Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056674

Identifier: 89056674

GI number: 89056674

Start: 4291705

End: 4292322

Strand: Direct

Name: 89056674

Synonym: Jann_4183

Alternate gene names: NA

Gene position: 4291705-4292322 (Clockwise)

Preceding gene: 89056673

Following gene: 89056675

Centisome position: 99.39

GC content: 60.68

Gene sequence:

>618_bases
ATGGCGACCTCTCGAAAAACACGCCGCTTAAAGCGTAACGGCCTTCTCATGTCCTTGGGCCTGATCTTCGCGGTTTCCGT
CGTGTGGCGGGTCAGCACGCTGGATGTGCCATTGGTTTCAACCGCGCAGGCATCGGACCCTCAACCCATGCAATCCATCG
TTGGGCCAACTGCCCCAATCCGCGCCGCCCTTGATGAAGTGACAGCACTTCGAGACAGGCTGGCCGCCAGGGAAGCCACC
ATCGCGGACCGAGAGCGCGCGGTTGAGGCCGCGCAACTCTTGGTCGAAGAGCGGTTGGCTGTGCTGGAAGCGGCGGAACA
ACGGCTTGAAGGTCTCATTCAGACGTCTGACACGGCGGCGGAAGCGGACATCACACGGCTGACCGAAGTCTATCAAACGA
TGGAAGCCGATCAAACCGCGGCTCTGTTCGCGCAGATGGATCCAAACTTTGCCGCAGGCTTTCTGACCCGTATGACGCCG
GCCGCCAGCGGCGCGATTATGGCAGAACTCGATCCTGTTGCGGCTTACGCAATCTCGGTCGTCATAGCCACGCGCAATGC
GGCGGCCCCAACGCTTGAGCCCCCGCCACCAGATCCTGATCCGGATACCGAATCTTAA

Upstream 100 bases:

>100_bases
CACACCGATGTTTGGCTCCAGACGTGCCGCCGCTAAACGGGAAGCCGCACAATCGACCGCTCCCCTATTCGCACGGCACA
GATCGGCATTGGGCTAAGAC

Downstream 100 bases:

>100_bases
GCCTTAGATGGCAAGCCGATAACAGCGCAGGAGAACCCGCAATGCTTGGAATAGTTGGAATTGCCGTCGTCTTGGTCATG
GTCTTTGGCGGCTATGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MATSRKTRRLKRNGLLMSLGLIFAVSVVWRVSTLDVPLVSTAQASDPQPMQSIVGPTAPIRAALDEVTALRDRLAAREAT
IADRERAVEAAQLLVEERLAVLEAAEQRLEGLIQTSDTAAEADITRLTEVYQTMEADQTAALFAQMDPNFAAGFLTRMTP
AASGAIMAELDPVAAYAISVVIATRNAAAPTLEPPPPDPDPDTES

Sequences:

>Translated_205_residues
MATSRKTRRLKRNGLLMSLGLIFAVSVVWRVSTLDVPLVSTAQASDPQPMQSIVGPTAPIRAALDEVTALRDRLAAREAT
IADRERAVEAAQLLVEERLAVLEAAEQRLEGLIQTSDTAAEADITRLTEVYQTMEADQTAALFAQMDPNFAAGFLTRMTP
AASGAIMAELDPVAAYAISVVIATRNAAAPTLEPPPPDPDPDTES
>Mature_204_residues
ATSRKTRRLKRNGLLMSLGLIFAVSVVWRVSTLDVPLVSTAQASDPQPMQSIVGPTAPIRAALDEVTALRDRLAAREATI
ADRERAVEAAQLLVEERLAVLEAAEQRLEGLIQTSDTAAEADITRLTEVYQTMEADQTAALFAQMDPNFAAGFLTRMTPA
ASGAIMAELDPVAAYAISVVIATRNAAAPTLEPPPPDPDPDTES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21881; Mature: 21750

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSRKTRRLKRNGLLMSLGLIFAVSVVWRVSTLDVPLVSTAQASDPQPMQSIVGPTAPI
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHH
RAALDEVTALRDRLAAREATIADRERAVEAAQLLVEERLAVLEAAEQRLEGLIQTSDTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EADITRLTEVYQTMEADQTAALFAQMDPNFAAGFLTRMTPAASGAIMAELDPVAAYAISV
HHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VIATRNAAAPTLEPPPPDPDPDTES
HHEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATSRKTRRLKRNGLLMSLGLIFAVSVVWRVSTLDVPLVSTAQASDPQPMQSIVGPTAPI
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHH
RAALDEVTALRDRLAAREATIADRERAVEAAQLLVEERLAVLEAAEQRLEGLIQTSDTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EADITRLTEVYQTMEADQTAALFAQMDPNFAAGFLTRMTPAASGAIMAELDPVAAYAISV
HHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VIATRNAAAPTLEPPPPDPDPDTES
HHEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA