Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056638

Identifier: 89056638

GI number: 89056638

Start: 4258312

End: 4258683

Strand: Direct

Name: 89056638

Synonym: Jann_4147

Alternate gene names: NA

Gene position: 4258312-4258683 (Clockwise)

Preceding gene: 89056637

Following gene: 89056639

Centisome position: 98.62

GC content: 62.1

Gene sequence:

>372_bases
ATGAGCGCCCAGATGACCTCTGAAGCGCTGGCCGAGTTCCGGGTGCAGGTACCGGCGTGTCAGCTGGCTCTGTGGAGCGA
CATTCGATCCGGTACGGTCTTGGCCGTCGACGGAACGCTCGACCATCCGCAGGAGTATCTTGATGCGTTCAGCTCCATGG
CGGCGCAAGCTCTGTCTCTGCCCGGCCCGCGGAGCGACGAGGCAGCTTGTACCTTTGCCGCGAATGCGACGGGTCTGCAT
CTGTTTGTCACCGGGGCGGCGATACCCGGCGTTGCACTAACCTGTGTTATGGCCCTGGACGCAGATGTTGATCAAATCGA
AGACGCGGCTGTCTCGTTCTTGTCGTCCGTTGACCCCGCAGGGATGGCGTGA

Upstream 100 bases:

>100_bases
CTCCACGTAAACCCAAGGTCAGTCCACGGCGGGTTAGTGCACTCGACGCTGGTGCTGCGCGGCCAAGGGCACGTCGCCAA
CAGGCCGGGGATCGACTGAT

Downstream 100 bases:

>100_bases
TGCAGACCTCGGCCGTCGTTCACGACATTTTGCTTGCAACCGCCTCGAAAGGGCGCGTCGCAAGAGATCTGTCCAAAGTA
GGTGGCCAAGACGCCATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSAQMTSEALAEFRVQVPACQLALWSDIRSGTVLAVDGTLDHPQEYLDAFSSMAAQALSLPGPRSDEAACTFAANATGLH
LFVTGAAIPGVALTCVMALDADVDQIEDAAVSFLSSVDPAGMA

Sequences:

>Translated_123_residues
MSAQMTSEALAEFRVQVPACQLALWSDIRSGTVLAVDGTLDHPQEYLDAFSSMAAQALSLPGPRSDEAACTFAANATGLH
LFVTGAAIPGVALTCVMALDADVDQIEDAAVSFLSSVDPAGMA
>Mature_122_residues
SAQMTSEALAEFRVQVPACQLALWSDIRSGTVLAVDGTLDHPQEYLDAFSSMAAQALSLPGPRSDEAACTFAANATGLHL
FVTGAAIPGVALTCVMALDADVDQIEDAAVSFLSSVDPAGMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12646; Mature: 12515

Theoretical pI: Translated: 3.72; Mature: 3.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQMTSEALAEFRVQVPACQLALWSDIRSGTVLAVDGTLDHPQEYLDAFSSMAAQALSL
CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
PGPRSDEAACTFAANATGLHLFVTGAAIPGVALTCVMALDADVDQIEDAAVSFLSSVDPA
CCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
GMA
CCC
>Mature Secondary Structure 
SAQMTSEALAEFRVQVPACQLALWSDIRSGTVLAVDGTLDHPQEYLDAFSSMAAQALSL
CCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
PGPRSDEAACTFAANATGLHLFVTGAAIPGVALTCVMALDADVDQIEDAAVSFLSSVDPA
CCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
GMA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA