVSLSQQNPGKPVYVRGDSSASYGEVVKAMALIQKAGIDKVGLVTEDGKS

Sequences:

>Translated_146_residues
MKKRNKRFFRKQRPMVQINVVPYIDVMLVLLVIFMITTPILTQGVKVDLPKAQSEKIPSNDSKPIVVTVNKQGEYFINQG
VNDPKTALSSGALANAVVSLSQQNPGKPVYVRGDSSASYGEVVKAMALIQKAGIDKVGLVTEDGKS
>Mature_146_residues
MKKRNKRFFRKQRPMVQINVVPYIDVMLVLLVIFMITTPILTQGVKVDLPKAQSEKIPSNDSKPIVVTVNKQGEYFINQG
VNDPKTALSSGALANAVVSLSQQNPGKPVYVRGDSSASYGEVVKAMALIQKAGIDKVGLVTEDGKS

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=129, Percent_Identity=36.4341085271318, Blast_Score=81, Evalue=2e-17,
Organism=Escherichia coli, GI1786959, Length=127, Percent_Identity=40.1574803149606, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15902; Mature: 15902

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRNKRFFRKQRPMVQINVVPYIDVMLVLLVIFMITTPILTQGVKVDLPKAQSEKIPSN
CCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
DSKPIVVTVNKQGEYFINQGVNDPKTALSSGALANAVVSLSQQNPGKPVYVRGDSSASYG
CCCCEEEEECCCCCEEECCCCCCHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCHH
EVVKAMALIQKAGIDKVGLVTEDGKS
HHHHHHHHHHHCCCCCEEEEECCCCC
>Mature Secondary Structure
MKKRNKRFFRKQRPMVQINVVPYIDVMLVLLVIFMITTPILTQGVKVDLPKAQSEKIPSN
CCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
DSKPIVVTVNKQGEYFINQGVNDPKTALSSGALANAVVSLSQQNPGKPVYVRGDSSASYG
CCCCEEEEECCCCCEEECCCCCCHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCHH
EVVKAMALIQKAGIDKVGLVTEDGKS
HHHHHHHHHHHCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]