Click here to switch to the map view.

The map label for this gene is 89056216

Identifier: 89056216

GI number: 89056216

Start: 3809973

End: 3810443

Strand: Direct

Name: 89056216

Synonym: Jann_3725

Alternate gene names: NA

Gene position: 3809973-3810443 (Clockwise)

Preceding gene: 89056215

Following gene: 89056217

Centisome position: 88.24

GC content: 59.87

Gene sequence:

>471_bases
TTGTCACCCATTGTGCAACTCTTTGCGGTCGGTGCGCTTGCAATCGGCGCGGTCAGCATCATCAGCAAAGACATCCCTGA
CCTCGCCGTGCCTGAGGGACCCTGGCAAGCGGGCAGTGCGCTGGACGGGAGGGTCTTCTACACCACCGACAGGATCGTCG
GGTCCGACGAGATCCTGCGCGACGAATTGCACTTCATTGGCGGGCGATTTCAATCCGCGATGTGTCAAGAATACTGCGAT
TTCGGCTGGTCGGACTATCAGACCAAGCGGGTTGAGGGCACGATCCATTTCACGGTGACCACGCGATGCCCTGACGCTCC
GCACACGGTCGTCTGGTATGGCATCGTAGAAGGGGACGACATTCGCTTCGACGGAACATGGACCACGCGGCGATGGTACT
GGACGCATCAGATCGTCGTTGAAGGCCAGGGCTCAGCAATGGCCCCGGCAGATACGGTCACTGGCACGTGA

Upstream 100 bases:

>100_bases
CTTTTGGAGCGAGCGCCCGGTACCTCATCGCAACTGTCTGAGTGTGCAGCGCGAAGAACGAATGACCGTTCTCCCTGACC
TCGAACCTAAGGAGAGAACC

Downstream 100 bases:

>100_bases
GCACCTTGTTCAATCGTTTGGTGACCCCCGCGACCGCAAAGATCATGCTGCGCTTCGTTTTGCTTCTTGCTGTTGTAATT
GTCCTGACCTGGGGCGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSPIVQLFAVGALAIGAVSIISKDIPDLAVPEGPWQAGSALDGRVFYTTDRIVGSDEILRDELHFIGGRFQSAMCQEYCD
FGWSDYQTKRVEGTIHFTVTTRCPDAPHTVVWYGIVEGDDIRFDGTWTTRRWYWTHQIVVEGQGSAMAPADTVTGT

Sequences:

>Translated_156_residues
MSPIVQLFAVGALAIGAVSIISKDIPDLAVPEGPWQAGSALDGRVFYTTDRIVGSDEILRDELHFIGGRFQSAMCQEYCD
FGWSDYQTKRVEGTIHFTVTTRCPDAPHTVVWYGIVEGDDIRFDGTWTTRRWYWTHQIVVEGQGSAMAPADTVTGT
>Mature_155_residues
SPIVQLFAVGALAIGAVSIISKDIPDLAVPEGPWQAGSALDGRVFYTTDRIVGSDEILRDELHFIGGRFQSAMCQEYCDF
GWSDYQTKRVEGTIHFTVTTRCPDAPHTVVWYGIVEGDDIRFDGTWTTRRWYWTHQIVVEGQGSAMAPADTVTGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17276; Mature: 17144

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPIVQLFAVGALAIGAVSIISKDIPDLAVPEGPWQAGSALDGRVFYTTDRIVGSDEILR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCEECCHHHHH
DELHFIGGRFQSAMCQEYCDFGWSDYQTKRVEGTIHFTVTTRCPDAPHTVVWYGIVEGDD
HHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCE
IRFDGTWTTRRWYWTHQIVVEGQGSAMAPADTVTGT
EEECCCEECEEEEEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPIVQLFAVGALAIGAVSIISKDIPDLAVPEGPWQAGSALDGRVFYTTDRIVGSDEILR
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCEECCHHHHH
DELHFIGGRFQSAMCQEYCDFGWSDYQTKRVEGTIHFTVTTRCPDAPHTVVWYGIVEGDD
HHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCE
IRFDGTWTTRRWYWTHQIVVEGQGSAMAPADTVTGT
EEECCCEECEEEEEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA