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The map label for this gene is 89056009

Identifier: 89056009

GI number: 89056009

Start: 3575092

End: 3575727

Strand: Direct

Name: 89056009

Synonym: Jann_3518

Alternate gene names: NA

Gene position: 3575092-3575727 (Clockwise)

Preceding gene: 89056008

Following gene: 89056010

Centisome position: 82.8

GC content: 62.42

Gene sequence:

>636_bases
ATGGCCGTGGGATCCCTTGTCCTGACCGACGACAGTCGCATCAGCCGCCTCGACCAGGCGCTGCACAAGCTGGAACTTGT
CACAATCATCATCGGCGGGCTGACCGTCTTTGCCCTGATGCTGCTCGCTGTCTTCTCCGTCGGCGGGCGGAACTTCTTCA
ACGCACCTCTGCCCGGCTATGTCGATTGGATCGAGCAGTTGATGCCGGTGATCGCCATCCTTGGTGTCGCCTATGTTAGC
CGCGAGGGGGGGCATATCCGCATGGATATTCTGGTCGGCATGCTCAAGGGTCGCGCGCTTTGGGCGGCAGAGTTCGTCAC
GACACTGGCCATCTTCATCTTCGCGCTGTTGCTTCTTTGGGGCAGCTGGACCCACTTCGACCGCAGCTTTGAGTTTGGCC
AGCCGATGTGGTCGCGTGACAGTTCCATGGACATTGGCCTGCCGATCTGGCCCGCGAAACTGGTGGTGCCCTTCGCGCTC
TGCATCCTGAACCTGCGCCTCATCCTGCAACTCTGGGCCTACGGCACCGCGTTCGCGACCAACGCCGAGCGCCCCGTGGC
CGTTCCACTTGTGGCCGATGTCGCCACCCAAGCCGCGATGGAGGCCAGGCAGGTCTCCGGTCGCGACGACGTTTGA

Upstream 100 bases:

>100_bases
GCATGATCGCCGAGGCAAACTAAACCCACCACAAGACAAGGCGCGCCGCTGACCGTCGGCGCGCCCTTCCCCTTTTCAAA
CGCATCTAGGGAGGTTCCCG

Downstream 100 bases:

>100_bases
GGGCCCGACCGATGGAACCCATTACAATTGGCCTCTACGTCACCGGTGGTTTGCTGCTGTTTGTTATTCTTGGCATGCGC
GTGGCCTTTGCGGCGGGTAT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: Tripartite ATP-Independent Periplasmic Transporter DctQ; TRAP Dicarboxylate Transporter DctQ Subunit; TRAP Transporter DctQ-Like Membrane Protein

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MAVGSLVLTDDSRISRLDQALHKLELVTIIIGGLTVFALMLLAVFSVGGRNFFNAPLPGYVDWIEQLMPVIAILGVAYVS
REGGHIRMDILVGMLKGRALWAAEFVTTLAIFIFALLLLWGSWTHFDRSFEFGQPMWSRDSSMDIGLPIWPAKLVVPFAL
CILNLRLILQLWAYGTAFATNAERPVAVPLVADVATQAAMEARQVSGRDDV

Sequences:

>Translated_211_residues
MAVGSLVLTDDSRISRLDQALHKLELVTIIIGGLTVFALMLLAVFSVGGRNFFNAPLPGYVDWIEQLMPVIAILGVAYVS
REGGHIRMDILVGMLKGRALWAAEFVTTLAIFIFALLLLWGSWTHFDRSFEFGQPMWSRDSSMDIGLPIWPAKLVVPFAL
CILNLRLILQLWAYGTAFATNAERPVAVPLVADVATQAAMEARQVSGRDDV
>Mature_210_residues
AVGSLVLTDDSRISRLDQALHKLELVTIIIGGLTVFALMLLAVFSVGGRNFFNAPLPGYVDWIEQLMPVIAILGVAYVSR
EGGHIRMDILVGMLKGRALWAAEFVTTLAIFIFALLLLWGSWTHFDRSFEFGQPMWSRDSSMDIGLPIWPAKLVVPFALC
ILNLRLILQLWAYGTAFATNAERPVAVPLVADVATQAAMEARQVSGRDDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23231; Mature: 23100

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVGSLVLTDDSRISRLDQALHKLELVTIIIGGLTVFALMLLAVFSVGGRNFFNAPLPGY
CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
VDWIEQLMPVIAILGVAYVSREGGHIRMDILVGMLKGRALWAAEFVTTLAIFIFALLLLW
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GSWTHFDRSFEFGQPMWSRDSSMDIGLPIWPAKLVVPFALCILNLRLILQLWAYGTAFAT
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NAERPVAVPLVADVATQAAMEARQVSGRDDV
CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AVGSLVLTDDSRISRLDQALHKLELVTIIIGGLTVFALMLLAVFSVGGRNFFNAPLPGY
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
VDWIEQLMPVIAILGVAYVSREGGHIRMDILVGMLKGRALWAAEFVTTLAIFIFALLLLW
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GSWTHFDRSFEFGQPMWSRDSSMDIGLPIWPAKLVVPFALCILNLRLILQLWAYGTAFAT
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NAERPVAVPLVADVATQAAMEARQVSGRDDV
CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA