| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255579
Identifier: 89255579
GI number: 89255579
Start: 148394
End: 148801
Strand: Direct
Name: 89255579
Synonym: FTL_0142
Alternate gene names: NA
Gene position: 148394-148801 (Clockwise)
Preceding gene: 89255578
Following gene: 89255580
Centisome position: 7.83
GC content: 32.11
Gene sequence:
>408_bases GTGATAAGAAAAATAACCGCACTATTTTTATTTTGTTTACTTATAGTTAGTTGTATGCCTTTTTTAGGAGGTAATATGAT TGTCAGAGATAACCGCTTTGAGTCTGATTTGGGACAACATAGTCTCCAGATGCAGCAAGGTACAACGGTTAAACAGTTAT ATGATGCAATAAAAAAAGCTGTAAAAGCTAATCCTGGTGAGTTTGAGATAAAGGCTGATGATTATAGTAATCAAAAAGCT ACATTATGGACATTTTCAAATAAATATAATCAACCAGTTACTTTCGAAGCGGTTCAAAGAGCTGGTCAAGTTTATTTAAG TATAAGTGTAGGTGAAGAGGGTCAGGCAAGGGTGAATAATGATGTTATTTATTATCTACAAGATTTAGTTTTGAATAATT TACAATAG
Upstream 100 bases:
>100_bases CGAGGAGAGATTTTTATAGCTATAGGATATATATGGTTAGTGTCTTAGCATCATTAATAGCTGTTATATTAGGGTTTTAT ATAGTTATGGGAGTTTATAA
Downstream 100 bases:
>100_bases TCTTTTTCTTTAGCAGCCGCGATTACATCTATCAGAAATTATTATATTATATATAAATAATAATAGTTTAAAATTCTATG ATTTTAATATTAAAATTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MIRKITALFLFCLLIVSCMPFLGGNMIVRDNRFESDLGQHSLQMQQGTTVKQLYDAIKKAVKANPGEFEIKADDYSNQKA TLWTFSNKYNQPVTFEAVQRAGQVYLSISVGEEGQARVNNDVIYYLQDLVLNNLQ
Sequences:
>Translated_135_residues MIRKITALFLFCLLIVSCMPFLGGNMIVRDNRFESDLGQHSLQMQQGTTVKQLYDAIKKAVKANPGEFEIKADDYSNQKA TLWTFSNKYNQPVTFEAVQRAGQVYLSISVGEEGQARVNNDVIYYLQDLVLNNLQ >Mature_135_residues MIRKITALFLFCLLIVSCMPFLGGNMIVRDNRFESDLGQHSLQMQQGTTVKQLYDAIKKAVKANPGEFEIKADDYSNQKA TLWTFSNKYNQPVTFEAVQRAGQVYLSISVGEEGQARVNNDVIYYLQDLVLNNLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15331; Mature: 15331
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKITALFLFCLLIVSCMPFLGGNMIVRDNRFESDLGQHSLQMQQGTTVKQLYDAIKKA CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH VKANPGEFEIKADDYSNQKATLWTFSNKYNQPVTFEAVQRAGQVYLSISVGEEGQARVNN HCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCCCCCCCC DVIYYLQDLVLNNLQ CHHHHHHHHHHHCCC >Mature Secondary Structure MIRKITALFLFCLLIVSCMPFLGGNMIVRDNRFESDLGQHSLQMQQGTTVKQLYDAIKKA CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH VKANPGEFEIKADDYSNQKATLWTFSNKYNQPVTFEAVQRAGQVYLSISVGEEGQARVNN HCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCCCCCCCC DVIYYLQDLVLNNLQ CHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA