| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is ahcY [H]
Identifier: 89056565
GI number: 89056565
Start: 4180682
End: 4182067
Strand: Direct
Name: ahcY [H]
Synonym: Jann_4074
Alternate gene names: 89056565
Gene position: 4180682-4182067 (Clockwise)
Preceding gene: 89056560
Following gene: 89056566
Centisome position: 96.82
GC content: 59.74
Gene sequence:
>1386_bases ATGGACGATTATATCGTAAAAGATATCGCGCTGGCCGAGTTTGGCCGCAAGGAACTGGACATTGCCGAAACGGAGATGCC CGGCTTGATGGCGCTGCGCGAGGAATATGGCGCGGAGAAGCCGCTCAAAGGCGCGCGGATTGTGGGCTCGCTCCACATGA CGATCCAGACGGCGGTTCTGATTGAAACGCTGGTCGATCTGGGCGCGGATGTCCGGTGGGCGTCGTGCAACATCTTCTCC ACCCAGGATCACGCGGCGGCGGCCATTGCCAAGGCGGGCGTGCCGGTCTTTGCGATCAAGGGCCAGTCGCTGGAGGAGCA TTGGGATTATCTGGATAAGTCTTTCATGTTTGAAGACGGCCCGAACCTGATCCTGGACGATGGCGGGGACGCGACGCTGT ATATCCTGTTGGGCGCGCGCGCCGAGGCGGGGGAAGATGTGATCGCCGTGCCCACATCCGAGGAAGAATTGGCGATCAAG GCGCAGATCAAGAAGCGGCTTGAGGCGTCCCCCGGTTGGTTCACCAAGATGAAAGAGCAGATCGTTGGCGTGTCGGAGGA GACGACGACCGGCGTGCACCGCCTCTATGACCTGCAAAAGAATGGCCAACTGCCGTTCCCTGCGATCAACGTGAATGACT CCGTGACCAAGTCGAAGTTCGACAACAAATACGGCTGCAAGGAATCGCTGGTCGACGGCATCCGCCGCGCCACGGACACG ATGATGGCCGGTAAGGTCGCCGTCGTGATGGGCTACGGCGATGTGGGCAAAGGCTCCGCCGCGTCTTTGGCCGGTGCCGG CGCGCGGGTGAAGGTGACGGAAGCGGATCCGATCTGCGCGTTGCAGGCGGCCATGGACGGGTTCGAGGTTGTGCTGCTGG AGGATGTGGTTGCCGACGCGGACGTCTTCATCACCACCACCGGAAACAAGGACGTGATCCGCATCGAGCATATGCGCGAG ATGAAGGACATGGCGATTGTCGGCAACATCGGCCATTTCGACAATGAGATCCAGGTTGCCGCCCTGAAAAACCACAAGTG GACCAATATCAAGGAACAGGTGGACATGATCGAGATGCCGTCTGGCAGCCGTTTGATCCTGTTGTCCGAGGGCCGTCTGC TGAACCTGGGCAACGCCACCGGGCACCCGTCCTTCGTGATGTCCGCGTCCTTCACCAACCAGGTGCTGGCGCAGATGGAG CTGTGGCTGCGGGGTGATGAGTACAAGAATGAGGTCTACATCCTGCCCAAGAAGCTCGACGAAAAGGTCGCGCGTCTGCA TCTGGCAAAAATCGGCGTGAAGCTGACCCAGCTGGATAAGGAACAGGCCGATTACATCGGTGTGCCACAGGATGGCCCGT TCAAGCCAGAGCATTACCGCTACTGA
Upstream 100 bases:
>100_bases TTGGCTAACGCTGACATTTGCGCCGCATTGCAGGGGTGGGGACAGGCTGGTATGGCACCGGCAAATACCGCTTTTGATGG ATGCCCGAGGAGGCAAGGAC
Downstream 100 bases:
>100_bases TCTGACAGGCGATTTGCTTGCAACGGCCGGTCCTTCAGGGGCCGGTCGTTTGCGTTCGAGGCTCAAGGTGATGCAACCGA TAGAGAAACGCGGCGCCGCG
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MDDYIVKDIALAEFGRKELDIAETEMPGLMALREEYGAEKPLKGARIVGSLHMTIQTAVLIETLVDLGADVRWASCNIFS TQDHAAAAIAKAGVPVFAIKGQSLEEHWDYLDKSFMFEDGPNLILDDGGDATLYILLGARAEAGEDVIAVPTSEEELAIK AQIKKRLEASPGWFTKMKEQIVGVSEETTTGVHRLYDLQKNGQLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRATDT MMAGKVAVVMGYGDVGKGSAASLAGAGARVKVTEADPICALQAAMDGFEVVLLEDVVADADVFITTTGNKDVIRIEHMRE MKDMAIVGNIGHFDNEIQVAALKNHKWTNIKEQVDMIEMPSGSRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQME LWLRGDEYKNEVYILPKKLDEKVARLHLAKIGVKLTQLDKEQADYIGVPQDGPFKPEHYRY
Sequences:
>Translated_461_residues MDDYIVKDIALAEFGRKELDIAETEMPGLMALREEYGAEKPLKGARIVGSLHMTIQTAVLIETLVDLGADVRWASCNIFS TQDHAAAAIAKAGVPVFAIKGQSLEEHWDYLDKSFMFEDGPNLILDDGGDATLYILLGARAEAGEDVIAVPTSEEELAIK AQIKKRLEASPGWFTKMKEQIVGVSEETTTGVHRLYDLQKNGQLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRATDT MMAGKVAVVMGYGDVGKGSAASLAGAGARVKVTEADPICALQAAMDGFEVVLLEDVVADADVFITTTGNKDVIRIEHMRE MKDMAIVGNIGHFDNEIQVAALKNHKWTNIKEQVDMIEMPSGSRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQME LWLRGDEYKNEVYILPKKLDEKVARLHLAKIGVKLTQLDKEQADYIGVPQDGPFKPEHYRY >Mature_461_residues MDDYIVKDIALAEFGRKELDIAETEMPGLMALREEYGAEKPLKGARIVGSLHMTIQTAVLIETLVDLGADVRWASCNIFS TQDHAAAAIAKAGVPVFAIKGQSLEEHWDYLDKSFMFEDGPNLILDDGGDATLYILLGARAEAGEDVIAVPTSEEELAIK AQIKKRLEASPGWFTKMKEQIVGVSEETTTGVHRLYDLQKNGQLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRATDT MMAGKVAVVMGYGDVGKGSAASLAGAGARVKVTEADPICALQAAMDGFEVVLLEDVVADADVFITTTGNKDVIRIEHMRE MKDMAIVGNIGHFDNEIQVAALKNHKWTNIKEQVDMIEMPSGSRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQME LWLRGDEYKNEVYILPKKLDEKVARLHLAKIGVKLTQLDKEQADYIGVPQDGPFKPEHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=461, Percent_Identity=59.002169197397, Blast_Score=509, Evalue=1e-144, Organism=Homo sapiens, GI239937451, Length=439, Percent_Identity=58.5421412300683, Blast_Score=482, Evalue=1e-136, Organism=Homo sapiens, GI298286489, Length=463, Percent_Identity=50.1079913606911, Blast_Score=450, Evalue=1e-126, Organism=Homo sapiens, GI24308043, Length=463, Percent_Identity=50.1079913606911, Blast_Score=450, Evalue=1e-126, Organism=Homo sapiens, GI195539337, Length=463, Percent_Identity=50.1079913606911, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI195539349, Length=463, Percent_Identity=50.1079913606911, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI21361647, Length=464, Percent_Identity=48.9224137931034, Blast_Score=421, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17506425, Length=465, Percent_Identity=57.6344086021505, Blast_Score=505, Evalue=1e-143, Organism=Saccharomyces cerevisiae, GI6320882, Length=478, Percent_Identity=56.6945606694561, Blast_Score=494, Evalue=1e-140, Organism=Drosophila melanogaster, GI24642172, Length=462, Percent_Identity=58.2251082251082, Blast_Score=509, Evalue=1e-144, Organism=Drosophila melanogaster, GI24656245, Length=464, Percent_Identity=48.9224137931034, Blast_Score=437, Evalue=1e-122, Organism=Drosophila melanogaster, GI45553387, Length=463, Percent_Identity=50.3239740820734, Blast_Score=427, Evalue=1e-119, Organism=Drosophila melanogaster, GI45553385, Length=462, Percent_Identity=50.2164502164502, Blast_Score=424, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 50591; Mature: 50591
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDYIVKDIALAEFGRKELDIAETEMPGLMALREEYGAEKPLKGARIVGSLHMTIQTAVL CCCHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHH IETLVDLGADVRWASCNIFSTQDHAAAAIAKAGVPVFAIKGQSLEEHWDYLDKSFMFEDG HHHHHHCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCEECCC PNLILDDGGDATLYILLGARAEAGEDVIAVPTSEEELAIKAQIKKRLEASPGWFTKMKEQ CCEEEECCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHH IVGVSEETTTGVHRLYDLQKNGQLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRATDT HCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHH MMAGKVAVVMGYGDVGKGSAASLAGAGARVKVTEADPICALQAAMDGFEVVLLEDVVADA HHCCCEEEEEECCCCCCCCCHHHCCCCCEEEEECCCCCHHHHHHCCCEEEEEEEHHHCCC DVFITTTGNKDVIRIEHMREMKDMAIVGNIGHFDNEIQVAALKNHKWTNIKEQVDMIEMP CEEEEECCCCCEEEHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHEEECC SGSRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQMELWLRGDEYKNEVYILPKKLD CCCEEEEEECCCEEECCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCEEEEECHHHH EKVARLHLAKIGVKLTQLDKEQADYIGVPQDGPFKPEHYRY HHHHHHHHHHHCEEHHHCCCHHCCEECCCCCCCCCCCCCCC >Mature Secondary Structure MDDYIVKDIALAEFGRKELDIAETEMPGLMALREEYGAEKPLKGARIVGSLHMTIQTAVL CCCHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHH IETLVDLGADVRWASCNIFSTQDHAAAAIAKAGVPVFAIKGQSLEEHWDYLDKSFMFEDG HHHHHHCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCEECCC PNLILDDGGDATLYILLGARAEAGEDVIAVPTSEEELAIKAQIKKRLEASPGWFTKMKEQ CCEEEECCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHH IVGVSEETTTGVHRLYDLQKNGQLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRATDT HCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHH MMAGKVAVVMGYGDVGKGSAASLAGAGARVKVTEADPICALQAAMDGFEVVLLEDVVADA HHCCCEEEEEECCCCCCCCCHHHCCCCCEEEEECCCCCHHHHHHCCCEEEEEEEHHHCCC DVFITTTGNKDVIRIEHMREMKDMAIVGNIGHFDNEIQVAALKNHKWTNIKEQVDMIEMP CEEEEECCCCCEEEHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHEEECC SGSRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQMELWLRGDEYKNEVYILPKKLD CCCEEEEEECCCEEECCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCEEEEECHHHH EKVARLHLAKIGVKLTQLDKEQADYIGVPQDGPFKPEHYRY HHHHHHHHHHHCEEHHHCCCHHCCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA