| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is ywrD [H]
Identifier: 89056545
GI number: 89056545
Start: 4157144
End: 4158712
Strand: Direct
Name: ywrD [H]
Synonym: Jann_4054
Alternate gene names: 89056545
Gene position: 4157144-4158712 (Clockwise)
Preceding gene: 89056544
Following gene: 89056547
Centisome position: 96.28
GC content: 64.56
Gene sequence:
>1569_bases ATGCGCGATTTTCACCAACCCGGACGGTCCACTGTCTATGCAGACCAGGGCATGTGCGCCACATCCCACCCGTTGGCCGC GCAAACCGCGATCTCTATCCTTCAACAGGGCGGGAACGCCGTGGATGCGGCCATCGGCGCCGCTATTTTGTTGGGTCTGT GTGAGCCCCAGAGCACCGGCATCGGCGGTGATATGTTCGCCCTTGTCGCGCAGCCCGATGGGGAGAACTTGGGCCTCAAC GCTTCGGGGCGCGCGCCTGCCGGCCTGAATGCGGACGCCATTCGCGCCAACCACGACACCATGCCGCTCTATGACATCAG CGCCATCACCGTGCCCGGCGCGATTGATGGATTTTGTCGTCTGCATGGCGACCACGGCCAATTGCCGCTGGACCAGGTGC TTGCCCCCTCCATCCATTATGCCGAGGCTGGAATTCCCATCGCGCCGCGCGTGGCGATGGATTACGCGACCTCCGGCCAT CTGCTGCAAGGCGCGGGGCGTCGGCATTACCTGCAGGATGACGCGCCCCTGCCCATTGGCGCGCGGTTCAAGGCCCCCGG TCAGGCCGAGGTGTTGCGCCGCATCGCCGAGCAAGGGCGCGCGGGCTTTTATGAAGGCGAAGTGCTGGACGACATGCTGG CGTCTCTTCAGGCGCATGGCGGCACCCATACGGCCGAGGATTTCGCCAACACCAAGTGCGATTACGTCACCCCGCTGCGG TCCGGTTACCGCGATGCGGAGCTGATTGAACTTCCGCCCAATGGTCAGGGGGCAACGGCGATGTTGATCCTCAACATCCT GGAAACGATGACGCCGCAAGACGACCCCTTCGGTCCTCAGCGCGCGCATCTGGAGGCCGAGGCGACCAAACTTGGCTATG ACGCCCGCGACCGGTTCCTGGCCGATCCCGATCACGTGACCCGTCTGGATCACATGCTGTCCAAGCAGACCGCCGCAGAC CTTGCCGCGCTGATTGATCCCAACGCCGCGATGCCCGATCCCCGCGCCGCGTCCGACAATGTTCACAAGGACACCGTCTA TCTCACCGTCGTCGACAAGGACCGCCGCGCCGTCAGCCTGATCTATTCGATTTTCCATTCATTTGGCTCCGGGATGGCCT CCGACAGATTCGGCATATTGTTTCAGAACCGGGGCGGCGGCTTCACGCTGGAGGCGGGCCACGCGAATGAGGCAGGTCCC GGCAAGCGCCCGATGCACACGATCATCCCCGGCATGTTGAAGCTGGCCGACGGGTCGCTGATGCCCTTCGGCGTCATGGG CGGGGCGTATCAGTCGACCGGCCACGCGCGGTTCGTGTCCAATTTGGTGGACTACGGTATGGACCCGCAGGCGGCCATCG ACGGCCCGCGCGCCTTTGCCGAGGCCGGAGCGCTGAAGATCGAGCGTGGCTATGGCGATGATACTCGCGACGATCTGGCC GCCAAGGGCCACACGCTTACCACGCCGGACACGCCGATTGGCGGGGCCCAGGCCATTCGCATTCGCCCCGACGGTGTGTT GGAAGGCGGCTCAGACCCCCGGAAGGACGGCATCGCGTTGGGGTATTAG
Upstream 100 bases:
>100_bases GACCTCTGCAGCCACATCTCTCCCCCGGAAAGACCGCACCAGACCTTGCCCCTGCGTCCCCGCGCATTAAGGTCTCCGCT CTAGTTGTCGGAGGGGACGT
Downstream 100 bases:
>100_bases GGACGTCGGTGGGGTACCGCCGCCCAAGCCCGCGCGCGCTTGGCACACCGGGTGGGCGGCACAGACCCTCTTATTGCCTG GGGCCGAAGATCCGACCAAG
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MRDFHQPGRSTVYADQGMCATSHPLAAQTAISILQQGGNAVDAAIGAAILLGLCEPQSTGIGGDMFALVAQPDGENLGLN ASGRAPAGLNADAIRANHDTMPLYDISAITVPGAIDGFCRLHGDHGQLPLDQVLAPSIHYAEAGIPIAPRVAMDYATSGH LLQGAGRRHYLQDDAPLPIGARFKAPGQAEVLRRIAEQGRAGFYEGEVLDDMLASLQAHGGTHTAEDFANTKCDYVTPLR SGYRDAELIELPPNGQGATAMLILNILETMTPQDDPFGPQRAHLEAEATKLGYDARDRFLADPDHVTRLDHMLSKQTAAD LAALIDPNAAMPDPRAASDNVHKDTVYLTVVDKDRRAVSLIYSIFHSFGSGMASDRFGILFQNRGGGFTLEAGHANEAGP GKRPMHTIIPGMLKLADGSLMPFGVMGGAYQSTGHARFVSNLVDYGMDPQAAIDGPRAFAEAGALKIERGYGDDTRDDLA AKGHTLTTPDTPIGGAQAIRIRPDGVLEGGSDPRKDGIALGY
Sequences:
>Translated_522_residues MRDFHQPGRSTVYADQGMCATSHPLAAQTAISILQQGGNAVDAAIGAAILLGLCEPQSTGIGGDMFALVAQPDGENLGLN ASGRAPAGLNADAIRANHDTMPLYDISAITVPGAIDGFCRLHGDHGQLPLDQVLAPSIHYAEAGIPIAPRVAMDYATSGH LLQGAGRRHYLQDDAPLPIGARFKAPGQAEVLRRIAEQGRAGFYEGEVLDDMLASLQAHGGTHTAEDFANTKCDYVTPLR SGYRDAELIELPPNGQGATAMLILNILETMTPQDDPFGPQRAHLEAEATKLGYDARDRFLADPDHVTRLDHMLSKQTAAD LAALIDPNAAMPDPRAASDNVHKDTVYLTVVDKDRRAVSLIYSIFHSFGSGMASDRFGILFQNRGGGFTLEAGHANEAGP GKRPMHTIIPGMLKLADGSLMPFGVMGGAYQSTGHARFVSNLVDYGMDPQAAIDGPRAFAEAGALKIERGYGDDTRDDLA AKGHTLTTPDTPIGGAQAIRIRPDGVLEGGSDPRKDGIALGY >Mature_522_residues MRDFHQPGRSTVYADQGMCATSHPLAAQTAISILQQGGNAVDAAIGAAILLGLCEPQSTGIGGDMFALVAQPDGENLGLN ASGRAPAGLNADAIRANHDTMPLYDISAITVPGAIDGFCRLHGDHGQLPLDQVLAPSIHYAEAGIPIAPRVAMDYATSGH LLQGAGRRHYLQDDAPLPIGARFKAPGQAEVLRRIAEQGRAGFYEGEVLDDMLASLQAHGGTHTAEDFANTKCDYVTPLR SGYRDAELIELPPNGQGATAMLILNILETMTPQDDPFGPQRAHLEAEATKLGYDARDRFLADPDHVTRLDHMLSKQTAAD LAALIDPNAAMPDPRAASDNVHKDTVYLTVVDKDRRAVSLIYSIFHSFGSGMASDRFGILFQNRGGGFTLEAGHANEAGP GKRPMHTIIPGMLKLADGSLMPFGVMGGAYQSTGHARFVSNLVDYGMDPQAAIDGPRAFAEAGALKIERGYGDDTRDDLA AKGHTLTTPDTPIGGAQAIRIRPDGVLEGGSDPRKDGIALGY
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=554, Percent_Identity=28.5198555956679, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI73915090, Length=554, Percent_Identity=28.5198555956679, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI73915096, Length=554, Percent_Identity=28.5198555956679, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI73915094, Length=554, Percent_Identity=28.5198555956679, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI113429324, Length=550, Percent_Identity=28.5454545454545, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI113429326, Length=555, Percent_Identity=28.1081081081081, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI153266885, Length=533, Percent_Identity=25.515947467167, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI109148539, Length=522, Percent_Identity=26.6283524904215, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI153266901, Length=534, Percent_Identity=25.4681647940075, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI153266907, Length=535, Percent_Identity=24.1121495327103, Blast_Score=102, Evalue=7e-22, Organism=Escherichia coli, GI1789856, Length=538, Percent_Identity=31.2267657992565, Blast_Score=226, Evalue=3e-60, Organism=Caenorhabditis elegans, GI212646519, Length=460, Percent_Identity=25.4347826086956, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI72000294, Length=460, Percent_Identity=25.8695652173913, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI193208247, Length=491, Percent_Identity=24.847250509165, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI193208245, Length=491, Percent_Identity=24.847250509165, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17506189, Length=557, Percent_Identity=24.5960502692998, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI161077878, Length=524, Percent_Identity=26.9083969465649, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI45551474, Length=524, Percent_Identity=26.9083969465649, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI161077880, Length=524, Percent_Identity=26.9083969465649, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24642670, Length=524, Percent_Identity=26.9083969465649, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24642666, Length=524, Percent_Identity=26.9083969465649, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI18859741, Length=511, Percent_Identity=25.6360078277886, Blast_Score=122, Evalue=7e-28, Organism=Drosophila melanogaster, GI18859893, Length=538, Percent_Identity=26.5799256505576, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI161077496, Length=444, Percent_Identity=25.2252252252252, Blast_Score=93, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 55166; Mature: 55166
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFHQPGRSTVYADQGMCATSHPLAAQTAISILQQGGNAVDAAIGAAILLGLCEPQSTG CCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC IGGDMFALVAQPDGENLGLNASGRAPAGLNADAIRANHDTMPLYDISAITVPGAIDGFCR CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECEEEECCCCCCCEEE LHGDHGQLPLDQVLAPSIHYAEAGIPIAPRVAMDYATSGHLLQGAGRRHYLQDDAPLPIG ECCCCCCCCHHHHHCCCCEECCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC ARFKAPGQAEVLRRIAEQGRAGFYEGEVLDDMLASLQAHGGTHTAEDFANTKCDYVTPLR CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCEECHHH SGYRDAELIELPPNGQGATAMLILNILETMTPQDDPFGPQRAHLEAEATKLGYDARDRFL CCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHCCCCHHHCCC ADPDHVTRLDHMLSKQTAADLAALIDPNAAMPDPRAASDNVHKDTVYLTVVDKDRRAVSL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHH IYSIFHSFGSGMASDRFGILFQNRGGGFTLEAGHANEAGPGKRPMHTIIPGMLKLADGSL HHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCC MPFGVMGGAYQSTGHARFVSNLVDYGMDPQAAIDGPRAFAEAGALKIERGYGDDTRDDLA CCHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHCCCEEEECCCCCCCHHHHH AKGHTLTTPDTPIGGAQAIRIRPDGVLEGGSDPRKDGIALGY HCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRDFHQPGRSTVYADQGMCATSHPLAAQTAISILQQGGNAVDAAIGAAILLGLCEPQSTG CCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC IGGDMFALVAQPDGENLGLNASGRAPAGLNADAIRANHDTMPLYDISAITVPGAIDGFCR CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECEEEECCCCCCCEEE LHGDHGQLPLDQVLAPSIHYAEAGIPIAPRVAMDYATSGHLLQGAGRRHYLQDDAPLPIG ECCCCCCCCHHHHHCCCCEECCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC ARFKAPGQAEVLRRIAEQGRAGFYEGEVLDDMLASLQAHGGTHTAEDFANTKCDYVTPLR CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCEECHHH SGYRDAELIELPPNGQGATAMLILNILETMTPQDDPFGPQRAHLEAEATKLGYDARDRFL CCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHCCCCHHHCCC ADPDHVTRLDHMLSKQTAADLAALIDPNAAMPDPRAASDNVHKDTVYLTVVDKDRRAVSL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHH IYSIFHSFGSGMASDRFGILFQNRGGGFTLEAGHANEAGPGKRPMHTIIPGMLKLADGSL HHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCC MPFGVMGGAYQSTGHARFVSNLVDYGMDPQAAIDGPRAFAEAGALKIERGYGDDTRDDLA CCHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHCCCEEEECCCCCCCHHHHH AKGHTLTTPDTPIGGAQAIRIRPDGVLEGGSDPRKDGIALGY HCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]