| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is isftu2
Identifier: 89255703
GI number: 89255703
Start: 256826
End: 257488
Strand: Direct
Name: isftu2
Synonym: FTL_0270
Alternate gene names: NA
Gene position: 256826-257488 (Clockwise)
Preceding gene: 89255701
Following gene: 89255704
Centisome position: 13.55
GC content: 28.51
Gene sequence:
>663_bases ATGTTACCATTTTATTATGGTAAATATAGATCAATACATAAGCGTTTTAAAGATTGGTGTGATAAAGATATATTTTCTAG ATTATTTAAATCAGTACAAAACCCTGATTTACAAGAAGTCATGCTTGATTCAACAATAGCAAGAGCACATGCTTGTGCTA CGGGATATGATAAAGATGATAACCAAGCAATTGGTAGATCAGTTGGTGGGATAACCACTAAAATCCATGCTATGACTGAT GCTTTAGGTAATCCAATAGAAATATTGTTGTCAGAAGGTAAAACTCATGATAGTAAAGTAGCTAATTTACTAAAAAATGT ATATAATACAAAAGTTATTGCTGATAGAGCATATCATTCTAATGAAATCAGGCAGCATATTCAAAGTATATCCTCTGAAG CTGTTATCCCTTGTAAATCAAATACTCTAAACCATATACCTTTTGATAGTCATGTATATAAAGAAAGACATTTGATAGAG AATTTCTTTTCTAAAATTAAGCATTTTAGAAGAGTATTCTCTAGATTTGATAAAACCATTTCAGCATATATAGGAATGAT TAAATTAGCTTGTACTTTTATTTGGCTACTGAGAAACTATTTTTGTGCACAGAACCTAATTAATATAGTCTTTAAACAAT TAAGTATTTTCTCTATTAAATAA
Upstream 100 bases:
>100_bases TTTAAAATCATAAAAAGGTATACATACCAATGATGAAGCCAAATTAAGATTATTTATTGAAGCTGTATTTTATGTGTTAC GTACAGGCTGTTAATGGAGG
Downstream 100 bases:
>100_bases AAAGTGTACAAACATGAGTATATCTTTTGAGTTTAGTTTTATAAGTGTTGTTTAGAATCTCTAAAAAGGAGTTATTGAAG TGTATGTTAAGTAATTATTT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDDNQAIGRSVGGITTKIHAMTD ALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHSNEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIE NFFSKIKHFRRVFSRFDKTISAYIGMIKLACTFIWLLRNYFCAQNLINIVFKQLSIFSIK
Sequences:
>Translated_220_residues MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDDNQAIGRSVGGITTKIHAMTD ALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHSNEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIE NFFSKIKHFRRVFSRFDKTISAYIGMIKLACTFIWLLRNYFCAQNLINIVFKQLSIFSIK >Mature_220_residues MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDDNQAIGRSVGGITTKIHAMTD ALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHSNEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIE NFFSKIKHFRRVFSRFDKTISAYIGMIKLACTFIWLLRNYFCAQNLINIVFKQLSIFSIK
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 25455; Mature: 25455
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC NQAIGRSVGGITTKIHAMTDALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHS HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIENFFSKIKHFRRVFSRFDKTI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAYIGMIKLACTFIWLLRNYFCAQNLINIVFKQLSIFSIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLPFYYGKYRSIHKRFKDWCDKDIFSRLFKSVQNPDLQEVMLDSTIARAHACATGYDKDD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC NQAIGRSVGGITTKIHAMTDALGNPIEILLSEGKTHDSKVANLLKNVYNTKVIADRAYHS HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NEIRQHIQSISSEAVIPCKSNTLNHIPFDSHVYKERHLIENFFSKIKHFRRVFSRFDKTI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAYIGMIKLACTFIWLLRNYFCAQNLINIVFKQLSIFSIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8126444 [H]