| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is dfrA [H]
Identifier: 89255657
GI number: 89255657
Start: 224465
End: 225007
Strand: Reverse
Name: dfrA [H]
Synonym: FTL_0223
Alternate gene names: 89255657
Gene position: 225007-224465 (Counterclockwise)
Preceding gene: 89255702
Following gene: 89255656
Centisome position: 11.87
GC content: 27.07
Gene sequence:
>543_bases ATGCTAAAATACATCAAAATGACTAAAAATAGATTTCTCAAAATGATCTCACTAATCGTTGCTTATGATAAAAACTTTGG TATAGGTAAAGAAAATACTCTAGCATGGAAACTATCAGAAGATCTTAAGAACTTTAAAAAAATAACAGAAAACAACTATA TTGTTATGGGTAGAAAAACCTTTGAATCGATTGGTCGCCCACTACCGAATCGTAAAAATATTATTTTAACTAGAAACAAA GATTACAAACAAGATAAATGTTTAATAATAAATAGTACTCAGGATATTTTAAATTTTGCTGAATCAAAACCACACTACGA AATATTTATAATCGGTGGTGCACAGATCTATAAAGAATTTCTAAAATACGCAGATAGATTGTATATAACCGAAGTTGATG CAGAAATGACTGATCTTGATGCTTTCTTTCCACAATGGGATAAATCAAAATATAAACGTATTGGTCACAAACAATTCAAA AAAAATGATAAAAATGAGTTTGACTTTACATTTAGCATCTTTGAAAAAAATAAAAATTTGTAA
Upstream 100 bases:
>100_bases TTTATATAATTAAACATTCTACTCATACATGAAGTATAAGCTGTAAAATTTTACCACAGTTAATTTATAAATTACAAAAG GTATTTTATATTTGTTTTAA
Downstream 100 bases:
>100_bases TTTAGTCAGACCATTTAAGTAGAATTTTGAGTAATCATAATGTAGATTTAAATTACACAGAATATTAAATTTTTTAATCC AATGTCAGCTCAAGTCTCAG
Product: dihydrofolate reductase type I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MLKYIKMTKNRFLKMISLIVAYDKNFGIGKENTLAWKLSEDLKNFKKITENNYIVMGRKTFESIGRPLPNRKNIILTRNK DYKQDKCLIINSTQDILNFAESKPHYEIFIIGGAQIYKEFLKYADRLYITEVDAEMTDLDAFFPQWDKSKYKRIGHKQFK KNDKNEFDFTFSIFEKNKNL
Sequences:
>Translated_180_residues MLKYIKMTKNRFLKMISLIVAYDKNFGIGKENTLAWKLSEDLKNFKKITENNYIVMGRKTFESIGRPLPNRKNIILTRNK DYKQDKCLIINSTQDILNFAESKPHYEIFIIGGAQIYKEFLKYADRLYITEVDAEMTDLDAFFPQWDKSKYKRIGHKQFK KNDKNEFDFTFSIFEKNKNL >Mature_180_residues MLKYIKMTKNRFLKMISLIVAYDKNFGIGKENTLAWKLSEDLKNFKKITENNYIVMGRKTFESIGRPLPNRKNIILTRNK DYKQDKCLIINSTQDILNFAESKPHYEIFIIGGAQIYKEFLKYADRLYITEVDAEMTDLDAFFPQWDKSKYKRIGHKQFK KNDKNEFDFTFSIFEKNKNL
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=186, Percent_Identity=31.1827956989247, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI28827793, Length=187, Percent_Identity=30.4812834224599, Blast_Score=67, Evalue=6e-12, Organism=Escherichia coli, GI1786233, Length=162, Percent_Identity=37.6543209876543, Blast_Score=117, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17505899, Length=183, Percent_Identity=30.0546448087432, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324810, Length=140, Percent_Identity=32.8571428571429, Blast_Score=76, Evalue=3e-15, Organism=Drosophila melanogaster, GI116008026, Length=178, Percent_Identity=31.4606741573034, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24647458, Length=178, Percent_Identity=31.4606741573034, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 21497; Mature: 21497
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKYIKMTKNRFLKMISLIVAYDKNFGIGKENTLAWKLSEDLKNFKKITENNYIVMGRKT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCEEEEECHH FESIGRPLPNRKNIILTRNKDYKQDKCLIINSTQDILNFAESKPHYEIFIIGGAQIYKEF HHHHCCCCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHCCCCEEEEEEECHHHHHHH LKYADRLYITEVDAEMTDLDAFFPQWDKSKYKRIGHKQFKKNDKNEFDFTFSIFEKNKNL HHHHHEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCC >Mature Secondary Structure MLKYIKMTKNRFLKMISLIVAYDKNFGIGKENTLAWKLSEDLKNFKKITENNYIVMGRKT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCEEEEECHH FESIGRPLPNRKNIILTRNKDYKQDKCLIINSTQDILNFAESKPHYEIFIIGGAQIYKEF HHHHCCCCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHCCCCEEEEEEECHHHHHHH LKYADRLYITEVDAEMTDLDAFFPQWDKSKYKRIGHKQFKKNDKNEFDFTFSIFEKNKNL HHHHHEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840350; 9384377 [H]