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The map label for this gene is 89056072

Identifier: 89056072

GI number: 89056072

Start: 3658281

End: 3660386

Strand: Direct

Name: 89056072

Synonym: Jann_3581

Alternate gene names: NA

Gene position: 3658281-3660386 (Clockwise)

Preceding gene: 89056071

Following gene: 89056074

Centisome position: 84.72

GC content: 63.25

Gene sequence:

>2106_bases
ATGGACCATCAAGCGCAACAGCAGCTCAAGGCCTATCTTGAAGGGCTGATCCCCGAGGCGAAGCTGGACGCCATGGCCGA
CGATTCCGAGGCGCCGATGCGCATGGCAGGCACGCAGGAGATCAAGAAAACCAAAGCTGCCCGCGCCCAGGCTGCCTTGC
AGAAACTCGCCAGCAACCGCGACATCAACGACGAGGAGCAGTTCCTGATCGAGGCGATCATCCTGCCCGACAAGCGCCCT
GTCATCGATATCCGTAACGGCGGCTTCTCGGTCCAGCACCCGCTGTGGCTGAAATACAATGTCGACAAGGCGGTGGAAGA
TAACATTGAGCGCGCCATTCGGGGCGTGGGCCGGATCGAGGTGCCGATGCATCCCCAGATCCCCTATGCGGGCACCGGCT
TTCTGGTGGGTCACAACCTGATGATGACCAACCGCCACGTGGCGCAGCTGTTTGCAGAGGGGTTGGGCGATGGCCCGCTT
CGGTTCCAGGATGGGCAGACCGCCGCCATCGACTTCGTGCAAGAGGTGGGCAATGCGACCGCCCATACGATGCAGGTCAC
GCGTGTCCGCATGATCCATCCGTTCTGGGACATGGCCGTGTTGGAGGTCGAAGATGTGCCGCAGGGTGTGGAGCCGCTGG
CCCTCAGCCTTACCAATCCCGCCAATCTGCAGGGCCGCGATATCGCGGTCATCGGCTATCCGGCGTTCGATCATCGCAAC
AACGTCGCCGTGCAGAATGAGGTCTTTCGCGGCATCTACAACGTGAAACGCTTGCAGCCAGGCCTCCTAAAACCACGCGC
CGTGGTGTCGAGCTTCGGCAACCGTGTGGATACCGTGACCCACGATGCCTCCACCCTTGGCGGCAATTCCGGCAGTTGCG
TTCTGGATGTGACCAGCGGAGAGGTCGTGGCCCTCCACTTTGCGGGGCGCTACAAGGTCGCCAACTACGCCGTGCCCACG
TTCGAGCTGTCCCGCGACGCCCGCGTGGATGCCCTCCAGCTGGAGTTTGGCGAGGACGCCACAAGCAATGTGGAAGATCC
GGACCCCTGGCAGCCCTTCTGGGACACCACCGAAGCTGCGCGCCAAGGCGACGCGGGGTCCAGCGCGATCACCGTGCAAA
CGCCCACTGGGGCCGCAACCGGCGCGCGCTCCGTCTCCGTGACCATTCCTGTCACCGTCACCGTGGATATTGGCGCGCCG
TCGCACGCCACAGCCGCAGTTCCGATGCCCGCGACCGAGCGGATGGTGGAGCCAAAGCATGACCCGGACTACGCCCGCAA
ACCCGGCTATGACGCAGACTTTCTGGGCCTCGCCGTCCCGATGCCCAAACCCACCAACCCGGACGATCTGTCGACGCTGG
ATGATAGCTCAACGGTGCTTGACTATGTCCACTTCTCGCTCGTGATGAACAAACGCCGCCGCTTGGCGCAGATCTCCGCG
GCCAATGTGGACGCGAGCCCTGCCCGGGTCCGGCCCGAGCCGGGGCGCGATTATACCCGTGGCGGATTGAACGGCTTCAC
CTCCGGAAATGACCGTGAGCGGTGGTTCACCGACCCCCGAATCCTAGGGCAGCACCAACTGCCCGACAGGTTCTTCACCA
GGGATCGCACCGCATTTGACAAAGGCCACATCGTGCGTCGCAACGCGATTGTCTGGGGCGACACCTATGCAGAGGTGCAG
AATGCTAATGGCGACAGCTTCCACGTCACCAATTGCTCGCCGCAGGTGAAGGGCTTCAACCGGTCCAACCTCGGCGGGCT
CTGGGGCAGGCTGGAGAATGTCGTGCTGAAAGAGGCCGCGACCGAGCGGCTATGCGTCTTCGCGGGACCGATCCTGAAAG
ACGACGATCCGGTCTTTGTCGGGGTCGATGATGTCGGCGTGGCCGAGGTCCGCATCCCCCGCGCCTATTGGAAGGTGATC
GTGGCCGAGAGCGACGGCGCGCTTCAGGCGTTCGGGTATCTGCTGGAACAGGATCTCTCGGACGTGGATTTCGAGCTTCA
GCTAGCCCCGGAATGGCAGCGTCGGCTGACCCCCCTGGACAAGCTGCAAGACCGCATCGGAACGGTCACGTTCGACCCCG
TGATCCTCGCCGCCGATCAGGCGTAA

Upstream 100 bases:

>100_bases
CCACAATTACCGATATGCTGTTCCATATTCTGGGCGGACAGGCCCCCATTCCCGTCCAGATCGACGATTTGTCCGGATTT
TGACCCGAGGGAGGACCTCC

Downstream 100 bases:

>100_bases
CCTCAGCCCCCGTGCAGGAAGTGCAGCACGTCGCCATCCTTGACGACATACGCCTTGCCTTCCGCGCGCATCTTGCCCGC
GTCCTTGGCCGGGTTTTCGC

Product: DNA/RNA non-specific endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 701; Mature: 701

Protein sequence:

>701_residues
MDHQAQQQLKAYLEGLIPEAKLDAMADDSEAPMRMAGTQEIKKTKAARAQAALQKLASNRDINDEEQFLIEAIILPDKRP
VIDIRNGGFSVQHPLWLKYNVDKAVEDNIERAIRGVGRIEVPMHPQIPYAGTGFLVGHNLMMTNRHVAQLFAEGLGDGPL
RFQDGQTAAIDFVQEVGNATAHTMQVTRVRMIHPFWDMAVLEVEDVPQGVEPLALSLTNPANLQGRDIAVIGYPAFDHRN
NVAVQNEVFRGIYNVKRLQPGLLKPRAVVSSFGNRVDTVTHDASTLGGNSGSCVLDVTSGEVVALHFAGRYKVANYAVPT
FELSRDARVDALQLEFGEDATSNVEDPDPWQPFWDTTEAARQGDAGSSAITVQTPTGAATGARSVSVTIPVTVTVDIGAP
SHATAAVPMPATERMVEPKHDPDYARKPGYDADFLGLAVPMPKPTNPDDLSTLDDSSTVLDYVHFSLVMNKRRRLAQISA
ANVDASPARVRPEPGRDYTRGGLNGFTSGNDRERWFTDPRILGQHQLPDRFFTRDRTAFDKGHIVRRNAIVWGDTYAEVQ
NANGDSFHVTNCSPQVKGFNRSNLGGLWGRLENVVLKEAATERLCVFAGPILKDDDPVFVGVDDVGVAEVRIPRAYWKVI
VAESDGALQAFGYLLEQDLSDVDFELQLAPEWQRRLTPLDKLQDRIGTVTFDPVILAADQA

Sequences:

>Translated_701_residues
MDHQAQQQLKAYLEGLIPEAKLDAMADDSEAPMRMAGTQEIKKTKAARAQAALQKLASNRDINDEEQFLIEAIILPDKRP
VIDIRNGGFSVQHPLWLKYNVDKAVEDNIERAIRGVGRIEVPMHPQIPYAGTGFLVGHNLMMTNRHVAQLFAEGLGDGPL
RFQDGQTAAIDFVQEVGNATAHTMQVTRVRMIHPFWDMAVLEVEDVPQGVEPLALSLTNPANLQGRDIAVIGYPAFDHRN
NVAVQNEVFRGIYNVKRLQPGLLKPRAVVSSFGNRVDTVTHDASTLGGNSGSCVLDVTSGEVVALHFAGRYKVANYAVPT
FELSRDARVDALQLEFGEDATSNVEDPDPWQPFWDTTEAARQGDAGSSAITVQTPTGAATGARSVSVTIPVTVTVDIGAP
SHATAAVPMPATERMVEPKHDPDYARKPGYDADFLGLAVPMPKPTNPDDLSTLDDSSTVLDYVHFSLVMNKRRRLAQISA
ANVDASPARVRPEPGRDYTRGGLNGFTSGNDRERWFTDPRILGQHQLPDRFFTRDRTAFDKGHIVRRNAIVWGDTYAEVQ
NANGDSFHVTNCSPQVKGFNRSNLGGLWGRLENVVLKEAATERLCVFAGPILKDDDPVFVGVDDVGVAEVRIPRAYWKVI
VAESDGALQAFGYLLEQDLSDVDFELQLAPEWQRRLTPLDKLQDRIGTVTFDPVILAADQA
>Mature_701_residues
MDHQAQQQLKAYLEGLIPEAKLDAMADDSEAPMRMAGTQEIKKTKAARAQAALQKLASNRDINDEEQFLIEAIILPDKRP
VIDIRNGGFSVQHPLWLKYNVDKAVEDNIERAIRGVGRIEVPMHPQIPYAGTGFLVGHNLMMTNRHVAQLFAEGLGDGPL
RFQDGQTAAIDFVQEVGNATAHTMQVTRVRMIHPFWDMAVLEVEDVPQGVEPLALSLTNPANLQGRDIAVIGYPAFDHRN
NVAVQNEVFRGIYNVKRLQPGLLKPRAVVSSFGNRVDTVTHDASTLGGNSGSCVLDVTSGEVVALHFAGRYKVANYAVPT
FELSRDARVDALQLEFGEDATSNVEDPDPWQPFWDTTEAARQGDAGSSAITVQTPTGAATGARSVSVTIPVTVTVDIGAP
SHATAAVPMPATERMVEPKHDPDYARKPGYDADFLGLAVPMPKPTNPDDLSTLDDSSTVLDYVHFSLVMNKRRRLAQISA
ANVDASPARVRPEPGRDYTRGGLNGFTSGNDRERWFTDPRILGQHQLPDRFFTRDRTAFDKGHIVRRNAIVWGDTYAEVQ
NANGDSFHVTNCSPQVKGFNRSNLGGLWGRLENVVLKEAATERLCVFAGPILKDDDPVFVGVDDVGVAEVRIPRAYWKVI
VAESDGALQAFGYLLEQDLSDVDFELQLAPEWQRRLTPLDKLQDRIGTVTFDPVILAADQA

Specific function: Unknown

COG id: COG1864

COG function: function code F; DNA/RNA endonuclease G, NUC1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001604
- InterPro:   IPR020821
- InterPro:   IPR009003 [H]

Pfam domain/function: PF01223 Endonuclease_NS [H]

EC number: NA

Molecular weight: Translated: 76963; Mature: 76963

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHQAQQQLKAYLEGLIPEAKLDAMADDSEAPMRMAGTQEIKKTKAARAQAALQKLASNR
CCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCC
DINDEEQFLIEAIILPDKRPVIDIRNGGFSVQHPLWLKYNVDKAVEDNIERAIRGVGRIE
CCCHHHHEEEEEEECCCCCCEEEECCCCEEECCCEEEEECCCHHHHHHHHHHHHCCCEEE
VPMHPQIPYAGTGFLVGHNLMMTNRHVAQLFAEGLGDGPLRFQDGQTAAIDFVQEVGNAT
CCCCCCCCCCCCCEEEECEEEECCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCH
AHTMQVTRVRMIHPFWDMAVLEVEDVPQGVEPLALSLTNPANLQGRDIAVIGYPAFDHRN
HHEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCC
NVAVQNEVFRGIYNVKRLQPGLLKPRAVVSSFGNRVDTVTHDASTLGGNSGSCVLDVTSG
CEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEECCHHHCCCCCCCEEEEECCC
EVVALHFAGRYKVANYAVPTFELSRDARVDALQLEFGEDATSNVEDPDPWQPFWDTTEAA
CEEEEEECCCEEEEEEECCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHH
RQGDAGSSAITVQTPTGAATGARSVSVTIPVTVTVDIGAPSHATAAVPMPATERMVEPKH
HCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEECCCCCHHHHCCCCC
DPDYARKPGYDADFLGLAVPMPKPTNPDDLSTLDDSSTVLDYVHFSLVMNKRRRLAQISA
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ANVDASPARVRPEPGRDYTRGGLNGFTSGNDRERWFTDPRILGQHQLPDRFFTRDRTAFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHCCCCCCCHHHHHCCCCCCC
KGHIVRRNAIVWGDTYAEVQNANGDSFHVTNCSPQVKGFNRSNLGGLWGRLENVVLKEAA
CCCEEEECEEEECCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TERLCVFAGPILKDDDPVFVGVDDVGVAEVRIPRAYWKVIVAESDGALQAFGYLLEQDLS
HCCEEEEECCCCCCCCCEEEEECCCCEEEEEECCHHEEEEEECCCCHHHHHHHHHHHCCC
DVDFELQLAPEWQRRLTPLDKLQDRIGTVTFDPVILAADQA
CCCEEEEECCHHHHHCCCHHHHHHHHCCEEECCEEEEECCC
>Mature Secondary Structure
MDHQAQQQLKAYLEGLIPEAKLDAMADDSEAPMRMAGTQEIKKTKAARAQAALQKLASNR
CCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCC
DINDEEQFLIEAIILPDKRPVIDIRNGGFSVQHPLWLKYNVDKAVEDNIERAIRGVGRIE
CCCHHHHEEEEEEECCCCCCEEEECCCCEEECCCEEEEECCCHHHHHHHHHHHHCCCEEE
VPMHPQIPYAGTGFLVGHNLMMTNRHVAQLFAEGLGDGPLRFQDGQTAAIDFVQEVGNAT
CCCCCCCCCCCCCEEEECEEEECCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCH
AHTMQVTRVRMIHPFWDMAVLEVEDVPQGVEPLALSLTNPANLQGRDIAVIGYPAFDHRN
HHEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCC
NVAVQNEVFRGIYNVKRLQPGLLKPRAVVSSFGNRVDTVTHDASTLGGNSGSCVLDVTSG
CEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEECCHHHCCCCCCCEEEEECCC
EVVALHFAGRYKVANYAVPTFELSRDARVDALQLEFGEDATSNVEDPDPWQPFWDTTEAA
CEEEEEECCCEEEEEEECCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHH
RQGDAGSSAITVQTPTGAATGARSVSVTIPVTVTVDIGAPSHATAAVPMPATERMVEPKH
HCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEECCCCCHHHHCCCCC
DPDYARKPGYDADFLGLAVPMPKPTNPDDLSTLDDSSTVLDYVHFSLVMNKRRRLAQISA
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ANVDASPARVRPEPGRDYTRGGLNGFTSGNDRERWFTDPRILGQHQLPDRFFTRDRTAFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHCCCCCCCHHHHHCCCCCCC
KGHIVRRNAIVWGDTYAEVQNANGDSFHVTNCSPQVKGFNRSNLGGLWGRLENVVLKEAA
CCCEEEECEEEECCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
TERLCVFAGPILKDDDPVFVGVDDVGVAEVRIPRAYWKVIVAESDGALQAFGYLLEQDLS
HCCEEEEECCCCCCCCCEEEEECCCCEEEEEECCHHEEEEEECCCCHHHHHHHHHHHCCC
DVDFELQLAPEWQRRLTPLDKLQDRIGTVTFDPVILAADQA
CCCEEEEECCHHHHHCCCHHHHHHHHCCEEECCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]