Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89255488

Identifier: 89255488

GI number: 89255488

Start: 42078

End: 42449

Strand: Reverse

Name: 89255488

Synonym: FTL_0041

Alternate gene names: NA

Gene position: 42449-42078 (Counterclockwise)

Preceding gene: 89255489

Following gene: 89255486

Centisome position: 2.24

GC content: 34.95

Gene sequence:

>372_bases
ATGACTGCACCCGTCAAGATAGAACAATCATCACAAAAAATTCAGATGACTGCTCCAGTAATGGTAAAGGGTGATACTAA
CAATGAGTGGACTATAGCTTTTGTACTACCTGCACAATATACTCTTGAAAATGCGCCAAAACCAACTAATGACAAAGTCA
AATTAGTTGAAAAACCTGAAACGAAAATAGCTGTAATTACATTTAGTGGTTTCTTGGACAAAGATACTATTGATTCCAAT
ACTACTAAATTGAAAGCTTGGGTAAAGGCTAATAATTACCAGATAGTTGGTCAACCTGAAGCAGCTGGTTACAATCCGCC
ATGGACAATACCATTTTTACGTACTAATGAAGTTATGATACCAATTAAATAA

Upstream 100 bases:

>100_bases
AACAGTACAAGACTCGGACTATAAATCAGCTGTTAATAAAGGTTTTGGTTATCTATTTAGATACATAACTGGAGCTAATA
TCGCTAAGCAGGATATCCAA

Downstream 100 bases:

>100_bases
TTATAATATAGTTATATTCTCGACTAAGTACTCAGCTAGTATTCGTCTTTTGTCTTGTTTTGATGTCTGCAGAAAATAGC
AATATAAGTTAACATCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MTAPVKIEQSSQKIQMTAPVMVKGDTNNEWTIAFVLPAQYTLENAPKPTNDKVKLVEKPETKIAVITFSGFLDKDTIDSN
TTKLKAWVKANNYQIVGQPEAAGYNPPWTIPFLRTNEVMIPIK

Sequences:

>Translated_123_residues
MTAPVKIEQSSQKIQMTAPVMVKGDTNNEWTIAFVLPAQYTLENAPKPTNDKVKLVEKPETKIAVITFSGFLDKDTIDSN
TTKLKAWVKANNYQIVGQPEAAGYNPPWTIPFLRTNEVMIPIK
>Mature_122_residues
TAPVKIEQSSQKIQMTAPVMVKGDTNNEWTIAFVLPAQYTLENAPKPTNDKVKLVEKPETKIAVITFSGFLDKDTIDSNT
TKLKAWVKANNYQIVGQPEAAGYNPPWTIPFLRTNEVMIPIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13749; Mature: 13618

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPVKIEQSSQKIQMTAPVMVKGDTNNEWTIAFVLPAQYTLENAPKPTNDKVKLVEKPE
CCCCEEEECCCCEEEEECCEEEECCCCCCEEEEEEECCEEEECCCCCCCCCCEEEEECCC
TKIAVITFSGFLDKDTIDSNTTKLKAWVKANNYQIVGQPEAAGYNPPWTIPFLRTNEVMI
CEEEEEEEECCCCCCCCCCCCEEEEEEEEECCEEEEECCCCCCCCCCEEEEEEECCEEEE
PIK
EEC
>Mature Secondary Structure 
TAPVKIEQSSQKIQMTAPVMVKGDTNNEWTIAFVLPAQYTLENAPKPTNDKVKLVEKPE
CCCEEEECCCCEEEEECCEEEECCCCCCEEEEEEECCEEEECCCCCCCCCCEEEEECCC
TKIAVITFSGFLDKDTIDSNTTKLKAWVKANNYQIVGQPEAAGYNPPWTIPFLRTNEVMI
CEEEEEEEECCCCCCCCCCCCEEEEEEEEECCEEEEECCCCCCCCCCEEEEEEECCEEEE
PIK
EEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA