| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89056277
Identifier: 89056277
GI number: 89056277
Start: 3869832
End: 3871343
Strand: Direct
Name: 89056277
Synonym: Jann_3786
Alternate gene names: NA
Gene position: 3869832-3871343 (Clockwise)
Preceding gene: 89056276
Following gene: 89056280
Centisome position: 89.62
GC content: 63.29
Gene sequence:
>1512_bases ATGGAAACCCTCGCGTCCCTCGGCCTCGGCTTTTCCGTGGCACTCCAGCCGCTGCATCTGGCTCTGCTGCTGTTCGGCTG TTTCGCAGGCACGCTGATCGGCGCAATGCCGGGGCTTGGCCCGGTCAACGGCGTGGCGATCCTGATCCCGCTGACCTTTG CCTTCGGGTTTGACGCAACGGCCTCGCTGATCCTTCTGTCCGCCGTCTATTTCGGCTGCATGTACGGGGGGCGCATCTCC TCGATCCTGCTCAACATTCCCGGCGACGAACCCGCAGTGATGACCACGCTGGACGGCTACCCGATGGCGCAACAGGGCCA TGCCGCCAACGCTTTGGCAATCTCCGGCGTGGCGTCCTTCGTGGGCGCGACCGTGGCCATCATCGGCCTGACCCTGTTCG CGCCGCTGCTCGCGCGGGCTGCCATCTACTTCGGCCCTGCGGATTACTTCGCGCTCTACGTCATGGCATTTGCCACCATT GGCGGGCTGGCGGGCGTGGACCCGCGCAAGACGCTGCTGTCTGCGCTGATCGGCCTGATGATCGCGACCATCGGTCTTGA CCCCGCCACAGGCATTCCCCGTTACACCAACGGCTCCTTTCACCTTTACGATGGCATTGATCCCATTGTCGCCCTTGTGG GATTGTTCGCGATATCCGAGCTGATGTTCCTTCTGGAGCGTGCCCTGAAAGACCGTGACCATGCGATCCGCCTGACCACA TGGATCCCTGATTTTCGCGTCGTTCTGTCGACGTCCTGGGCCACCGTGCGCGGCGCGGTGGTGGGATTCGTCGCGGGTGT TCTGCCCGGCGCGGGCGCGTCGCTTGGCGCGGTGATGAGCTATTCGATTGAAAAGCAGGTCAGCAACCGCGACGGCACAT TCGGCAAGGGCGATCCGCGTGGTGTGGCCGCGCCCGAGGCGGGCAACAACTCCGCCTCCGCCGGGGCGCTAATCCCGATG CTGTCGCTCGGCGTGCCCGGGTCTGGCACCACCGCCGTGATGCTGGCGATGCTGATCTCGCTCAACGTGCAGCCGGGACC GCTTCTGTTTGAGCGGCAGCCTGACCTCGTCTGGGGCCTTGTTGCCTCGCTCTACATGGCCAACGTCATGTTGCTCGTCC TCAACCTGCCACTGATCGGTCTGTTCACGCGGCTGATGGCGATCCCGACCTGGGCGTTGATGCCGCTGGTCGTGGCGATC AGCTTCATCGGCGTTTATTCGATCAGCAATTCGACCTTCGACCTGTACCTGATGGTCGGGTTCGGCGTTTTGGGCTACGT TCTGCGCAAATTGGATATCACGCTGGTGCCGCTTGTCCTGGGGCTTCTCCTGGGCGCGGATATGGAGAACAACCTGCGCC GGGCTTTGTCGATCTCGGGCGGGGATTATGGCGTCCTGATCAGCAGCTGGATCTCCATCGTACTCTACCTCGCGACGGTC GCGTTTCTGGCCTTGTCGGTCTGGCTTACCTGGCGCAACCGAGCGCAAAAGGACGGGCCAGTCGGCGAGTAA
Upstream 100 bases:
>100_bases CATCGGCATTGCCGGATCCCTGTCCCTGTGGGTTTTGTTTGATCGGCTACTGGGCTTGCCCATCGATTTTCTTGGCACCC TATTCGACGGATAGATCCCT
Downstream 100 bases:
>100_bases TACGTGTCAGGATCGTCCAAGATCCAGACGGTGCGCCATCGCGACAAGAACTATCGTCAAGTGGCCGTTGAGCTGCGACC CATCGGCACCTATCAGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues METLASLGLGFSVALQPLHLALLLFGCFAGTLIGAMPGLGPVNGVAILIPLTFAFGFDATASLILLSAVYFGCMYGGRIS SILLNIPGDEPAVMTTLDGYPMAQQGHAANALAISGVASFVGATVAIIGLTLFAPLLARAAIYFGPADYFALYVMAFATI GGLAGVDPRKTLLSALIGLMIATIGLDPATGIPRYTNGSFHLYDGIDPIVALVGLFAISELMFLLERALKDRDHAIRLTT WIPDFRVVLSTSWATVRGAVVGFVAGVLPGAGASLGAVMSYSIEKQVSNRDGTFGKGDPRGVAAPEAGNNSASAGALIPM LSLGVPGSGTTAVMLAMLISLNVQPGPLLFERQPDLVWGLVASLYMANVMLLVLNLPLIGLFTRLMAIPTWALMPLVVAI SFIGVYSISNSTFDLYLMVGFGVLGYVLRKLDITLVPLVLGLLLGADMENNLRRALSISGGDYGVLISSWISIVLYLATV AFLALSVWLTWRNRAQKDGPVGE
Sequences:
>Translated_503_residues METLASLGLGFSVALQPLHLALLLFGCFAGTLIGAMPGLGPVNGVAILIPLTFAFGFDATASLILLSAVYFGCMYGGRIS SILLNIPGDEPAVMTTLDGYPMAQQGHAANALAISGVASFVGATVAIIGLTLFAPLLARAAIYFGPADYFALYVMAFATI GGLAGVDPRKTLLSALIGLMIATIGLDPATGIPRYTNGSFHLYDGIDPIVALVGLFAISELMFLLERALKDRDHAIRLTT WIPDFRVVLSTSWATVRGAVVGFVAGVLPGAGASLGAVMSYSIEKQVSNRDGTFGKGDPRGVAAPEAGNNSASAGALIPM LSLGVPGSGTTAVMLAMLISLNVQPGPLLFERQPDLVWGLVASLYMANVMLLVLNLPLIGLFTRLMAIPTWALMPLVVAI SFIGVYSISNSTFDLYLMVGFGVLGYVLRKLDITLVPLVLGLLLGADMENNLRRALSISGGDYGVLISSWISIVLYLATV AFLALSVWLTWRNRAQKDGPVGE >Mature_503_residues METLASLGLGFSVALQPLHLALLLFGCFAGTLIGAMPGLGPVNGVAILIPLTFAFGFDATASLILLSAVYFGCMYGGRIS SILLNIPGDEPAVMTTLDGYPMAQQGHAANALAISGVASFVGATVAIIGLTLFAPLLARAAIYFGPADYFALYVMAFATI GGLAGVDPRKTLLSALIGLMIATIGLDPATGIPRYTNGSFHLYDGIDPIVALVGLFAISELMFLLERALKDRDHAIRLTT WIPDFRVVLSTSWATVRGAVVGFVAGVLPGAGASLGAVMSYSIEKQVSNRDGTFGKGDPRGVAAPEAGNNSASAGALIPM LSLGVPGSGTTAVMLAMLISLNVQPGPLLFERQPDLVWGLVASLYMANVMLLVLNLPLIGLFTRLMAIPTWALMPLVVAI SFIGVYSISNSTFDLYLMVGFGVLGYVLRKLDITLVPLVLGLLLGADMENNLRRALSISGGDYGVLISSWISIVLYLATV AFLALSVWLTWRNRAQKDGPVGE
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52660; Mature: 52660
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METLASLGLGFSVALQPLHLALLLFGCFAGTLIGAMPGLGPVNGVAILIPLTFAFGFDAT CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHCCCHH ASLILLSAVYFGCMYGGRISSILLNIPGDEPAVMTTLDGYPMAQQGHAANALAISGVASF HHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH VGATVAIIGLTLFAPLLARAAIYFGPADYFALYVMAFATIGGLAGVDPRKTLLSALIGLM HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH IATIGLDPATGIPRYTNGSFHLYDGIDPIVALVGLFAISELMFLLERALKDRDHAIRLTT HHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE WIPDFRVVLSTSWATVRGAVVGFVAGVLPGAGASLGAVMSYSIEKQVSNRDGTFGKGDPR ECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC GVAAPEAGNNSASAGALIPMLSLGVPGSGTTAVMLAMLISLNVQPGPLLFERQPDLVWGL CCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHH VASLYMANVMLLVLNLPLIGLFTRLMAIPTWALMPLVVAISFIGVYSISNSTFDLYLMVG HHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH FGVLGYVLRKLDITLVPLVLGLLLGADMENNLRRALSISGGDYGVLISSWISIVLYLATV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH AFLALSVWLTWRNRAQKDGPVGE HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure METLASLGLGFSVALQPLHLALLLFGCFAGTLIGAMPGLGPVNGVAILIPLTFAFGFDAT CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHCCCHH ASLILLSAVYFGCMYGGRISSILLNIPGDEPAVMTTLDGYPMAQQGHAANALAISGVASF HHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH VGATVAIIGLTLFAPLLARAAIYFGPADYFALYVMAFATIGGLAGVDPRKTLLSALIGLM HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH IATIGLDPATGIPRYTNGSFHLYDGIDPIVALVGLFAISELMFLLERALKDRDHAIRLTT HHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE WIPDFRVVLSTSWATVRGAVVGFVAGVLPGAGASLGAVMSYSIEKQVSNRDGTFGKGDPR ECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC GVAAPEAGNNSASAGALIPMLSLGVPGSGTTAVMLAMLISLNVQPGPLLFERQPDLVWGL CCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHH VASLYMANVMLLVLNLPLIGLFTRLMAIPTWALMPLVVAISFIGVYSISNSTFDLYLMVG HHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH FGVLGYVLRKLDITLVPLVLGLLLGADMENNLRRALSISGGDYGVLISSWISIVLYLATV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH AFLALSVWLTWRNRAQKDGPVGE HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]