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The map label for this gene is dppC [H]

Identifier: 89056309

GI number: 89056309

Start: 3908370

End: 3909293

Strand: Direct

Name: dppC [H]

Synonym: Jann_3818

Alternate gene names: 89056309

Gene position: 3908370-3909293 (Clockwise)

Preceding gene: 89056308

Following gene: 89056310

Centisome position: 90.51

GC content: 61.69

Gene sequence:

>924_bases
ATGGGATTTCTCATGGGATTGGTGTGGTTGGTTGGCGTCATCGTGGCGGCGATGGCTGCCGGGTGGATCTTTCGCCAGAT
CTTGGTTCTGATCGCGCCAAAAGGCGTCGCCAAGGAACTCCGCACGGCGCCGATGACGGCGAGCTTCGGGATGCTGATGA
TCCTGATCTACATTCTGGTGGCCGTCTTCGCGCCCCTGATCGCGCCGTTCGGAGAGACAGTAGTCGTGGGTCGCGAATAT
GAGGCCTGGAGCGACGAATTCCTTCTGGGCACCGACAATCTGGGCCGCGACATGCTTTCGCGCCTCATCTACGCGGCGCG
CAACACAGTGGGCATCGCCTTCGTGACAACGGCCTTGGCGTTCATCATCGGGTCTGTTCTGGGCCTTCTGGCGGCCATCG
TCGGCGGGTGGCTGGATCAGATCCTGTCGCGCGCCGTGGACGTGCTGATGGCCATTCCGGCCCTGATCTTCGCTCTGCTG
CTGCTGACCATCGTCGGCACGTCGATCGTCAACATGATCATCGTTATCGCCCTGATCGACAGCACGCGGGTCTACCGTTT
GGCGCGGTCGGTGGCGATGAATATCGTTGTCATGGATTACGTGGAGGCGGCGAAACTGCGTGGTGAGGGGCTTTGGCGGC
TCATCACCCGCGAAATCCTGCCAAACGCCATGGCCCCGCTCGTGGCCGAGTTCGGCCTCCGGTTCTGCTTCGTGTTCCTG
ATGATCTCGGCCCTGTCGTTCCTGGGCCTCGGGATGCAACCGCCGACTGCGGACTGGGGCTCCATGGTGAAGGATAACGC
GACTCTGATCACCTTCGGAGACATCACGCCGCTGCTGCCTGCGGGCGCCATCGCGCTGCTGACGGTGAGCGTGAACTTCG
TCGTCGACTGGCAGCTTCACCGCGCCTCTGGTTTGAAGGAATAA

Upstream 100 bases:

>100_bases
TGTCTTCGCCGCCGCCTACGTGCTGCTGAACCTCACCGCGGATGTGTTGGCGACCTTGTCCAACCCCCGCCTCGTGCACC
GTCGCTGAGGGGGGCTGGAT

Downstream 100 bases:

>100_bases
TCTCATGTCTGACAAAGAAATCCTTCTGACCATCAAAGACCTGCGCATCGAAGGCCGCGCTGACGAGGAATGGCTGGAGA
TTGTGAAAGGCGTCGACCTG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MGFLMGLVWLVGVIVAAMAAGWIFRQILVLIAPKGVAKELRTAPMTASFGMLMILIYILVAVFAPLIAPFGETVVVGREY
EAWSDEFLLGTDNLGRDMLSRLIYAARNTVGIAFVTTALAFIIGSVLGLLAAIVGGWLDQILSRAVDVLMAIPALIFALL
LLTIVGTSIVNMIIVIALIDSTRVYRLARSVAMNIVVMDYVEAAKLRGEGLWRLITREILPNAMAPLVAEFGLRFCFVFL
MISALSFLGLGMQPPTADWGSMVKDNATLITFGDITPLLPAGAIALLTVSVNFVVDWQLHRASGLKE

Sequences:

>Translated_307_residues
MGFLMGLVWLVGVIVAAMAAGWIFRQILVLIAPKGVAKELRTAPMTASFGMLMILIYILVAVFAPLIAPFGETVVVGREY
EAWSDEFLLGTDNLGRDMLSRLIYAARNTVGIAFVTTALAFIIGSVLGLLAAIVGGWLDQILSRAVDVLMAIPALIFALL
LLTIVGTSIVNMIIVIALIDSTRVYRLARSVAMNIVVMDYVEAAKLRGEGLWRLITREILPNAMAPLVAEFGLRFCFVFL
MISALSFLGLGMQPPTADWGSMVKDNATLITFGDITPLLPAGAIALLTVSVNFVVDWQLHRASGLKE
>Mature_306_residues
GFLMGLVWLVGVIVAAMAAGWIFRQILVLIAPKGVAKELRTAPMTASFGMLMILIYILVAVFAPLIAPFGETVVVGREYE
AWSDEFLLGTDNLGRDMLSRLIYAARNTVGIAFVTTALAFIIGSVLGLLAAIVGGWLDQILSRAVDVLMAIPALIFALLL
LTIVGTSIVNMIIVIALIDSTRVYRLARSVAMNIVVMDYVEAAKLRGEGLWRLITREILPNAMAPLVAEFGLRFCFVFLM
ISALSFLGLGMQPPTADWGSMVKDNATLITFGDITPLLPAGAIALLTVSVNFVVDWQLHRASGLKE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=258, Percent_Identity=31.7829457364341, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1789964, Length=215, Percent_Identity=38.1395348837209, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787054, Length=266, Percent_Identity=30.0751879699248, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1787549, Length=245, Percent_Identity=35.1020408163265, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1789889, Length=211, Percent_Identity=31.7535545023697, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787498, Length=250, Percent_Identity=26.8, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788505, Length=169, Percent_Identity=27.2189349112426, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33157; Mature: 33026

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLMGLVWLVGVIVAAMAAGWIFRQILVLIAPKGVAKELRTAPMTASFGMLMILIYILV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
AVFAPLIAPFGETVVVGREYEAWSDEFLLGTDNLGRDMLSRLIYAARNTVGIAFVTTALA
HHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FIIGSVLGLLAAIVGGWLDQILSRAVDVLMAIPALIFALLLLTIVGTSIVNMIIVIALID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
STRVYRLARSVAMNIVVMDYVEAAKLRGEGLWRLITREILPNAMAPLVAEFGLRFCFVFL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
MISALSFLGLGMQPPTADWGSMVKDNATLITFGDITPLLPAGAIALLTVSVNFVVDWQLH
HHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEH
RASGLKE
HCCCCCC
>Mature Secondary Structure 
GFLMGLVWLVGVIVAAMAAGWIFRQILVLIAPKGVAKELRTAPMTASFGMLMILIYILV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
AVFAPLIAPFGETVVVGREYEAWSDEFLLGTDNLGRDMLSRLIYAARNTVGIAFVTTALA
HHHHHHHHCCCCEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FIIGSVLGLLAAIVGGWLDQILSRAVDVLMAIPALIFALLLLTIVGTSIVNMIIVIALID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
STRVYRLARSVAMNIVVMDYVEAAKLRGEGLWRLITREILPNAMAPLVAEFGLRFCFVFL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
MISALSFLGLGMQPPTADWGSMVKDNATLITFGDITPLLPAGAIALLTVSVNFVVDWQLH
HHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEH
RASGLKE
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]