| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is aceE [H]
Identifier: 89255740
GI number: 89255740
Start: 295558
End: 298239
Strand: Direct
Name: aceE [H]
Synonym: FTL_0309
Alternate gene names: 89255740
Gene position: 295558-298239 (Clockwise)
Preceding gene: 89255739
Following gene: 89255741
Centisome position: 15.59
GC content: 38.29
Gene sequence:
>2682_bases ATGTCGGATTTCACTAAAGATATTGATGTTTTAGAAACCCAAGAATGGCTTGAGGCTTTTGAAGATGTCATAAAAAGAGA AGGTGCTGATAGAGCCAAGTTTTTATTTGAACAATTACTTGCTAAAGGTTCCGAGCTTGGTATAAAAAGTGCTTACTCAA CTGCTAAAGTTAAGAACTATGTCAACTCTATAGATGTCTCTGAACAACCAAGTTATCCAGGAGATATAGAGCTTGAACAA AAGATTGAAGCTATCAATAGATGGAACTCTACAGTTATAGTAGCTGCAGCTAATAAGAAAGATGGTTCTATAGGTGGACA TATTGGTACTGGTGCCGGCGCTATGACGCTTTATGAAGTAGGTTTCAACCATTTTTGGAAAGCACCCAATGATGAACATG CTGGTGATTTGATATTCTATCAAGGACATCTTTCTCCTATTGTTTATGCGCGTTCATTCCTAGAAGGTAGAATAACTGCA GAACAGTTAGAAAACTTTAGAAAGCAAGCATTTAATGGGCAAAATGCGGTATCTTCATATCCTCATCCTTATCTACAACC GACTTATTGGCAGTTCCCAACTGTTTCTATGGGGTTAGGACCACTTCAAGCTATTTATCAAGCTAGATTTATGAAGTATC TAGAGGCTAGGGGTTTAGCAAAAACATCTGATCGCAAAGTTTGGGCATTCTGTGGTGATGGCGAGATGGATGAGCCAGAA TCAATTGGTTCTATCACTAGAGCAGGTCGTGAAGGGCTGGATAACCTTATATTTGTAGTTAATTGTAATCTACAAAGGCT AGATGGTCTGGTAAATGGTAATGGTAATATTGTTGAAGAATTAGCAGATGTATTTGCTGGTGCTGGTTGGAATGTTATCA AGGTGTTGTGGAGTAGTGACTGGGATAAATTATTACAAGATCCAAGAGGTGGTAAAAAACTTGCTCAAAGGTTAAGTGAA TTAAATGATGGACAATTCCATACAATTAAAGCTCATGGTGGTGCTGAGTGTCGTAGAGTTGTCTTTAGCGGTGATGAAGA TTTAGAAGCGCTAGCTAAGGATATGACAGATGATGATATTCAAGCATTACGTCGTGGAGGCCATGATCCATTGAAAATTT ATGCAGCATATAAGAAGGCGGTAGAGAATCCAAATGGTCGTCCAACACTAATTCTTCCTATGACTGTTAAGGGCTATGGT TTAGGGGAGTGGGGTGAGTCAAAAAATATTGCCCACAATGTCAAAAAACTTGATACTGATGCACTTGAGCACATCAAAAA TAGATTCAATGTCCCGGCTTCAAAAGAGGATATCGAAAACTATAGACTCATCAAGCTAGATGAAAATTCGCCTGAGATGA AATATCTACACTCTAAGAGAAAAGACCTAGGTGGTTATATTCCTAAGAGATTGGAGAATAAGCAAGCATTAGAGATTCCA AGCTATAAAGATTTTGCTAAGAGCTTATTGGATGATAGTGGTGATAGAGAATTTTCAACTACTACCGCATTTGTAAGAAT ATTATCCTACTTGGCAAAAGATAAGAATCTAGGGAAGCATATTGTACCAATCACGGTAGACGAGTCACGTACTTTTGGTA TGGAGGGCTTGTTTAGGCAGTTAGGTATCTATAACCCACATGGTCAGCAATATGTGCCAGAAGATAAACAGCAAGTAATG TTCTATAAAGAGTCTGTAGATGGTCAGATTTTACAAGAAGGTATTAATGAGCAAGGAGGTTTTTGTTCTTGGATTGCCGC AGCTACTTCATATAGCGTACACAAGGTTCCAATGATTCCTTTCATGATTTACTACTCAATGTTTGGTTTCCAAAGATTTG GTGATCTTGCTTGGGCAGCTGGCGATTCGATGGCAAAAGGTTTTGTAATTGGTGGGACTTCAGGACGTACAACTCTAAAT GGCGAAGGTTTGCAGCATGAAGATGGTCATAGCCATATCCAAGCTGGTCTTATACCTAATTGTATCTCTTATGATCCTAC ATATGCTTATGAATTAGCTGTAATCCTTGGCGAAGGTATGAAGAGAATGTATGTTGATGGTGATCATGTATATTACTATA TTACAGTAATGAATGAGAACTACTTTCATAGAGCGATGCCAGAGGGCTGTGAAGAAGGTATCATCAAGGGCTTATATAAG TTAGATGAAGAGAAAAAGCCAGCATCTAAGCATGTACAGCTATTGGGTTCTGGTTCTATTCTAAGAGAAGTTGAAGCTGC AGCTAAGATGCTAAAAGAAGAGTATGGAATTACTTCTAATGTTTGGAGTATGACTTCAGCAAATGAGCTTTATAGAGAAG CTAAAGATGTAGCTAGAGCTAATATGCTTCACCCAACAGCAGAGAAAAAAGAAAGCTATATCGAGAAGTGCTTTAAAAAT GAGCAAGGTCCTGTAATCGCTTCTACGGACTATATTAAGCTTTATACTGATCAGTTAAGAGAATTTATACCGCATACTTT TGTGAACTTAGGTACAGACGGCTTTGGTAGATCTGATACTCGAGCAGCGCTAAGAAGTTTCTTTGAGGTTGATAGATATC ATGTCGTTGTTGCTTCATTATATGCTCTATATTTAGATGGCAAAGTTGAGGCTAGCGAAGTTAAAGCTGCGATTGAGAAG TACAATATAGATCCAGAGCGTATGGCACCTTTTTATAGCTAA
Upstream 100 bases:
>100_bases TTAACAAGCTTGTTACTGGTTGATGTTGTCTATCTATTGACTTATAATCGAGCAATAAGTTTTAATTTCGTTAATATTCG ATTAATTCGGAGGATAAAGG
Downstream 100 bases:
>100_bases TTGGTAAGGAGATATTAATGTCTATAGAGATAGTTAAAGTCCCTGATATTGGGGATTATGATAACGTTGATGTGATCGAG GTTAATGTTGCTGTAGGTGA
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 893; Mature: 892
Protein sequence:
>893_residues MSDFTKDIDVLETQEWLEAFEDVIKREGADRAKFLFEQLLAKGSELGIKSAYSTAKVKNYVNSIDVSEQPSYPGDIELEQ KIEAINRWNSTVIVAAANKKDGSIGGHIGTGAGAMTLYEVGFNHFWKAPNDEHAGDLIFYQGHLSPIVYARSFLEGRITA EQLENFRKQAFNGQNAVSSYPHPYLQPTYWQFPTVSMGLGPLQAIYQARFMKYLEARGLAKTSDRKVWAFCGDGEMDEPE SIGSITRAGREGLDNLIFVVNCNLQRLDGLVNGNGNIVEELADVFAGAGWNVIKVLWSSDWDKLLQDPRGGKKLAQRLSE LNDGQFHTIKAHGGAECRRVVFSGDEDLEALAKDMTDDDIQALRRGGHDPLKIYAAYKKAVENPNGRPTLILPMTVKGYG LGEWGESKNIAHNVKKLDTDALEHIKNRFNVPASKEDIENYRLIKLDENSPEMKYLHSKRKDLGGYIPKRLENKQALEIP SYKDFAKSLLDDSGDREFSTTTAFVRILSYLAKDKNLGKHIVPITVDESRTFGMEGLFRQLGIYNPHGQQYVPEDKQQVM FYKESVDGQILQEGINEQGGFCSWIAAATSYSVHKVPMIPFMIYYSMFGFQRFGDLAWAAGDSMAKGFVIGGTSGRTTLN GEGLQHEDGHSHIQAGLIPNCISYDPTYAYELAVILGEGMKRMYVDGDHVYYYITVMNENYFHRAMPEGCEEGIIKGLYK LDEEKKPASKHVQLLGSGSILREVEAAAKMLKEEYGITSNVWSMTSANELYREAKDVARANMLHPTAEKKESYIEKCFKN EQGPVIASTDYIKLYTDQLREFIPHTFVNLGTDGFGRSDTRAALRSFFEVDRYHVVVASLYALYLDGKVEASEVKAAIEK YNIDPERMAPFYS
Sequences:
>Translated_893_residues MSDFTKDIDVLETQEWLEAFEDVIKREGADRAKFLFEQLLAKGSELGIKSAYSTAKVKNYVNSIDVSEQPSYPGDIELEQ KIEAINRWNSTVIVAAANKKDGSIGGHIGTGAGAMTLYEVGFNHFWKAPNDEHAGDLIFYQGHLSPIVYARSFLEGRITA EQLENFRKQAFNGQNAVSSYPHPYLQPTYWQFPTVSMGLGPLQAIYQARFMKYLEARGLAKTSDRKVWAFCGDGEMDEPE SIGSITRAGREGLDNLIFVVNCNLQRLDGLVNGNGNIVEELADVFAGAGWNVIKVLWSSDWDKLLQDPRGGKKLAQRLSE LNDGQFHTIKAHGGAECRRVVFSGDEDLEALAKDMTDDDIQALRRGGHDPLKIYAAYKKAVENPNGRPTLILPMTVKGYG LGEWGESKNIAHNVKKLDTDALEHIKNRFNVPASKEDIENYRLIKLDENSPEMKYLHSKRKDLGGYIPKRLENKQALEIP SYKDFAKSLLDDSGDREFSTTTAFVRILSYLAKDKNLGKHIVPITVDESRTFGMEGLFRQLGIYNPHGQQYVPEDKQQVM FYKESVDGQILQEGINEQGGFCSWIAAATSYSVHKVPMIPFMIYYSMFGFQRFGDLAWAAGDSMAKGFVIGGTSGRTTLN GEGLQHEDGHSHIQAGLIPNCISYDPTYAYELAVILGEGMKRMYVDGDHVYYYITVMNENYFHRAMPEGCEEGIIKGLYK LDEEKKPASKHVQLLGSGSILREVEAAAKMLKEEYGITSNVWSMTSANELYREAKDVARANMLHPTAEKKESYIEKCFKN EQGPVIASTDYIKLYTDQLREFIPHTFVNLGTDGFGRSDTRAALRSFFEVDRYHVVVASLYALYLDGKVEASEVKAAIEK YNIDPERMAPFYS >Mature_892_residues SDFTKDIDVLETQEWLEAFEDVIKREGADRAKFLFEQLLAKGSELGIKSAYSTAKVKNYVNSIDVSEQPSYPGDIELEQK IEAINRWNSTVIVAAANKKDGSIGGHIGTGAGAMTLYEVGFNHFWKAPNDEHAGDLIFYQGHLSPIVYARSFLEGRITAE QLENFRKQAFNGQNAVSSYPHPYLQPTYWQFPTVSMGLGPLQAIYQARFMKYLEARGLAKTSDRKVWAFCGDGEMDEPES IGSITRAGREGLDNLIFVVNCNLQRLDGLVNGNGNIVEELADVFAGAGWNVIKVLWSSDWDKLLQDPRGGKKLAQRLSEL NDGQFHTIKAHGGAECRRVVFSGDEDLEALAKDMTDDDIQALRRGGHDPLKIYAAYKKAVENPNGRPTLILPMTVKGYGL GEWGESKNIAHNVKKLDTDALEHIKNRFNVPASKEDIENYRLIKLDENSPEMKYLHSKRKDLGGYIPKRLENKQALEIPS YKDFAKSLLDDSGDREFSTTTAFVRILSYLAKDKNLGKHIVPITVDESRTFGMEGLFRQLGIYNPHGQQYVPEDKQQVMF YKESVDGQILQEGINEQGGFCSWIAAATSYSVHKVPMIPFMIYYSMFGFQRFGDLAWAAGDSMAKGFVIGGTSGRTTLNG EGLQHEDGHSHIQAGLIPNCISYDPTYAYELAVILGEGMKRMYVDGDHVYYYITVMNENYFHRAMPEGCEEGIIKGLYKL DEEKKPASKHVQLLGSGSILREVEAAAKMLKEEYGITSNVWSMTSANELYREAKDVARANMLHPTAEKKESYIEKCFKNE QGPVIASTDYIKLYTDQLREFIPHTFVNLGTDGFGRSDTRAALRSFFEVDRYHVVVASLYALYLDGKVEASEVKAAIEKY NIDPERMAPFYS
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=890, Percent_Identity=56.1797752808989, Blast_Score=1011, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 100269; Mature: 100138
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFTKDIDVLETQEWLEAFEDVIKREGADRAKFLFEQLLAKGSELGIKSAYSTAKVKNY CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VNSIDVSEQPSYPGDIELEQKIEAINRWNSTVIVAAANKKDGSIGGHIGTGAGAMTLYEV HHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH GFNHFWKAPNDEHAGDLIFYQGHLSPIVYARSFLEGRITAEQLENFRKQAFNGQNAVSSY HHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC PHPYLQPTYWQFPTVSMGLGPLQAIYQARFMKYLEARGLAKTSDRKVWAFCGDGEMDEPE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCH SIGSITRAGREGLDNLIFVVNCNLQRLDGLVNGNGNIVEELADVFAGAGWNVIKVLWSSD HHHHHHHHHHHCCCCEEEEEECCHHHHCCEECCCCHHHHHHHHHHCCCCCCEEHEECCCC WDKLLQDPRGGKKLAQRLSELNDGQFHTIKAHGGAECRRVVFSGDEDLEALAKDMTDDDI HHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHEEEECCCHHHHHHHHCCCCHHH QALRRGGHDPLKIYAAYKKAVENPNGRPTLILPMTVKGYGLGEWGESKNIAHNVKKLDTD HHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH ALEHIKNRFNVPASKEDIENYRLIKLDENSPEMKYLHSKRKDLGGYIPKRLENKQALEIP HHHHHHHHCCCCCCHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCC SYKDFAKSLLDDSGDREFSTTTAFVRILSYLAKDKNLGKHIVPITVDESRTFGMEGLFRQ CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHH LGIYNPHGQQYVPEDKQQVMFYKESVDGQILQEGINEQGGFCSWIAAATSYSVHKVPMIP HCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCEECCCHHH FMIYYSMFGFQRFGDLAWAAGDSMAKGFVIGGTSGRTTLNGEGLQHEDGHSHIQAGLIPN HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCCCCCCCCCCHHHHHCCCCC CISYDPTYAYELAVILGEGMKRMYVDGDHVYYYITVMNENYFHRAMPEGCEEGIIKGLYK CCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHH LDEEKKPASKHVQLLGSGSILREVEAAAKMLKEEYGITSNVWSMTSANELYREAKDVARA HCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHH NMLHPTAEKKESYIEKCFKNEQGPVIASTDYIKLYTDQLREFIPHTFVNLGTDGFGRSDT HCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH RAALRSFFEVDRYHVVVASLYALYLDGKVEASEVKAAIEKYNIDPERMAPFYS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCCC >Mature Secondary Structure SDFTKDIDVLETQEWLEAFEDVIKREGADRAKFLFEQLLAKGSELGIKSAYSTAKVKNY CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VNSIDVSEQPSYPGDIELEQKIEAINRWNSTVIVAAANKKDGSIGGHIGTGAGAMTLYEV HHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH GFNHFWKAPNDEHAGDLIFYQGHLSPIVYARSFLEGRITAEQLENFRKQAFNGQNAVSSY HHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC PHPYLQPTYWQFPTVSMGLGPLQAIYQARFMKYLEARGLAKTSDRKVWAFCGDGEMDEPE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCH SIGSITRAGREGLDNLIFVVNCNLQRLDGLVNGNGNIVEELADVFAGAGWNVIKVLWSSD HHHHHHHHHHHCCCCEEEEEECCHHHHCCEECCCCHHHHHHHHHHCCCCCCEEHEECCCC WDKLLQDPRGGKKLAQRLSELNDGQFHTIKAHGGAECRRVVFSGDEDLEALAKDMTDDDI HHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHEEEECCCHHHHHHHHCCCCHHH QALRRGGHDPLKIYAAYKKAVENPNGRPTLILPMTVKGYGLGEWGESKNIAHNVKKLDTD HHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH ALEHIKNRFNVPASKEDIENYRLIKLDENSPEMKYLHSKRKDLGGYIPKRLENKQALEIP HHHHHHHHCCCCCCHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCC SYKDFAKSLLDDSGDREFSTTTAFVRILSYLAKDKNLGKHIVPITVDESRTFGMEGLFRQ CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHH LGIYNPHGQQYVPEDKQQVMFYKESVDGQILQEGINEQGGFCSWIAAATSYSVHKVPMIP HCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCEECCCHHH FMIYYSMFGFQRFGDLAWAAGDSMAKGFVIGGTSGRTTLNGEGLQHEDGHSHIQAGLIPN HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCCCCCCCCCCHHHHHCCCCC CISYDPTYAYELAVILGEGMKRMYVDGDHVYYYITVMNENYFHRAMPEGCEEGIIKGLYK CCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHH LDEEKKPASKHVQLLGSGSILREVEAAAKMLKEEYGITSNVWSMTSANELYREAKDVARA HCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHH NMLHPTAEKKESYIEKCFKNEQGPVIASTDYIKLYTDQLREFIPHTFVNLGTDGFGRSDT HCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH RAALRSFFEVDRYHVVVASLYALYLDGKVEASEVKAAIEKYNIDPERMAPFYS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9171401; 10984043 [H]