Click here to switch to the map view.

The map label for this gene is 89056229

Identifier: 89056229

GI number: 89056229

Start: 3821213

End: 3821704

Strand: Direct

Name: 89056229

Synonym: Jann_3738

Alternate gene names: NA

Gene position: 3821213-3821704 (Clockwise)

Preceding gene: 89056227

Following gene: 89056230

Centisome position: 88.5

GC content: 57.32

Gene sequence:

>492_bases
ATGCGAAACCGAATGATTGCTTTAGCCCTAGAGCTTATGATGGGGCCGATTGCGCCCGCTTTTGCCCAAGAGGGAGAAGG
TCGGAGATTATCTGAACTCGCCTTCCAATCGCTGGATCGGGCGCAGCGCGGCTTTGTCGATCAAGGTGAATTCGTAAGCT
TCGGCAGCGACGTGTTCTTCTCCATCGACAACGATGCGGATGGGGCAATGACACTCGCCGAGTTCATGGACTGGGGCTTT
GGGATGGAGCAGGTGGCAGAGGCCGCCGACCGCACCAATGCCTATGAAACCGCCTTGCGCGTCGTCTTCGCCTTCTGGGA
TCTCAACGGAGACGGGTCCATTTCGCAGACCGAGCATCGACAGTCTCTTATGACGGATTTCCGCCGGGCAGACTTCGACC
ACGATGCACTTCTGACAGAAGAAGAGTTTCTGCACGGCTTCTCACTGCTGATCGCGGTGCGGGCGGCCATTGACCCAACC
CCAGTCGAGTAA

Upstream 100 bases:

>100_bases
CACAAGTGTTGCGGTTGTTTTAGCGTTTACAAGACTTACAAATGCAAGTTATGCATATGCATGTCAACTTGATTCGTTAC
TCACCAATGCGGAGGCTCCC

Downstream 100 bases:

>100_bases
TCGATCACCCAACGGAGGGGGCTGTCATGCTTCGCAAACAAGGACTGATCGCAATGGCCGTGGTCATTGGCCTATTCGTG
GTGCTGCATCTGGGGTTCGC

Product: signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRNRMIALALELMMGPIAPAFAQEGEGRRLSELAFQSLDRAQRGFVDQGEFVSFGSDVFFSIDNDADGAMTLAEFMDWGF
GMEQVAEAADRTNAYETALRVVFAFWDLNGDGSISQTEHRQSLMTDFRRADFDHDALLTEEEFLHGFSLLIAVRAAIDPT
PVE

Sequences:

>Translated_163_residues
MRNRMIALALELMMGPIAPAFAQEGEGRRLSELAFQSLDRAQRGFVDQGEFVSFGSDVFFSIDNDADGAMTLAEFMDWGF
GMEQVAEAADRTNAYETALRVVFAFWDLNGDGSISQTEHRQSLMTDFRRADFDHDALLTEEEFLHGFSLLIAVRAAIDPT
PVE
>Mature_163_residues
MRNRMIALALELMMGPIAPAFAQEGEGRRLSELAFQSLDRAQRGFVDQGEFVSFGSDVFFSIDNDADGAMTLAEFMDWGF
GMEQVAEAADRTNAYETALRVVFAFWDLNGDGSISQTEHRQSLMTDFRRADFDHDALLTEEEFLHGFSLLIAVRAAIDPT
PVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18211; Mature: 18211

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2 L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRMIALALELMMGPIAPAFAQEGEGRRLSELAFQSLDRAQRGFVDQGEFVSFGSDVFF
CCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEE
SIDNDADGAMTLAEFMDWGFGMEQVAEAADRTNAYETALRVVFAFWDLNGDGSISQTEHR
EECCCCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHH
QSLMTDFRRADFDHDALLTEEEFLHGFSLLIAVRAAIDPTPVE
HHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRNRMIALALELMMGPIAPAFAQEGEGRRLSELAFQSLDRAQRGFVDQGEFVSFGSDVFF
CCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEE
SIDNDADGAMTLAEFMDWGFGMEQVAEAADRTNAYETALRVVFAFWDLNGDGSISQTEHR
EECCCCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHH
QSLMTDFRRADFDHDALLTEEEFLHGFSLLIAVRAAIDPTPVE
HHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA