Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056105

Identifier: 89056105

GI number: 89056105

Start: 3687564

End: 3688094

Strand: Direct

Name: 89056105

Synonym: Jann_3614

Alternate gene names: NA

Gene position: 3687564-3688094 (Clockwise)

Preceding gene: 89056104

Following gene: 89056109

Centisome position: 85.4

GC content: 61.39

Gene sequence:

>531_bases
ATGATTCAAACCGCAATCGACTCCACTTTGATCGGTATCTGGCTCCTGCCCGGGCAGCCGCAGACCTACGAGATCACCGA
GGACGGCAGCTATTACATCGCCGAAGCCGATGAAGCGCTGAGTTTTCAGGACGGCGGCGCCCAGATGATCTGGGGCGGGC
GTACATATACCCGCGTCATCGGCGAGGGGCTGACCCCCGTGGGCACATGGCGCGAGGACAACACCGGGGACGGCTGGGAC
TTCACCGATGATCGCGCCTACACAATCCTGAGCGCCACCGATGAGACCGGGGAAACCTTCACCGGTATCTGGGCCCTTCG
CAATGAGGGCACCAGCCTTTGGACCTGTGAAAAACAGGCCGATATCGAAACAGACGGCGCGCATATCACCTTCGTGACAC
CCTTGGGCGAGCGGTTCACCTATGGCTACGGTGTGGATGACGGCATTCTGACCCTGCTCGACCCGGACACCTGGCAGGAG
CTTACCCGCTACATCAGCGCGGAACGGATGGTGCGCAGCGCCGCCGGATAA

Upstream 100 bases:

>100_bases
CCACCTGACGGCGTCTGACCTTCTGGCATGATGGTCCCCGATCGCCCTCCGGGGCGCTTCTTCAATAGGCAGCACGAAAT
TTCCGTGCCATTCTGAGGAT

Downstream 100 bases:

>100_bases
GTGGCCGCCGACCGCGCCCGCTACCAGTGCATCGTGCCCATCGCGCCCTTGATCCTGCCCGTCAGGTTCGGGGTCACCCA
ACCGCCATAAAAGTCACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MIQTAIDSTLIGIWLLPGQPQTYEITEDGSYYIAEADEALSFQDGGAQMIWGGRTYTRVIGEGLTPVGTWREDNTGDGWD
FTDDRAYTILSATDETGETFTGIWALRNEGTSLWTCEKQADIETDGAHITFVTPLGERFTYGYGVDDGILTLLDPDTWQE
LTRYISAERMVRSAAG

Sequences:

>Translated_176_residues
MIQTAIDSTLIGIWLLPGQPQTYEITEDGSYYIAEADEALSFQDGGAQMIWGGRTYTRVIGEGLTPVGTWREDNTGDGWD
FTDDRAYTILSATDETGETFTGIWALRNEGTSLWTCEKQADIETDGAHITFVTPLGERFTYGYGVDDGILTLLDPDTWQE
LTRYISAERMVRSAAG
>Mature_176_residues
MIQTAIDSTLIGIWLLPGQPQTYEITEDGSYYIAEADEALSFQDGGAQMIWGGRTYTRVIGEGLTPVGTWREDNTGDGWD
FTDDRAYTILSATDETGETFTGIWALRNEGTSLWTCEKQADIETDGAHITFVTPLGERFTYGYGVDDGILTLLDPDTWQE
LTRYISAERMVRSAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19500; Mature: 19500

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQTAIDSTLIGIWLLPGQPQTYEITEDGSYYIAEADEALSFQDGGAQMIWGGRTYTRVI
CCCCCCCCEEEEEEEECCCCCEEEEECCCCEEEEECCCEEEECCCCEEEEECCCEEEHHH
GEGLTPVGTWREDNTGDGWDFTDDRAYTILSATDETGETFTGIWALRNEGTSLWTCEKQA
HCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEEECCCC
DIETDGAHITFVTPLGERFTYGYGVDDGILTLLDPDTWQELTRYISAERMVRSAAG
CCCCCCCEEEEECCCCCCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQTAIDSTLIGIWLLPGQPQTYEITEDGSYYIAEADEALSFQDGGAQMIWGGRTYTRVI
CCCCCCCCEEEEEEEECCCCCEEEEECCCCEEEEECCCEEEECCCCEEEEECCCEEEHHH
GEGLTPVGTWREDNTGDGWDFTDDRAYTILSATDETGETFTGIWALRNEGTSLWTCEKQA
HCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEEECCCC
DIETDGAHITFVTPLGERFTYGYGVDDGILTLLDPDTWQELTRYISAERMVRSAAG
CCCCCCCEEEEECCCCCCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA