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The map label for this gene is recR

Identifier: 89056369

GI number: 89056369

Start: 3977057

End: 3977656

Strand: Direct

Name: recR

Synonym: Jann_3878

Alternate gene names: 89056369

Gene position: 3977057-3977656 (Clockwise)

Preceding gene: 89056368

Following gene: 89056371

Centisome position: 92.1

GC content: 63.5

Gene sequence:

>600_bases
TTGGCGGACACCTCCAAAGACATCGAAGAGCTGATCGGGATTATGGCACGCCTGCCGGGTCTTGGGCCACGGTCGGCTCG
GCGTGCGGTGCTGACGCTGATCAAGAAGCGTGGCGCTTTGATGCGTCCCTTGGCCGAGACCATGGCGCGCGTCGCCGAGA
GCGCGCGGGAATGTGTGAACTGCGGCAATATCGGCACGGGAGATCTCTGCGAGATCTGCATGGATGTCCGCCGCGCGACT
GGAGAGATCTGCGTCGTGGAGGACGTCGCAGATCTGTGGGCGATGGAACGAGGGCAGGCGTTCAAGGGCCGCTACCACGT
CCTGGGGGGAACATTATCGGCTTTGGATGATGTGGGTCCCGAGGACCTGCGCATCCCCAAACTGCGTGCGCGCATGGCCG
ATGAAGGGATCACCGAGGTCATCCTGGCGCTGAACGCGACGGTCGATGGCCAAACGACGGCGCATTACATCGCCGATGAG
CTGGCACCGACGGGCGTAACCCTGTCGTCGCTGGCACAGGGCGTGCCCATCGGCGGAGAGTTGGACTACCTTGACGATGG
CACCATTTCCGCAGCGTTGCGCGCGCGCAAAAGCCTGTGA

Upstream 100 bases:

>100_bases
CCCAAGACAAGCACAATGAAGAGATGCAGAAGATGACCGAAGAGCTCGGCCTGCCCGCGGGCATGAAGATGCCGTTCTGA
GGGACGGACGGGCGAAGGGC

Downstream 100 bases:

>100_bases
CCTAACCAAATTGCGCAGCAAAGCTGCATTCCATTTTTTATTTTGCGCGCGATGTGAGGGCGGGGTCATAGGTGAGCCGT
GTGCGCAAACGCATCCGGCG

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MADTSKDIEELIGIMARLPGLGPRSARRAVLTLIKKRGALMRPLAETMARVAESARECVNCGNIGTGDLCEICMDVRRAT
GEICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDDVGPEDLRIPKLRARMADEGITEVILALNATVDGQTTAHYIADE
LAPTGVTLSSLAQGVPIGGELDYLDDGTISAALRARKSL

Sequences:

>Translated_199_residues
MADTSKDIEELIGIMARLPGLGPRSARRAVLTLIKKRGALMRPLAETMARVAESARECVNCGNIGTGDLCEICMDVRRAT
GEICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDDVGPEDLRIPKLRARMADEGITEVILALNATVDGQTTAHYIADE
LAPTGVTLSSLAQGVPIGGELDYLDDGTISAALRARKSL
>Mature_198_residues
ADTSKDIEELIGIMARLPGLGPRSARRAVLTLIKKRGALMRPLAETMARVAESARECVNCGNIGTGDLCEICMDVRRATG
EICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDDVGPEDLRIPKLRARMADEGITEVILALNATVDGQTTAHYIADEL
APTGVTLSSLAQGVPIGGELDYLDDGTISAALRARKSL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=199, Percent_Identity=43.21608040201, Blast_Score=159, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_JANSC (Q28KG7)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_511820.1
- ProteinModelPortal:   Q28KG7
- SMR:   Q28KG7
- STRING:   Q28KG7
- GeneID:   3936359
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_3878
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   Q28KG7
- ProtClustDB:   PRK00076
- BioCyc:   JSP290400:JANN_3878-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21206; Mature: 21075

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTSKDIEELIGIMARLPGLGPRSARRAVLTLIKKRGALMRPLAETMARVAESARECVN
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
CGNIGTGDLCEICMDVRRATGEICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDDVGP
CCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHCCCCHHHCCHHHHHHCCCC
EDLRIPKLRARMADEGITEVILALNATVDGQTTAHYIADELAPTGVTLSSLAQGVPIGGE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCC
LDYLDDGTISAALRARKSL
CCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ADTSKDIEELIGIMARLPGLGPRSARRAVLTLIKKRGALMRPLAETMARVAESARECVN
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
CGNIGTGDLCEICMDVRRATGEICVVEDVADLWAMERGQAFKGRYHVLGGTLSALDDVGP
CCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHCCCCHHHCCHHHHHHCCCC
EDLRIPKLRARMADEGITEVILALNATVDGQTTAHYIADELAPTGVTLSSLAQGVPIGGE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCC
LDYLDDGTISAALRARKSL
CCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA