| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056068
Identifier: 89056068
GI number: 89056068
Start: 3651991
End: 3653673
Strand: Direct
Name: 89056068
Synonym: Jann_3577
Alternate gene names: NA
Gene position: 3651991-3653673 (Clockwise)
Preceding gene: 89056067
Following gene: 89056069
Centisome position: 84.58
GC content: 61.44
Gene sequence:
>1683_bases ATGACCCGTGTATTGAACCTCAATGACATTCAGGGAAACGTGACCCGCGCCTATGGCCGCTATTCCTTTCCCTTCGCCCG GTACATTTTTTTCCATTTCCCGAGGCCCACGGCAGGGCGTGCGTTCCTGGAAGCGGTGCGCCAAAACGTGACCACGGCGG CGCGCTGGCCCTCGAAAGAGGCGCGCCCGAAATGCACCACCAACGTGGCGCTGACCTTTCCGGGTCTGCTGGCCCTGCAA TTGCCGGTGCGCACCCTTCAGGCGATGCCGGACGAGTTCATTGAAGGCATGCGGCAACGCGCCTTTATCCTGGGGGACCG CGACCAAACCCTGACCGAGGATGAGGCGGACGCCAAGGAGTGGAATGCCCATTGGGATGAAATCTGGCGGCGGAGCCGAG AGCCCGGGACGTTGGGGTTCGGCAAGGACGACGTCCATGTGATGGTCACGCTGAACGCCCAAAGCGAGAGTGACACGGTC CTTGATAAGCCCCACGCGGCTCTGGCCGAGCGGACCGAATGGCTTTTGCAGTCGGCCAGCGACATCGGCGTGACCCACCT TCAGGGCGTGGGTCAGACCGGCGACCAGCCCTATCAGGACGCCAGCGCGGTGTTTGAGGATGTGGGGGGGACCATGGTGC CCACGCCGAAGGAGCATTTCGGCTTCACCGATGGCATCGGCAATCCGGTCTTCGAGGGGCAATTACCGCTTGAGATTGAG GACACCGCCGTCATTGGCCGTGGCAAGCGCATGGGCAACGGGTGGGAGCCCTTGGCAACTGGAGAGTTCATTCTGGGTCA CCCCGACGAAAGCCAGGAACTGCCCCCCGTGGCGCGCCCGCCTGAATTTATGCACAACGGTACCTTCTTCGCCTTCCGCA AACTTCATGAAAATGTCGGCAGTTTTGATGCCGTGGTGAATGAAGAGGCCCGGCGCTATGCGGCCGTCATGGATATCCCG GTGGATGAGGCGGTGGAAACCATTCGCGCCAAGATGTGCGGCCGCTGGTCCGACGGTGTGCCGTTGCCCGTCGTGCCGGC CTACGCCGAGTGGATCAAATTTGGGGAGGACAAGGGCTGGCGCGGCGAGGATGTAGTGCCGTTTGAGGGCTACATGAAAA ACCTCGCCTATATCGCGTCCCCTGAGGCGCGGGACTTCCGCTATGCCGATGACATGGCGGGGCTGAAATGCCCCGGCGGC GCGCATATGCGGCGGGTGAATACGCGCGACTACCTCGATCCGGTCAACGAATCCGGCGTTACGGACGATGGCACCCAACC GGAAAACCCGGACGCGAAATCCTCGCTGAACAAACGTCGGCGCATCCTGCGGCGCGGTCTGCCCTATGGGACCGGACCTC TCGACAACAAGACCGACGACACGGAGCAGGGTGTCATCATGATCATCATGGGCGCGAGCCTGTTTCGGCAGTTCGAATTC GTGCAGCAGCAGTGGATCCAATACGGTCTCGATTTTCATCAGGGCAACAACACCTGCCCGATGCTCGGCAACCACGGGCA CCATACACGGTTCACAATTCCGTCCGATCCCACGACCGGGAAGCCACCCTATGTCATGAGCAAGCTCAAGACCTTCGTGG AATGTCGCGGCGGGGACTACTTCTTCGTCCCTTCCATGACAGCCCTTCGCATGATGGCCATGGGGATCGTTGACCCGACC TGA
Upstream 100 bases:
>100_bases CCGAACACGATCCCGACAACCGCCAAGTCCAGACCCAGAAACCCGGCGTCATTTCCTCCGCCGATCCCGAAAACGTCACA TTGAAAGACGCACATTCTTC
Downstream 100 bases:
>100_bases GCCACACGTCCCCGTTGTCCGAGGTCCCGCTATGATCACCGCCATCACCAACGTCTTCGTCACGATCTACCAACGTCTCG CCCTTTGGGCGGAGGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Dyp-Type Peroxidase Family Protein; Dyp-Type Peroxidase Family; Cytochrome; Dyp-Type Peroxidase; Peroxidase Family Protein; Iron-Dependent Peroxidase; Peroxidase Protein; Peroxidase-Like Protein
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MTRVLNLNDIQGNVTRAYGRYSFPFARYIFFHFPRPTAGRAFLEAVRQNVTTAARWPSKEARPKCTTNVALTFPGLLALQ LPVRTLQAMPDEFIEGMRQRAFILGDRDQTLTEDEADAKEWNAHWDEIWRRSREPGTLGFGKDDVHVMVTLNAQSESDTV LDKPHAALAERTEWLLQSASDIGVTHLQGVGQTGDQPYQDASAVFEDVGGTMVPTPKEHFGFTDGIGNPVFEGQLPLEIE DTAVIGRGKRMGNGWEPLATGEFILGHPDESQELPPVARPPEFMHNGTFFAFRKLHENVGSFDAVVNEEARRYAAVMDIP VDEAVETIRAKMCGRWSDGVPLPVVPAYAEWIKFGEDKGWRGEDVVPFEGYMKNLAYIASPEARDFRYADDMAGLKCPGG AHMRRVNTRDYLDPVNESGVTDDGTQPENPDAKSSLNKRRRILRRGLPYGTGPLDNKTDDTEQGVIMIIMGASLFRQFEF VQQQWIQYGLDFHQGNNTCPMLGNHGHHTRFTIPSDPTTGKPPYVMSKLKTFVECRGGDYFFVPSMTALRMMAMGIVDPT
Sequences:
>Translated_560_residues MTRVLNLNDIQGNVTRAYGRYSFPFARYIFFHFPRPTAGRAFLEAVRQNVTTAARWPSKEARPKCTTNVALTFPGLLALQ LPVRTLQAMPDEFIEGMRQRAFILGDRDQTLTEDEADAKEWNAHWDEIWRRSREPGTLGFGKDDVHVMVTLNAQSESDTV LDKPHAALAERTEWLLQSASDIGVTHLQGVGQTGDQPYQDASAVFEDVGGTMVPTPKEHFGFTDGIGNPVFEGQLPLEIE DTAVIGRGKRMGNGWEPLATGEFILGHPDESQELPPVARPPEFMHNGTFFAFRKLHENVGSFDAVVNEEARRYAAVMDIP VDEAVETIRAKMCGRWSDGVPLPVVPAYAEWIKFGEDKGWRGEDVVPFEGYMKNLAYIASPEARDFRYADDMAGLKCPGG AHMRRVNTRDYLDPVNESGVTDDGTQPENPDAKSSLNKRRRILRRGLPYGTGPLDNKTDDTEQGVIMIIMGASLFRQFEF VQQQWIQYGLDFHQGNNTCPMLGNHGHHTRFTIPSDPTTGKPPYVMSKLKTFVECRGGDYFFVPSMTALRMMAMGIVDPT >Mature_559_residues TRVLNLNDIQGNVTRAYGRYSFPFARYIFFHFPRPTAGRAFLEAVRQNVTTAARWPSKEARPKCTTNVALTFPGLLALQL PVRTLQAMPDEFIEGMRQRAFILGDRDQTLTEDEADAKEWNAHWDEIWRRSREPGTLGFGKDDVHVMVTLNAQSESDTVL DKPHAALAERTEWLLQSASDIGVTHLQGVGQTGDQPYQDASAVFEDVGGTMVPTPKEHFGFTDGIGNPVFEGQLPLEIED TAVIGRGKRMGNGWEPLATGEFILGHPDESQELPPVARPPEFMHNGTFFAFRKLHENVGSFDAVVNEEARRYAAVMDIPV DEAVETIRAKMCGRWSDGVPLPVVPAYAEWIKFGEDKGWRGEDVVPFEGYMKNLAYIASPEARDFRYADDMAGLKCPGGA HMRRVNTRDYLDPVNESGVTDDGTQPENPDAKSSLNKRRRILRRGLPYGTGPLDNKTDDTEQGVIMIIMGASLFRQFEFV QQQWIQYGLDFHQGNNTCPMLGNHGHHTRFTIPSDPTTGKPPYVMSKLKTFVECRGGDYFFVPSMTALRMMAMGIVDPT
Specific function: Unknown
COG id: COG2837
COG function: function code P; Predicted iron-dependent peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62699; Mature: 62568
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVLNLNDIQGNVTRAYGRYSFPFARYIFFHFPRPTAGRAFLEAVRQNVTTAARWPSKE CCEEECCCCCCCCHHHHCCCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC ARPKCTTNVALTFPGLLALQLPVRTLQAMPDEFIEGMRQRAFILGDRDQTLTEDEADAKE CCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCCCCCCCCCHHH WNAHWDEIWRRSREPGTLGFGKDDVHVMVTLNAQSESDTVLDKPHAALAERTEWLLQSAS HCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHH DIGVTHLQGVGQTGDQPYQDASAVFEDVGGTMVPTPKEHFGFTDGIGNPVFEGQLPLEIE HCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEC DTAVIGRGKRMGNGWEPLATGEFILGHPDESQELPPVARPPEFMHNGTFFAFRKLHENVG CCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC SFDAVVNEEARRYAAVMDIPVDEAVETIRAKMCGRWSDGVPLPVVPAYAEWIKFGEDKGW HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC RGEDVVPFEGYMKNLAYIASPEARDFRYADDMAGLKCPGGAHMRRVNTRDYLDPVNESGV CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCEEECCCHHHCCCCCCCCC TDDGTQPENPDAKSSLNKRRRILRRGLPYGTGPLDNKTDDTEQGVIMIIMGASLFRQFEF CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHH VQQQWIQYGLDFHQGNNTCPMLGNHGHHTRFTIPSDPTTGKPPYVMSKLKTFVECRGGDY HHHHHHHHCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCE FFVPSMTALRMMAMGIVDPT EECCCHHHHHHHHHHCCCCC >Mature Secondary Structure TRVLNLNDIQGNVTRAYGRYSFPFARYIFFHFPRPTAGRAFLEAVRQNVTTAARWPSKE CEEECCCCCCCCHHHHCCCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC ARPKCTTNVALTFPGLLALQLPVRTLQAMPDEFIEGMRQRAFILGDRDQTLTEDEADAKE CCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCCCCCCCCCHHH WNAHWDEIWRRSREPGTLGFGKDDVHVMVTLNAQSESDTVLDKPHAALAERTEWLLQSAS HCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHH DIGVTHLQGVGQTGDQPYQDASAVFEDVGGTMVPTPKEHFGFTDGIGNPVFEGQLPLEIE HCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEC DTAVIGRGKRMGNGWEPLATGEFILGHPDESQELPPVARPPEFMHNGTFFAFRKLHENVG CCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC SFDAVVNEEARRYAAVMDIPVDEAVETIRAKMCGRWSDGVPLPVVPAYAEWIKFGEDKGW HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC RGEDVVPFEGYMKNLAYIASPEARDFRYADDMAGLKCPGGAHMRRVNTRDYLDPVNESGV CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCEEECCCHHHCCCCCCCCC TDDGTQPENPDAKSSLNKRRRILRRGLPYGTGPLDNKTDDTEQGVIMIIMGASLFRQFEF CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHH VQQQWIQYGLDFHQGNNTCPMLGNHGHHTRFTIPSDPTTGKPPYVMSKLKTFVECRGGDY HHHHHHHHCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCE FFVPSMTALRMMAMGIVDPT EECCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA