| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056372
Identifier: 89056372
GI number: 89056372
Start: 3979589
End: 3979945
Strand: Direct
Name: 89056372
Synonym: Jann_3881
Alternate gene names: NA
Gene position: 3979589-3979945 (Clockwise)
Preceding gene: 89056371
Following gene: 89056373
Centisome position: 92.16
GC content: 63.87
Gene sequence:
>357_bases ATGATGGAACCGCGTCTGCCCGGAATTTGGTACGCCAGCGACCGGCAGACGGCGTTCTTTCAGGTTCCCGATGGGGGCGA CGCCAAGGCAACGTTTCGCGCATTGTTCCAAGGGGTCTCCACGCCTCGGACGACCCAGGGCGGCGTGGTGGAAAACGGAT GTTTTCTGGTCACGCCAGATGGCGACGAATTCCAAGCCATCACGTGGCACGGTCGCCGCCTGGGCGCGTGGCGGCGCGAC TTTACGGACAGCACGCGAGCTCAAGGCATCATCACGGCGCGGTTCCATGGACGCCGCTTGATGGTGTCAGACGGGCGGCG ATACTGGTTTCGCGATCTCGTGGTGGAGCGGCGGTAG
Upstream 100 bases:
>100_bases GGAAGAAACGCCGGATGCCGAGACCTTCTTCAACCTGCCCGCGGGTGGCGGTGACGACGATGAAGACGGCGACGAGGATA AAGACGAAAGCTAAACTGTT
Downstream 100 bases:
>100_bases GCTGGCGAGACGGGCTATTTTCATCGGACTGATCTGCTACGCTGCAGCGATGATCCGTATTGCTGTCTTGCTCGCCCTGA CGGGCTTCACGGGCCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MMEPRLPGIWYASDRQTAFFQVPDGGDAKATFRALFQGVSTPRTTQGGVVENGCFLVTPDGDEFQAITWHGRRLGAWRRD FTDSTRAQGIITARFHGRRLMVSDGRRYWFRDLVVERR
Sequences:
>Translated_118_residues MMEPRLPGIWYASDRQTAFFQVPDGGDAKATFRALFQGVSTPRTTQGGVVENGCFLVTPDGDEFQAITWHGRRLGAWRRD FTDSTRAQGIITARFHGRRLMVSDGRRYWFRDLVVERR >Mature_118_residues MMEPRLPGIWYASDRQTAFFQVPDGGDAKATFRALFQGVSTPRTTQGGVVENGCFLVTPDGDEFQAITWHGRRLGAWRRD FTDSTRAQGIITARFHGRRLMVSDGRRYWFRDLVVERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13554; Mature: 13554
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEPRLPGIWYASDRQTAFFQVPDGGDAKATFRALFQGVSTPRTTQGGVVENGCFLVTPD CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCEEEECCC GDEFQAITWHGRRLGAWRRDFTDSTRAQGIITARFHGRRLMVSDGRRYWFRDLVVERR CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEEEHEEECCC >Mature Secondary Structure MMEPRLPGIWYASDRQTAFFQVPDGGDAKATFRALFQGVSTPRTTQGGVVENGCFLVTPD CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCEEEECCC GDEFQAITWHGRRLGAWRRDFTDSTRAQGIITARFHGRRLMVSDGRRYWFRDLVVERR CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEEEHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA