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The map label for this gene is ynjF [H]

Identifier: 89056379

GI number: 89056379

Start: 3985018

End: 3985665

Strand: Direct

Name: ynjF [H]

Synonym: Jann_3888

Alternate gene names: 89056379

Gene position: 3985018-3985665 (Clockwise)

Preceding gene: 89056378

Following gene: 89056382

Centisome position: 92.29

GC content: 64.2

Gene sequence:

>648_bases
TTGACGGGGCCACGGCTTCGGGCCAAGACGCGATCCATGATTGATGCCCGCCTTTTGCCCCTTCAACGCGCCCTGATGGA
GCCGCCCGCCCGATGGCTGGCGGCCTGTGGCGTGCGGGCGGATCAGATCACGCTGGTCGGGTGTGGGATCGGGCTTCTGG
CTGCTTTGGCGGCAGCACTGGGGCTGTATTGGCTGGCTCTTGCGGGCCTTGCCCTGAACCGTCTCGCCGATGGGTTGGAC
GGTGCCGTCGCACGGCTGACGACCCCTACCGATCGCGGGGCCTTCCTCGATATCGCGTTGGATTTCGTCTTCTACGCAGT
TTTCCCCATCGGCTTCATCTTCGCCGATCCGGCCTCCAACGGATTGCCCGGTGCAGTCCTGATCGCGAGCTTCGTGTTGA
CGGGCACGTCGTTTCTCGCCTTTTCCATCATCGCGGAGCGGCGCGGTTTGCTGGCCGAGAACTACCCGACCAAGGGCATC
TACTACCTGGGCGGCCTGGCGGAGGGGGCTGAGACCATCGCCGTCTTCGCTGCCTTGTGCCTGTTTCCGGACGCCTTCCC
GTGGATCGCTTGGGCGTTTGCAGCGATCTGCATCGTGACAGGCGCCACGCGCTACATGGCCGGATGGCAGGCTTTCGGGA
AAAACTAA

Upstream 100 bases:

>100_bases
GCTGGCGGCGTTGGGACTGGTCGCGCTGGTACCTTGCGGTGCCGCCCTGCTTCTCTGGCGGCTCCGAACCCCTCTCACGC
CGCGCTGACGGGTCTGTGCA

Downstream 100 bases:

>100_bases
CTTACCTTCAGCACGATCTTCCCAATATGCGCTGAGCTCTCCATACGGGCATGAGCATCCGCCGCGTTCTCCAGCGCAAA
GGTCTGGTCCATTACCGGCG

Product: CDP-alcohol phosphatidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MTGPRLRAKTRSMIDARLLPLQRALMEPPARWLAACGVRADQITLVGCGIGLLAALAAALGLYWLALAGLALNRLADGLD
GAVARLTTPTDRGAFLDIALDFVFYAVFPIGFIFADPASNGLPGAVLIASFVLTGTSFLAFSIIAERRGLLAENYPTKGI
YYLGGLAEGAETIAVFAALCLFPDAFPWIAWAFAAICIVTGATRYMAGWQAFGKN

Sequences:

>Translated_215_residues
MTGPRLRAKTRSMIDARLLPLQRALMEPPARWLAACGVRADQITLVGCGIGLLAALAAALGLYWLALAGLALNRLADGLD
GAVARLTTPTDRGAFLDIALDFVFYAVFPIGFIFADPASNGLPGAVLIASFVLTGTSFLAFSIIAERRGLLAENYPTKGI
YYLGGLAEGAETIAVFAALCLFPDAFPWIAWAFAAICIVTGATRYMAGWQAFGKN
>Mature_214_residues
TGPRLRAKTRSMIDARLLPLQRALMEPPARWLAACGVRADQITLVGCGIGLLAALAAALGLYWLALAGLALNRLADGLDG
AVARLTTPTDRGAFLDIALDFVFYAVFPIGFIFADPASNGLPGAVLIASFVLTGTSFLAFSIIAERRGLLAENYPTKGIY
YLGGLAEGAETIAVFAALCLFPDAFPWIAWAFAAICIVTGATRYMAGWQAFGKN

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=197, Percent_Identity=48.7309644670051, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: NA

Molecular weight: Translated: 22734; Mature: 22603

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPRLRAKTRSMIDARLLPLQRALMEPPARWLAACGVRADQITLVGCGIGLLAALAAAL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH
GLYWLALAGLALNRLADGLDGAVARLTTPTDRGAFLDIALDFVFYAVFPIGFIFADPASN
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCC
GLPGAVLIASFVLTGTSFLAFSIIAERRGLLAENYPTKGIYYLGGLAEGAETIAVFAALC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCHHHHHHHHHHHHHHH
LFPDAFPWIAWAFAAICIVTGATRYMAGWQAFGKN
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TGPRLRAKTRSMIDARLLPLQRALMEPPARWLAACGVRADQITLVGCGIGLLAALAAAL
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH
GLYWLALAGLALNRLADGLDGAVARLTTPTDRGAFLDIALDFVFYAVFPIGFIFADPASN
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCC
GLPGAVLIASFVLTGTSFLAFSIIAERRGLLAENYPTKGIYYLGGLAEGAETIAVFAALC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCHHHHHHHHHHHHHHH
LFPDAFPWIAWAFAAICIVTGATRYMAGWQAFGKN
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]