| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056574
Identifier: 89056574
GI number: 89056574
Start: 4188754
End: 4190283
Strand: Direct
Name: 89056574
Synonym: Jann_4083
Alternate gene names: NA
Gene position: 4188754-4190283 (Clockwise)
Preceding gene: 89056573
Following gene: 89056583
Centisome position: 97.01
GC content: 66.27
Gene sequence:
>1530_bases ATGCTACTTTGGTCGCTGCTGAAAATCATCATCTTCATCGCCATCGTCGTGGGGGCCGTCTTCGGCATCACCTTGCTGAC GGAGATGGACAACCTCGGCATCCTGATCATCTTCGGGCGGGAATTCGTGATCACGCCGCTTCTGGCGGTGATCGGCGCGG TGATCCTGCTTCTGGCGGTGTGGATCCTGTTCAAGGTCGTCGGGCTTTTGGTGGCGTTCCTGCGGATGCTGAACGGGGAT GAAACCGCCCTGACCCGCTACTGGAGCCGCCGGTCCGAGCGCAAGGGCTATGACGCCTTGGGCGACGCGATGATGGCGTT GGCGGCAGGTGAAGGCCGTCTGGCGATCCGCAAGGCAGAGCGTGCGCGCAAGGCGCTGGGACGGCCCGAACTTACGAATT TGGTGGTGGCTCAAGGGGCCGAAATGGTCGGCGATAAGGCGCTGGCGACCGAGACCTACAAGGCCATGGTCACCGATGAC CGCACGCGATTTGTGGGGGTGCGCGGGCTGATGCAGCAGCGACTCGATGACGGCGATACCGACACGGCCCTGAAACTGGC CGAAAAGGCGCTGGTCCTGCGGCCCAAGAACGCCGATGTGCAGACAACGCTGATCTCTTTGCAGTCCCGTCAGGAAGACT GGCAGGGTGCCCGTGGCACGCTGGCGGCTGCCCTGAAAGCAGGCAATGTGCCCCGCGATCTGCACCGCCGCCGCGACGCC GTTCTGGCCCTGGCCCATGCCCGCGACGCCATGGCGGAGGGACAGGTCGTGACCGCCACCCGCGATGTGGCCGAGGCCAA CAGGCTTGCGCCGGGTCTTGTGCCAGCCGCCGTGATGTCCACGCGCCTTGCGGTGGAGGCGGGCAACAAACGCCAGGCCG CAAAGACGATCCGCAAGGCCTGGGATCAAGCGCCGCATCCGGATCTGGCCGCCGCGTTCGCGCTGATTGAACCCGATGAG ACGCCTGCCCTGCGCCTGCGCCGCTTCCGTCCGCTTCTGGGCAAGCACCCGACCCACCCCGAGGTGAAGATGCTGGAGGC CGAGCTGCACATCGCCAACGAGGATTTCCCCGCCGCCCGCAAGGCCTTGGGTGATCTGGCAGAAAGTGCGCCCACCGCGC GGTCGTTGACGATCATGGCTGCCGTCGAGCGGGGCGAAGGCTCCCCGGACCGCATCGTGCGCGGCTGGCTGGCCCGCGCC GTCACTGCGCCCCGGGGCAACCAGTGGCTCTGCGACAACTGCGGTCATGTGCATGAGGATTGGACGCCGGTCTGCGTCAA TTGCGAGAGTTTCGACACGCTGGACTGGGCCGAGCCGCGTCAGTCGGAAACCTCCCTCGCGGGTCCCACCCAGATGCTGC CCCTGATCGTGGGCGCACTGGAGGATCAAAGCGATGCGCCCGAGGCAGCGCCCGAGGCAGGGCCTGACGCGGAAGAGGAG GCCGAGATACTCGACGACACACCCGCCGAGCCCGAAGCGGCCCAAGTCACGCCGGATCCCACGCCAGAGGCCGAGGTTTC ACGAAAGTAG
Upstream 100 bases:
>100_bases CGAAACCCGCGTCGCCGCCGACGCTGCTTTGGCGGAGCTCTCCGCCACGCAAGACAATTAAGGCCCCGTTGCCGGGCCCC CTCACTAAGGATCGCGCCAC
Downstream 100 bases:
>100_bases ACCAACTCCAATTTAGGTCTATCCAATCCGCGCGCGCCTTGCTATTAGCCCGCCCGGTACGCCGCTGTAGCTCAGATGGT AGAGCACATCATTCGTAATG
Product: HemY-like
Products: NA
Alternate protein names: HemY Domain Protein; HemY-Like; HemY Protein; HemY N-Terminal Domain Protein; Hypthetical Protein Contains N-Terminal HemY Domain; Signal Peptide; HemY Domain Membrane Protein
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MLLWSLLKIIIFIAIVVGAVFGITLLTEMDNLGILIIFGREFVITPLLAVIGAVILLLAVWILFKVVGLLVAFLRMLNGD ETALTRYWSRRSERKGYDALGDAMMALAAGEGRLAIRKAERARKALGRPELTNLVVAQGAEMVGDKALATETYKAMVTDD RTRFVGVRGLMQQRLDDGDTDTALKLAEKALVLRPKNADVQTTLISLQSRQEDWQGARGTLAAALKAGNVPRDLHRRRDA VLALAHARDAMAEGQVVTATRDVAEANRLAPGLVPAAVMSTRLAVEAGNKRQAAKTIRKAWDQAPHPDLAAAFALIEPDE TPALRLRRFRPLLGKHPTHPEVKMLEAELHIANEDFPAARKALGDLAESAPTARSLTIMAAVERGEGSPDRIVRGWLARA VTAPRGNQWLCDNCGHVHEDWTPVCVNCESFDTLDWAEPRQSETSLAGPTQMLPLIVGALEDQSDAPEAAPEAGPDAEEE AEILDDTPAEPEAAQVTPDPTPEAEVSRK
Sequences:
>Translated_509_residues MLLWSLLKIIIFIAIVVGAVFGITLLTEMDNLGILIIFGREFVITPLLAVIGAVILLLAVWILFKVVGLLVAFLRMLNGD ETALTRYWSRRSERKGYDALGDAMMALAAGEGRLAIRKAERARKALGRPELTNLVVAQGAEMVGDKALATETYKAMVTDD RTRFVGVRGLMQQRLDDGDTDTALKLAEKALVLRPKNADVQTTLISLQSRQEDWQGARGTLAAALKAGNVPRDLHRRRDA VLALAHARDAMAEGQVVTATRDVAEANRLAPGLVPAAVMSTRLAVEAGNKRQAAKTIRKAWDQAPHPDLAAAFALIEPDE TPALRLRRFRPLLGKHPTHPEVKMLEAELHIANEDFPAARKALGDLAESAPTARSLTIMAAVERGEGSPDRIVRGWLARA VTAPRGNQWLCDNCGHVHEDWTPVCVNCESFDTLDWAEPRQSETSLAGPTQMLPLIVGALEDQSDAPEAAPEAGPDAEEE AEILDDTPAEPEAAQVTPDPTPEAEVSRK >Mature_509_residues MLLWSLLKIIIFIAIVVGAVFGITLLTEMDNLGILIIFGREFVITPLLAVIGAVILLLAVWILFKVVGLLVAFLRMLNGD ETALTRYWSRRSERKGYDALGDAMMALAAGEGRLAIRKAERARKALGRPELTNLVVAQGAEMVGDKALATETYKAMVTDD RTRFVGVRGLMQQRLDDGDTDTALKLAEKALVLRPKNADVQTTLISLQSRQEDWQGARGTLAAALKAGNVPRDLHRRRDA VLALAHARDAMAEGQVVTATRDVAEANRLAPGLVPAAVMSTRLAVEAGNKRQAAKTIRKAWDQAPHPDLAAAFALIEPDE TPALRLRRFRPLLGKHPTHPEVKMLEAELHIANEDFPAARKALGDLAESAPTARSLTIMAAVERGEGSPDRIVRGWLARA VTAPRGNQWLCDNCGHVHEDWTPVCVNCESFDTLDWAEPRQSETSLAGPTQMLPLIVGALEDQSDAPEAAPEAGPDAEEE AEILDDTPAEPEAAQVTPDPTPEAEVSRK
Specific function: Unknown
COG id: COG3898
COG function: function code S; Uncharacterized membrane-bound protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55239; Mature: 55239
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLWSLLKIIIFIAIVVGAVFGITLLTEMDNLGILIIFGREFVITPLLAVIGAVILLLAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH WILFKVVGLLVAFLRMLNGDETALTRYWSRRSERKGYDALGDAMMALAAGEGRLAIRKAE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH RARKALGRPELTNLVVAQGAEMVGDKALATETYKAMVTDDRTRFVGVRGLMQQRLDDGDT HHHHHCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC DTALKLAEKALVLRPKNADVQTTLISLQSRQEDWQGARGTLAAALKAGNVPRDLHRRRDA HHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH VLALAHARDAMAEGQVVTATRDVAEANRLAPGLVPAAVMSTRLAVEAGNKRQAAKTIRKA HHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH WDQAPHPDLAAAFALIEPDETPALRLRRFRPLLGKHPTHPEVKMLEAELHIANEDFPAAR HCCCCCCCHHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHEECCCCCHHHH KALGDLAESAPTARSLTIMAAVERGEGSPDRIVRGWLARAVTAPRGNQWLCDNCGHVHED HHHHHHHHCCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC WTPVCVNCESFDTLDWAEPRQSETSLAGPTQMLPLIVGALEDQSDAPEAAPEAGPDAEEE CCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH AEILDDTPAEPEAAQVTPDPTPEAEVSRK HHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLWSLLKIIIFIAIVVGAVFGITLLTEMDNLGILIIFGREFVITPLLAVIGAVILLLAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH WILFKVVGLLVAFLRMLNGDETALTRYWSRRSERKGYDALGDAMMALAAGEGRLAIRKAE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH RARKALGRPELTNLVVAQGAEMVGDKALATETYKAMVTDDRTRFVGVRGLMQQRLDDGDT HHHHHCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC DTALKLAEKALVLRPKNADVQTTLISLQSRQEDWQGARGTLAAALKAGNVPRDLHRRRDA HHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH VLALAHARDAMAEGQVVTATRDVAEANRLAPGLVPAAVMSTRLAVEAGNKRQAAKTIRKA HHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH WDQAPHPDLAAAFALIEPDETPALRLRRFRPLLGKHPTHPEVKMLEAELHIANEDFPAAR HCCCCCCCHHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHEECCCCCHHHH KALGDLAESAPTARSLTIMAAVERGEGSPDRIVRGWLARAVTAPRGNQWLCDNCGHVHED HHHHHHHHCCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC WTPVCVNCESFDTLDWAEPRQSETSLAGPTQMLPLIVGALEDQSDAPEAAPEAGPDAEEE CCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH AEILDDTPAEPEAAQVTPDPTPEAEVSRK HHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA