| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is mutL
Identifier: 89056538
GI number: 89056538
Start: 4150797
End: 4152629
Strand: Direct
Name: mutL
Synonym: Jann_4047
Alternate gene names: 89056538
Gene position: 4150797-4152629 (Clockwise)
Preceding gene: 89056537
Following gene: 89056539
Centisome position: 96.13
GC content: 65.63
Gene sequence:
>1833_bases ATGGCCCAAGCGCACCCCAACATATCCACAAACCCACGCCCGGTGATCCGTCAGCTGGACGAGGCTGCGATCAACCGCAT CGCGGCGGGGGAAGTGGTGGAACGCCCCGCCTCTGCTGTCAAAGAACTGGTGGAAAACGCGATAGATGCCGATGCGCGGC GCATCGTGATTGAGGTGGCCCACGGCGGCAAAACCCTGATCCGCGTGACAGATGACGGCTGCGGGATGGAGGCGGCGGAC CTGCCGCTGGCCCTGTCGCGCCACGCGACCTCCAAGATCGACGGCACAGATCTGCTCAATATCCATTCCTTCGGGTTTCG GGGGGAGGCGTTGCCGTCCCTGGGGTCTGTCGGGCGGTTGTCGATCACCTCGCGGGCATCGGATGCGGGCCACATGATCC GCGTGACCGGCGGTGCCCATGATGCCGTGAAGCCCGCCGCGCTGAACCGGGGCACTCTTGTGGAGCTGCGCGATCTCTTC TTCGCCACGCCCGCACGCCTGAAGTTCCTGCGCACGGATCGGGCCGAGATGCAGGCGATCACCGATGTGGTGAAGCGTCT GGCGATGGCGGAGCCTGCGGTAGGTTTCACGTTGAAAGACGTGAGTGACGGCGAACGGGTGACGTTCCGCGTCGACCCGG AACAGGGCGATCTGTTCGACGCGCTGCGGGGGCGGCTGACGGCGATCATGGGGCGTGACTTCACCGACAATGCGCTGGCG ATTGATGCGGAGCGCGAGGGGCTGCGGCTGACGGGCTACGCCGCCCTGCCCACCTATTCGCGCGGGTCAGCGGTGGCCCA ATTCCTGTTCGTGAATGGCAGGCCTGTACGGGACAAACTGCTGATCGGGGCGTTGCGCGCGGCATATATGGATGTATTGA GCCGCGACCGGCATCCGGCGGCGGTGTTGTTCATCGGCTGCCCGTCGGAGCGGGTGGATGTGAACGTGCATCCGGCGAAA TCTGAAGTGCGCTTCCGGGAACCTGGCGTTGCCCGATCCCTGATCGTGACGGGGCTGCGCCATGCACTGGCCGAAGCCGG ACACCGGGCCTCCTCCACCGTCGCGGACGCGACGCTGTCTGCCATGCAACCGGCTTATTCAGAGCCTCCTTCGGAACCTC TGGCTGCGCCGCGCATCTATCAGATGGACCGGTTGGGGCAGCAGCGGGGCTTTGCCCCTGTCCGGGGCCTGGAAGAAGCT GCACCGCAATGGTCCGCGCCATCGGCGCGCGTGGATGAGGCGGTGATCGACAGCGACGGCCCATTGGGGGCTGCGCGGGC GCAGGTCCATGAAAATTACATCATCGCGCAGACGCCAGGCGGGATTGTGTTGGTGGATCAGCACGCCGCCCATGAACGGT TGGTTTATGAGCGGTTGAAGACACAGATGGCAGAGCGGGGCGTGGCGCGGCAGGCGTTGTTAATCCCGGAGATCCTGACG CTGGGAGCTGATGCGGACCGCTTGCTGGACCACGCGGCGGAGTTGGAGCGGTTCGGTCTGGTGATTGAGGCGTTTGGCCC CGGCACCGTCGCCGTGCGCGAGACCCCCGCAATCCTGGGAGAGATCAACGCCGAGGCGCTGTTGCGCGACATCCTTGATG AGCTGTCCGATCTGGGCGACAGCCAGACGCTTCAGGCAAGGGTGGAGGCGGTGTTGTCCCGTGTCGCCTGCCACGGCTCC ATCCGGTCGGGCCGTCAGATGCGCGCCGATGAGATGAACGCGCTGCTGCGCGAGATGGAGGCCACGCCGCTGTCGGGCCA ATGCAACCACGGGCGGCCCACCTATGTGGAGCTGAAACTGGCCGATATCGAACGGCTGTTCGGGCGCACGTGA
Upstream 100 bases:
>100_bases TACGGATGGCCTGTAGGGGGGGCGACCCGCCGGACGATTCCGATGCCGGGCACATGGGAATCGGTTCCCCGGACATCCAT GTCATGCTACAGATAGCGTC
Downstream 100 bases:
>100_bases TACAGGTCGATGAGATCGTGGTGGATCTGAGCGATCCGATGACGCTGGCCGCCATAGCGGCGGGCGTTGTGTTTGTTGTG CTGATTGTCCTTGCTCTGCA
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MAQAHPNISTNPRPVIRQLDEAAINRIAAGEVVERPASAVKELVENAIDADARRIVIEVAHGGKTLIRVTDDGCGMEAAD LPLALSRHATSKIDGTDLLNIHSFGFRGEALPSLGSVGRLSITSRASDAGHMIRVTGGAHDAVKPAALNRGTLVELRDLF FATPARLKFLRTDRAEMQAITDVVKRLAMAEPAVGFTLKDVSDGERVTFRVDPEQGDLFDALRGRLTAIMGRDFTDNALA IDAEREGLRLTGYAALPTYSRGSAVAQFLFVNGRPVRDKLLIGALRAAYMDVLSRDRHPAAVLFIGCPSERVDVNVHPAK SEVRFREPGVARSLIVTGLRHALAEAGHRASSTVADATLSAMQPAYSEPPSEPLAAPRIYQMDRLGQQRGFAPVRGLEEA APQWSAPSARVDEAVIDSDGPLGAARAQVHENYIIAQTPGGIVLVDQHAAHERLVYERLKTQMAERGVARQALLIPEILT LGADADRLLDHAAELERFGLVIEAFGPGTVAVRETPAILGEINAEALLRDILDELSDLGDSQTLQARVEAVLSRVACHGS IRSGRQMRADEMNALLREMEATPLSGQCNHGRPTYVELKLADIERLFGRT
Sequences:
>Translated_610_residues MAQAHPNISTNPRPVIRQLDEAAINRIAAGEVVERPASAVKELVENAIDADARRIVIEVAHGGKTLIRVTDDGCGMEAAD LPLALSRHATSKIDGTDLLNIHSFGFRGEALPSLGSVGRLSITSRASDAGHMIRVTGGAHDAVKPAALNRGTLVELRDLF FATPARLKFLRTDRAEMQAITDVVKRLAMAEPAVGFTLKDVSDGERVTFRVDPEQGDLFDALRGRLTAIMGRDFTDNALA IDAEREGLRLTGYAALPTYSRGSAVAQFLFVNGRPVRDKLLIGALRAAYMDVLSRDRHPAAVLFIGCPSERVDVNVHPAK SEVRFREPGVARSLIVTGLRHALAEAGHRASSTVADATLSAMQPAYSEPPSEPLAAPRIYQMDRLGQQRGFAPVRGLEEA APQWSAPSARVDEAVIDSDGPLGAARAQVHENYIIAQTPGGIVLVDQHAAHERLVYERLKTQMAERGVARQALLIPEILT LGADADRLLDHAAELERFGLVIEAFGPGTVAVRETPAILGEINAEALLRDILDELSDLGDSQTLQARVEAVLSRVACHGS IRSGRQMRADEMNALLREMEATPLSGQCNHGRPTYVELKLADIERLFGRT >Mature_609_residues AQAHPNISTNPRPVIRQLDEAAINRIAAGEVVERPASAVKELVENAIDADARRIVIEVAHGGKTLIRVTDDGCGMEAADL PLALSRHATSKIDGTDLLNIHSFGFRGEALPSLGSVGRLSITSRASDAGHMIRVTGGAHDAVKPAALNRGTLVELRDLFF ATPARLKFLRTDRAEMQAITDVVKRLAMAEPAVGFTLKDVSDGERVTFRVDPEQGDLFDALRGRLTAIMGRDFTDNALAI DAEREGLRLTGYAALPTYSRGSAVAQFLFVNGRPVRDKLLIGALRAAYMDVLSRDRHPAAVLFIGCPSERVDVNVHPAKS EVRFREPGVARSLIVTGLRHALAEAGHRASSTVADATLSAMQPAYSEPPSEPLAAPRIYQMDRLGQQRGFAPVRGLEEAA PQWSAPSARVDEAVIDSDGPLGAARAQVHENYIIAQTPGGIVLVDQHAAHERLVYERLKTQMAERGVARQALLIPEILTL GADADRLLDHAAELERFGLVIEAFGPGTVAVRETPAILGEINAEALLRDILDELSDLGDSQTLQARVEAVLSRVACHGSI RSGRQMRADEMNALLREMEATPLSGQCNHGRPTYVELKLADIERLFGRT
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=318, Percent_Identity=35.8490566037736, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI4505913, Length=353, Percent_Identity=28.6118980169972, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI310128478, Length=353, Percent_Identity=28.6118980169972, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI4505911, Length=330, Percent_Identity=28.1818181818182, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI189458898, Length=330, Percent_Identity=28.1818181818182, Blast_Score=120, Evalue=5e-27, Organism=Homo sapiens, GI189458896, Length=318, Percent_Identity=27.9874213836478, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI263191589, Length=223, Percent_Identity=30.4932735426009, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI91992162, Length=350, Percent_Identity=24.8571428571429, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI91992160, Length=350, Percent_Identity=24.8571428571429, Blast_Score=79, Evalue=9e-15, Organism=Escherichia coli, GI1790612, Length=546, Percent_Identity=35.7142857142857, Blast_Score=254, Evalue=8e-69, Organism=Caenorhabditis elegans, GI71991825, Length=328, Percent_Identity=35.3658536585366, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17562796, Length=338, Percent_Identity=26.9230769230769, Blast_Score=117, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6323819, Length=371, Percent_Identity=32.3450134770889, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6324247, Length=333, Percent_Identity=28.2282282282282, Blast_Score=120, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6325093, Length=382, Percent_Identity=23.5602094240838, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI17136968, Length=324, Percent_Identity=34.8765432098765, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI17136970, Length=352, Percent_Identity=28.4090909090909, Blast_Score=99, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 65882; Mature: 65751
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAHPNISTNPRPVIRQLDEAAINRIAAGEVVERPASAVKELVENAIDADARRIVIEVA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE HGGKTLIRVTDDGCGMEAADLPLALSRHATSKIDGTDLLNIHSFGFRGEALPSLGSVGRL CCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEE SITSRASDAGHMIRVTGGAHDAVKPAALNRGTLVELRDLFFATPARLKFLRTDRAEMQAI EEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHH TDVVKRLAMAEPAVGFTLKDVSDGERVTFRVDPEQGDLFDALRGRLTAIMGRDFTDNALA HHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEE IDAEREGLRLTGYAALPTYSRGSAVAQFLFVNGRPVRDKLLIGALRAAYMDVLSRDRHPA EECCCCCEEEEEEEECCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCE AVLFIGCPSERVDVNVHPAKSEVRFREPGVARSLIVTGLRHALAEAGHRASSTVADATLS EEEEEECCCCCEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AMQPAYSEPPSEPLAAPRIYQMDRLGQQRGFAPVRGLEEAAPQWSAPSARVDEAVIDSDG HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCHHHHCCCCCCCCCHHCHHHCCCCC PLGAARAQVHENYIIAQTPGGIVLVDQHAAHERLVYERLKTQMAERGVARQALLIPEILT CCCHHHHHHHCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LGADADRLLDHAAELERFGLVIEAFGPGTVAVRETPAILGEINAEALLRDILDELSDLGD CCCCHHHHHHHHHHHHHHCEEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHCCC SQTLQARVEAVLSRVACHGSIRSGRQMRADEMNALLREMEATPLSGQCNHGRPTYVELKL CHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEH ADIERLFGRT HHHHHHHCCC >Mature Secondary Structure AQAHPNISTNPRPVIRQLDEAAINRIAAGEVVERPASAVKELVENAIDADARRIVIEVA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE HGGKTLIRVTDDGCGMEAADLPLALSRHATSKIDGTDLLNIHSFGFRGEALPSLGSVGRL CCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEE SITSRASDAGHMIRVTGGAHDAVKPAALNRGTLVELRDLFFATPARLKFLRTDRAEMQAI EEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHH TDVVKRLAMAEPAVGFTLKDVSDGERVTFRVDPEQGDLFDALRGRLTAIMGRDFTDNALA HHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEE IDAEREGLRLTGYAALPTYSRGSAVAQFLFVNGRPVRDKLLIGALRAAYMDVLSRDRHPA EECCCCCEEEEEEEECCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCE AVLFIGCPSERVDVNVHPAKSEVRFREPGVARSLIVTGLRHALAEAGHRASSTVADATLS EEEEEECCCCCEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AMQPAYSEPPSEPLAAPRIYQMDRLGQQRGFAPVRGLEEAAPQWSAPSARVDEAVIDSDG HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCHHHHCCCCCCCCCHHCHHHCCCCC PLGAARAQVHENYIIAQTPGGIVLVDQHAAHERLVYERLKTQMAERGVARQALLIPEILT CCCHHHHHHHCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LGADADRLLDHAAELERFGLVIEAFGPGTVAVRETPAILGEINAEALLRDILDELSDLGD CCCCHHHHHHHHHHHHHHCEEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHCCC SQTLQARVEAVLSRVACHGSIRSGRQMRADEMNALLREMEATPLSGQCNHGRPTYVELKL CHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEH ADIERLFGRT HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA